Cotesia glomerata: 123260116
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Entry
123260116 CDS
T07738
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123260116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123260116
03036 Chromosome and associated proteins [BR:
cglo03036
]
123260116
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123260116
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123260116
mRNA degradation factors
5'-3' decay
Decapping complex
123260116
Chromosome and associated proteins [BR:
cglo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123260116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
CMS1
DS
Motif
Other DBs
NCBI-GeneID:
123260116
NCBI-ProteinID:
XP_044577003
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All DBs
Position
LG2:complement(5523577..5530837)
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AA seq
444 aa
AA seq
DB search
MMTETHINSNHMLSSSLGSKSDLEKMDDVGWKSKLRIPPRDKRIKTSDVTNTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDIIQALVIVPTRELALQTSQICIELAKHMDVKVMVTTGGTNLRDDIMRIYQKVHVIIAT
PGRILDLMDKNVANMDHCRILVLDEADKLLSQDFKGMLDHVISRLPSERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNTSLDEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacgcatattaattctaatcacatgctgagctcaagtttgggctccaaa
tcagacctcgagaaaatggatgatgttggttggaaatccaaacttagaattccaccgcga
gacaagcggattaaaacgagtgatgttacaaacacacgaggtaacgaatttgaggagttt
tgtttaaaacgtgaattattgatgggaattttcgagaaaggatgggaaaagccatctcct
attcaagaagctagtattccaattgcattgtccggtaaagacattttagcacgtgctaag
aatggtacaggaaagaccggagcttactctattcctgtattggaacaggttgacccacga
aaagacataattcaagctttagtgatagtgcctactcgagagttggcattgcagacatct
caaatctgtattgaacttgctaaacacatggatgttaaagttatggtaactactggtgga
acaaatttacgtgacgatattatgaggatttatcaaaaagttcacgtaattatcgcaaca
ccaggaagaattctcgacttgatggacaaaaatgtcgcaaacatggatcactgcaggatt
ttagtactagatgaggctgacaaacttctctcacaagattttaaaggaatgttggatcac
gttatttcaagattgccatcggaacgacaaatattgctgtactcggctacgttcccactg
accgttaagcaattcatggaaaaacacttgagagatccatacgagataaatttaatggag
gagttgacgctaaaaggtgttacgcagtactatgcatttgtacaagaacgacagaaagtc
cattgtctcaacacactattttcaaagttgcaaataaatcagagcattatattttgtaac
tcgacgcaacgtgttgaacttttagctaaaaaaataacagatttgggatactgttgctac
tacatacacgctaaaatggctcaagcacacagaaatcgtgttttccatgatttccgcgct
ggtctctgcagaaacttggtgagtagtgatttattcactcgtggtatcgacgtacaagca
gttaatgtcgtgataaactttgattttccaaaaatggccgagacgtatttgcatcgtatc
ggtagatctggtcgattcggtcatttaggtattgccatcaatctaataacttatgaagat
cgttttaatcttcatcgtattgagcaagaacttggtacggaaataaagccaattcccaag
gtgatagatcctagtttatacgtagctcgacctgaagataatactagtttggacgaaggt
aacgtgtcgaagtag
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