Cotesia glomerata: 123261768
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Entry
123261768 CDS
T07738
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cglo
Cotesia glomerata
Pathway
cglo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123261768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123261768
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
123261768
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF4274
Vpu
Motif
Other DBs
NCBI-GeneID:
123261768
NCBI-ProteinID:
XP_044579484
LinkDB
All DBs
Position
LG3:25175381..25178500
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AA seq
912 aa
AA seq
DB search
MGENDDTNKLTNGEQSDVDSPNPPAMEKLIPEFESFDDFVKAGFSGVGNGIKAANSLPKG
ENFQYYSCFQAFKNFRIKQTKKISELMQSIVERAGAAGSMTDRDTEEKIKLLIDTNDILL
DRTSVLLDEEAGIKKNLDVELIVTSTKTNNCGSWNTSTVTQSPKAAGTKNAQAIRLLAAK
NVQRPQLSFKDKIDNSSKPWEPRIKDKPNSLKPLGIYLIDGINGQVFCHPYEFELDRFSP
AEKQLKKEKPIKYKSLEQTPLKIIETLEDLQIMIKDLEKYDEIAVDLEHHSYRSFLGITC
LMQISTRDTDYLVDTLSLRSELHLLNEIFTKPSVLKVFHGADLDIQWLQRDLSLYVVNMF
DTHQAAKHLNLPYLSLAYLLKTHCKVDPNKHFQLADWRIRPLPEELTKYAREDTHYLLYI
KDILRNALIDAANGQTNILKAVYDRGVDICKKIYEKPICDETSCMNMYRKSQKMFNNKQL
YALKELFAWRDETARQEDDSTGYVLPNHMLLNIAETLPREMQGILACCNPIPPLVRQNLL
KLHKLILKAREQPLINPVLQQELRPRLNLNNQPADSDIWMWSPHDNITGVDVQANLPCLI
NDEEEESSSMDTSDDKKNFKNLEKSGKAKHQVTVFDSPVNSDDEDSAARKKLLKAKKLFA
SPFQRYKLVIPMIAAIEELERKRKEEEEKRTEETKTRLDEREAADNAERVERIHEHFMNV
VSQNDKSKKKIDDNLQVPLTAIPGTKKRKRDIEDDDDDDNDDDKNNVRQSKLDFTNPAPA
KASTVVVNSFKKRQRNDEDDDDNCQPKKKKMTKKQRKAFNKANNNSVSPIKPLNAYANSD
LKRKAQKALNRKELEEKGMLPKQDFNYKEVDFSSFQGGSKTSSAKNAPFMQQQNKEKRKK
GKGKKKKEKLGI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaatgatgatacaaataaattaactaatggtgaacaaagtgatgttgattca
ccgaatccaccagccatggaaaaattaattcctgagtttgaaagttttgacgactttgtt
aaggctggatttagcggcgttggaaatggaatcaaggcggcaaacagcttgccgaaaggc
gagaattttcagtactactcatgctttcaagcttttaaaaattttcgaattaagcaaact
aaaaaaataagtgaattaatgcaatctatcgtagagagagctggagccgctggcagtatg
acagatcgtgacactgaagaaaaaattaagcttttaatagacaccaacgacattcttctg
gatcgaacaagtgttctgctggacgaggaggcgggaataaaaaagaacctcgacgtagaa
ttgattgtgacatctaccaagacaaataactgcggctcgtggaatacatcaacagtaacc
caaagccccaaggctgctggcacaaaaaacgcacaagcaataagacttctagcagccaaa
aatgtccagcgaccccagttgtctttcaaagataaaattgacaacagttcaaagccctgg
gagcctcgaattaaggacaaaccaaacagcttgaagcctctgggaatttatttgattgat
ggaatcaacggtcaagtcttttgtcatccttatgaatttgaactggaccgattttcaccg
gcagaaaagcaattaaagaaagaaaaacctatcaagtataaatctcttgaacaaactcct
ttgaaaataatagaaacactagaagatttacaaataatgattaaagatttggagaaatat
gacgaaatagctgtagatttagaacatcattcataccgttcattcttggggataacgtgt
ctcatgcaaatatcaacccgagacactgattatttagtagacactctgtcgttgaggtca
gaattacatttacttaatgaaatattcaccaagccgtcagtattaaaagtatttcatgga
gcagatctggatatccaatggcttcaacgcgatctttcgctttacgtcgttaatatgttc
gatactcatcaagcagctaagcacttgaatttgccttaccttagcttggcttatttatta
aaaacccactgcaaagtcgaccccaacaaacactttcaactggcagactggcgtatccgt
cctttacccgaagagctgacgaagtacgcgcgagaagacacgcattacttactctatatc
aaagatatccttcgaaatgctttgatcgacgcagcgaatggacagacgaatattctgaag
gctgtttatgaccgtggagttgatatttgcaagaaaatttacgagaagccgatatgtgac
gaaaccagctgtatgaacatgtaccgtaagagccagaagatgttcaataataagcagttg
tacgcgttgaaggaactgtttgcttggcgagatgaaactgctagacaagaagacgatagt
actggttacgttttgccgaatcatatgttgctgaatattgctgagaccttgccccgtgaa
atgcaaggtattctggcgtgttgtaatcctattcctccgctagttaggcagaatttgttg
aagctgcataaattaattcttaaggcgagagaacagccactgataaatccggtgttgcag
caggaattgaggccgaggttaaatttaaataatcaacctgcagattctgatatctggatg
tggtcgccgcatgataatataactggagttgatgttcaagctaatttaccttgtctgatc
aatgatgaagaagaagaaagttctagtatggacaccagcgatgataagaaaaattttaaa
aatttagagaaaagtgggaaagcaaaacatcaagtgacagtgtttgacagcccagttaat
tccgatgatgaagactccgctgccaggaaaaaacttttgaaagctaagaaattatttgcc
agtccgttccagaggtacaagcttgtgattccgatgattgcagcaatagaagaactggag
cgtaagaggaaagaagaagaggagaaacggactgaggaaactaagacgagactggatgaa
agagaagctgcagataatgctgagcgtgtcgaacgcattcatgaacactttatgaatgtt
gtgagtcagaatgataaaagtaagaagaaaattgatgataatcttcaagtcccgctgact
gcgatacccgggactaaaaaaagaaaacgagatattgaggatgatgatgatgatgataat
gatgatgataagaataatgtcagacaaagtaaacttgatttcacaaatccagcacctgct
aaagcgagtactgttgttgttaattctttcaagaaacgacaaaggaacgatgaggatgat
gatgataattgtcagccgaaaaaaaagaagatgactaagaagcagagaaaagcttttaat
aaggctaataataattcagtcagtcctattaaaccattaaatgcttacgcaaattcagac
ttgaagcgaaaagcgcaaaaggctttaaatagaaaagagttagaagaaaagggtatgctg
cctaaacaagatttcaattacaaagaagttgatttctccagttttcagggaggtagtaaa
acttcttctgctaaaaacgcgccttttatgcagcagcagaacaaagaaaagagaaaaaaa
ggcaagggcaaaaagaagaaagaaaaattaggaatatga
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