Cotesia glomerata: 123260673
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Entry
123260673 CDS
T07738
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
cglo
Cotesia glomerata
Pathway
cglo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123260673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cglo03021
]
123260673
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123260673
Transcription machinery [BR:
cglo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123260673
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123260673
U7-dependent histone pre-mRNA processing factors
123260673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
IbrB_C
Motif
Other DBs
NCBI-GeneID:
123260673
NCBI-ProteinID:
XP_044577853
LinkDB
All DBs
Position
LG3:complement(405600..410288)
Genome browser
AA seq
1112 aa
AA seq
DB search
MDPRLHRRAEPERNPRDTIVEWLNEATMGTNEVKVANLTKIQEYLINKSPQLMTTYLNEM
LLFCSDRSADVRKTVAGFIEEAGDKTPDRIPQMLTPLLRLISDEVAAVSKRAVRASSRIL
RAALKWIVSSSSAVVTPEMETAWNQLSSLKAHIIKMIDSDNDGIRTQAVKFLEGVVLLQT
HVDPDSPKRPDDFSLEDVPLTLKIARRRKLEEEANQVMDSLIKFHGSPHVSSVNLMACMG
SLAQIAKMRPQFMTKVIEALQRLQSDLPPTLSDSQVTSVQKQLKTTLLALMKHPASIEHV
QTIVKQLTQLGAKEQDIMKAYPKPEDIRRMKKRQAEAAAAASAAKRAKLETIIPTIPVED
PEPEVLPVIVKPELIELSESFIAERLSVEIATDLVLDSMTWVPDTMTAIFAREYQPSVSP
DLQEQRQAVAKLLAAQIKQAKAKKIKNKDDDAVMEDLIKNPTITVAEAKRERKREKDREK
EKEAKAVLEAEKSLAKRSRVKVLKLAEVTKPMSRDAKEKMLLMAVNRILRAEKSAIFGGV
ASARSKILTTLAATFKPHIREAVLRYISEDIRTRLDLALSWLYEEFALLQGFQRRTTLSS
TPHEAPKQAYNFVLCTLVSAIDIIQGKDRDLLLSRLYFEAPLITDDAIEALKTISGDETR
GLAPLNLLKEMVIRRPTKQLALLNVLLCHTGHEKALIREMSINLIVELYSRPELSKLIEE
YAVMYLGFLRLPNPPEIVFGSDRGRETVEQLWSESTTRACLSLYLALLEKHQDLIHELAR
VYTSMPPDVKRIVLRLVENPVCSLGMASPQLLALVENCPKGAETLITRIIHILTERSPPS
AELVSRVRELYQTRVSDVRFLIPVLNGLTKQEVIAALPKLIKLNNIVVKEVFNRLLGTLN
NDTGVSHTSPLTPAELLIALHNIDSSKAELMNVIKATTLCFAEKQVFTQETLAVVIQHLV
EINPLPTLLMRTVLQSLSSYPGLSGFVMNILQRLIMKQVWKFPKVWEGFVKCCQKLQPQS
FAVVLQLPPQQLADAFKMSSGLKERLVSHIEQFTENQKAHISSGIMDVIQGKQVVDLHDD
FDIAPPGDFSVDGKSDETPVADPSEPAPPGMD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaggctacaccgcagagctgaaccagagagaaatcctcgggatacgattgta
gaatggctgaatgaagcaacaatgggcaccaatgaagtcaaggtcgctaacttgactaaa
attcaagaatacttaataaacaaaagcccccagctgatgactacttacctgaatgaaatg
ttgctattttgttcagaccgtagtgctgatgtcaggaaaaccgtagctggttttatcgaa
gaagctggggacaagactccagacagaattccccagatgctaaccccgcttctgcggctg
ataagcgacgaggtagccgcagtatcaaaacgcgctgtccgtgcgagtagtagaattctc
cgcgcggcattaaagtggatcgtcagcagtagctctgccgtggtaaccccggaaatggag
accgcgtggaaccaattgagttccttgaaggctcacataataaaaatgatcgacagtgac
aacgacggaatccgtacgcaagcggttaaattcctcgaaggcgtagtcttgctccagaca
cacgtggaccccgactcaccaaagcgccccgacgatttttccctggaagacgttccgttg
accctgaaaatcgctcgtcgacgcaagcttgaagaggaggcgaaccaggtgatggattcg
ctgataaagttccacggctcgccccacgtaagtagtgttaatttgatggcatgcatggga
