Cotesia glomerata: 123261079
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Entry
123261079 CDS
T07738
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cglo
Cotesia glomerata
Pathway
cglo03022
Basal transcription factors
cglo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123261079
09124 Replication and repair
03420 Nucleotide excision repair
123261079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cglo03021
]
123261079
03400 DNA repair and recombination proteins [BR:
cglo03400
]
123261079
Transcription machinery [BR:
cglo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123261079
DNA repair and recombination proteins [BR:
cglo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123261079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Acyl-thio_N
BBL5
PH_SLA1
Motif
Other DBs
NCBI-GeneID:
123261079
NCBI-ProteinID:
XP_044578497
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All DBs
Position
LG3:complement(27747638..27752460)
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AA seq
555 aa
AA seq
DB search
MTTSSEDVLMQVNEVRHKKGDGILYVMNERIAWMVHKKDTVSVSHKYADIKMQKISPDGK
SKIQLQVVLHDGSSSTFHFVNKNGPAAQIKDRDDVKELLQQLLPKFKKKVNKELEEKNRL
LQENPTLLQLYRDLVITQVITSEEFWSQHAVEYTQANKSQRQDIGVNSAFLADIKPQTDG
CNGLKYNLTKDIIESIFKTYPAVKRKHQENVPHKMSESDFWTKFFQSHYFHRDRINAGNK
DLFTECAKIDDQELKKDIQTGINDPLLDITSFEDKTTDENYDSGFSKGDKSSGNIVHQSM
IKRFNQHSIMVMKANTARQPAQAPPQVNGSAVAVKTSAPQSDEEPKTKKRRIQEKIAYDD
LDESTTEAALGTPLNLTHVDRYLHGPIAGSGSNQTTDDLQTTLSLLKREAANWVNGNTLS
RQPATSLISPAASVYALGELTPGGALMKGFREDNVGQLIPPELEKELRNVYVSLCELLKH
FWRSFPPTTPQLEEKVVRMHETLRKFHNSKLTPFEDRIQVEFSAVSQHLTSHLKLLLSTA
YNKFDHWHRRKIQMR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcctcggaagatgtgctgatgcaagtgaatgaggtccgtcacaaaaaaggc
gatggtattctttacgtaatgaatgaacgtatcgcatggatggtccacaaaaaagacact
gtgtctgtgagtcataaatacgctgatattaagatgcagaaaatatcaccggacgggaaa
tcaaaaatacaactgcaagttgttttacatgatggctcatcatctacatttcattttgtc
aataaaaatgggccagctgcacaaataaaagaccgtgatgatgtcaaagaactgttgcaa
cagttattaccaaaatttaaaaagaaagtcaataaagagctggaagaaaaaaatagatta
ttacaagagaatcctacattactgcaattataccgtgatttggtaataacacaagtaata
acgtctgaagaattttggagccaacatgcagtcgaatatactcaggcaaataaaagccaa
cgccaggatattggagttaatagtgccttccttgcagacataaaacctcaaactgacgga
tgcaatggtttgaaatacaacctgacaaaagacataatagagagtatattcaaaacttat
ccagcggtgaaacgaaagcaccaggagaacgtgcctcacaaaatgtcagagtcagatttt
tggacaaagtttttccaatctcactattttcatcgcgaccggataaacgcaggtaacaag
gatctgtttactgagtgcgctaaaatagacgaccaggagctgaaaaaagacatacagact
ggcataaacgacccgctgctggacataacgtctttcgaagacaaaacgactgacgagaac
tacgatagcggttttagcaaaggcgacaagtcctccgggaacattgttcaccagagcatg
atcaagagattcaatcagcacagtataatggtaatgaaagccaacactgccagacagcct
gctcaagccccgcctcaagttaatggctcagcggtggctgtaaaaacttccgctcctcag
tcagacgaagaaccaaaaaccaaaaaacgtagaatacaagaaaaaattgcgtacgacgat
ttagacgagtctacaacagaagccgccctaggaacgccgttaaatttaacccacgtagat
aggtatttgcacggaccgattgctggtagcggtagtaatcaaacgacagatgatcttcaa
actacgttaagtctattgaaacgtgaggctgccaactgggtcaatgggaacacattatct
agacagcctgctacgtcattaatcagtccagccgcttcggtgtatgccctcggggaatta
acgcccggtggggctttgatgaaaggttttcgcgaagataatgtcggccagttgatacca
ccggagttggagaaagaattacgcaatgtctatgtctcgctttgcgagctattgaaacat
ttttggcgcagtttccctcctactaccccacaattggaggaaaaagtcgtaaggatgcac
gagacgttacgaaagttccataattcaaagcttacaccttttgaggatcgtatacaagta
gagttttcagcagtaagtcaacatctaacaagtcatttaaagttattattatcaactgcg
tacaataaatttgatcattggcatcgaaggaaaatacagatgaggtag
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