agtctcgcgcaaatagctaagatgcgtccgcaattcatgacaaaagttatcgaagcgctg
cagcgccttcagagcgatttgcccccgactttatccgactctcaggtgactagtgtccag
aagcagctcaagacaacattactcgctctgatgaagcaccctgcgagtatcgagcacgtg
cagaccatcgtcaagcagctgacgcagctgggcgccaaggagcaggacattatgaaggct
tatccgaagcctgaagacattcgcaggatgaaaaagcgccaagccgaggccgctgccgct
gccagcgccgccaagcgcgccaaattggaaacaattatacctaccatcccagtagaagac
cccgagccggaagttttgccggttattgtcaagccagagcttattgaactgtctgagagc
tttattgctgaaagattgagcgtagaaattgcaacagatttagttcttgatagcatgacc
tgggttccagacacaatgactgctatttttgcgagagaatatcaaccaagtgtgtcccca
gatttgcaagagcagcgacaagccgtggctaagcttttggctgctcagataaagcaagcc
aaggctaaaaaaatcaaaaataaggatgatgacgctgttatggaagatttaattaaaaac
ccgactatcactgtcgctgaagccaagcgcgagcgaaagcgcgagaaagaccgcgagaag
gaaaaagaagccaaggctgttcttgaagcggaaaagagtcttgctaagcgcagcagagtc
aaagttctgaaactcgctgaagttaccaagcccatgtcgagagacgctaaggaaaagatg
ttgctaatggcggttaatcggattctcagagctgaaaaaagcgcgattttcggaggagtt
gcttcagcgcggtctaaaattctaacaacccttgctgcaacctttaaacctcatatcaga
gaagcggtactgcgttacatctccgaggacatacgaacgaggctagatctggcattaagc
tggctctatgaagagttcgcactgctccagggcttccagagacggaccactttgagcagc
acgcctcacgaagctcccaaacaggcttacaattttgttttatgcactctggtctcggct
attgacatcatccagggcaaagatcgggacctgctgctgtccaggttgtactttgaagct
ccgcttattactgacgacgctatcgaagctctgaagaccatttccggtgatgaaactcgg
ggtttagctcctttgaatcttcttaaggagatggtgatccgccgacctaccaagcagctg
gccttgctgaacgttctgctctgtcatactggtcatgagaaagcgctaattcgcgaaatg
tcgattaatttaatcgttgagctctacagccgccctgaattgagtaagttgatagaagag
tacgctgttatgtacctcgggttcttgagacttccaaatccaccggaaatagtctttggt
tcggaccgtggcagggagacagttgagcaactgtggtcagaatctaccactagagcttgt
ttgagtctctatttagctttgctggagaagcaccaggacttgatccacgagctggcaaga
gtttacacttccatgccgccagatgtcaagagaatcgtgctgaggttggtggaaaatccg
gtttgttctttaggaatggccagtcctcaattgttagcgcttgtagaaaattgtccgaag
ggagcagagaccctgatcactagaatcatccacattttaaccgagaggtcgccacctagc
gctgaattggtatctagagtccgcgagctttatcagactcgcgtttcagatgttagattt
ttgattcctgttttaaacggactgaccaagcaggaagtaattgctgcgctgcctaagctt
atcaagctaaataatattgtggttaaggaagtgttcaaccggctcttgggaactcttaac
aatgacaccggagtttctcacacatctccgctgactcccgctgaattgttgatagccttg
cacaatatcgactccagcaaggcggaactgatgaacgtgataaaggcgactaccttgtgc
ttcgcggaaaaacaggtctttactcaagagactcttgcagttgtcatccagcacctggtc
gaaattaacccgctgcctaccttgctgatgagaactgttcttcagagcttgtcgtcttat
ccaggactcagcgggtttgtgatgaatattctgcagagattgattatgaagcaggtgtgg
aagttccctaaagtttgggaaggctttgttaaatgctgccagaagttgcagccacagagc
ttcgcggtggttcttcagctaccgcctcaacaactcgctgatgctttcaaaatgtcctcg
gggttgaaggaacgattggttagtcatattgagcagtttactgagaatcagaaggcgcat
atttcttcagggattatggatgttattcaagggaagcaggtggttgatttacatgatgac
tttgatattgctccgcctggggatttttctgtggatggtaaaagtgatgagactcctgtt
gctgatccttccgaacctgcgcctcctggaatggattga
DBGET
integrated database retrieval system