KEGG   Cotesia glomerata: 123261768
Entry
123261768         CDS       T07738                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cglo  Cotesia glomerata
Pathway
cglo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cglo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123261768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cglo03019]
    123261768
Messenger RNA biogenesis [BR:cglo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     123261768
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC DUF4274 Vpu
Other DBs
NCBI-GeneID: 123261768
NCBI-ProteinID: XP_044579484
LinkDB
Position
LG3:25175381..25178500
AA seq 912 aa
MGENDDTNKLTNGEQSDVDSPNPPAMEKLIPEFESFDDFVKAGFSGVGNGIKAANSLPKG
ENFQYYSCFQAFKNFRIKQTKKISELMQSIVERAGAAGSMTDRDTEEKIKLLIDTNDILL
DRTSVLLDEEAGIKKNLDVELIVTSTKTNNCGSWNTSTVTQSPKAAGTKNAQAIRLLAAK
NVQRPQLSFKDKIDNSSKPWEPRIKDKPNSLKPLGIYLIDGINGQVFCHPYEFELDRFSP
AEKQLKKEKPIKYKSLEQTPLKIIETLEDLQIMIKDLEKYDEIAVDLEHHSYRSFLGITC
LMQISTRDTDYLVDTLSLRSELHLLNEIFTKPSVLKVFHGADLDIQWLQRDLSLYVVNMF
DTHQAAKHLNLPYLSLAYLLKTHCKVDPNKHFQLADWRIRPLPEELTKYAREDTHYLLYI
KDILRNALIDAANGQTNILKAVYDRGVDICKKIYEKPICDETSCMNMYRKSQKMFNNKQL
YALKELFAWRDETARQEDDSTGYVLPNHMLLNIAETLPREMQGILACCNPIPPLVRQNLL
KLHKLILKAREQPLINPVLQQELRPRLNLNNQPADSDIWMWSPHDNITGVDVQANLPCLI
NDEEEESSSMDTSDDKKNFKNLEKSGKAKHQVTVFDSPVNSDDEDSAARKKLLKAKKLFA
SPFQRYKLVIPMIAAIEELERKRKEEEEKRTEETKTRLDEREAADNAERVERIHEHFMNV
VSQNDKSKKKIDDNLQVPLTAIPGTKKRKRDIEDDDDDDNDDDKNNVRQSKLDFTNPAPA
KASTVVVNSFKKRQRNDEDDDDNCQPKKKKMTKKQRKAFNKANNNSVSPIKPLNAYANSD
LKRKAQKALNRKELEEKGMLPKQDFNYKEVDFSSFQGGSKTSSAKNAPFMQQQNKEKRKK
GKGKKKKEKLGI
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgggtgaaaatgatgatacaaataaattaactaatggtgaacaaagtgatgttgattca
ccgaatccaccagccatggaaaaattaattcctgagtttgaaagttttgacgactttgtt
aaggctggatttagcggcgttggaaatggaatcaaggcggcaaacagcttgccgaaaggc
gagaattttcagtactactcatgctttcaagcttttaaaaattttcgaattaagcaaact
aaaaaaataagtgaattaatgcaatctatcgtagagagagctggagccgctggcagtatg
acagatcgtgacactgaagaaaaaattaagcttttaatagacaccaacgacattcttctg
gatcgaacaagtgttctgctggacgaggaggcgggaataaaaaagaacctcgacgtagaa
ttgattgtgacatctaccaagacaaataactgcggctcgtggaatacatcaacagtaacc
caaagccccaaggctgctggcacaaaaaacgcacaagcaataagacttctagcagccaaa
aatgtccagcgaccccagttgtctttcaaagataaaattgacaacagttcaaagccctgg
gagcctcgaattaaggacaaaccaaacagcttgaagcctctgggaatttatttgattgat
ggaatcaacggtcaagtcttttgtcatccttatgaatttgaactggaccgattttcaccg
gcagaaaagcaattaaagaaagaaaaacctatcaagtataaatctcttgaacaaactcct
ttgaaaataatagaaacactagaagatttacaaataatgattaaagatttggagaaatat
gacgaaatagctgtagatttagaacatcattcataccgttcattcttggggataacgtgt
ctcatgcaaatatcaacccgagacactgattatttagtagacactctgtcgttgaggtca
gaattacatttacttaatgaaatattcaccaagccgtcagtattaaaagtatttcatgga
gcagatctggatatccaatggcttcaacgcgatctttcgctttacgtcgttaatatgttc
gatactcatcaagcagctaagcacttgaatttgccttaccttagcttggcttatttatta
aaaacccactgcaaagtcgaccccaacaaacactttcaactggcagactggcgtatccgt
cctttacccgaagagctgacgaagtacgcgcgagaagacacgcattacttactctatatc
aaagatatccttcgaaatgctttgatcgacgcagcgaatggacagacgaatattctgaag
gctgtttatgaccgtggagttgatatttgcaagaaaatttacgagaagccgatatgtgac
gaaaccagctgtatgaacatgtaccgtaagagccagaagatgttcaataataagcagttg
tacgcgttgaaggaactgtttgcttggcgagatgaaactgctagacaagaagacgatagt
actggttacgttttgccgaatcatatgttgctgaatattgctgagaccttgccccgtgaa
atgcaaggtattctggcgtgttgtaatcctattcctccgctagttaggcagaatttgttg
aagctgcataaattaattcttaaggcgagagaacagccactgataaatccggtgttgcag
caggaattgaggccgaggttaaatttaaataatcaacctgcagattctgatatctggatg
tggtcgccgcatgataatataactggagttgatgttcaagctaatttaccttgtctgatc
aatgatgaagaagaagaaagttctagtatggacaccagcgatgataagaaaaattttaaa
aatttagagaaaagtgggaaagcaaaacatcaagtgacagtgtttgacagcccagttaat
tccgatgatgaagactccgctgccaggaaaaaacttttgaaagctaagaaattatttgcc
agtccgttccagaggtacaagcttgtgattccgatgattgcagcaatagaagaactggag
cgtaagaggaaagaagaagaggagaaacggactgaggaaactaagacgagactggatgaa
agagaagctgcagataatgctgagcgtgtcgaacgcattcatgaacactttatgaatgtt
gtgagtcagaatgataaaagtaagaagaaaattgatgataatcttcaagtcccgctgact
gcgatacccgggactaaaaaaagaaaacgagatattgaggatgatgatgatgatgataat
gatgatgataagaataatgtcagacaaagtaaacttgatttcacaaatccagcacctgct
aaagcgagtactgttgttgttaattctttcaagaaacgacaaaggaacgatgaggatgat
gatgataattgtcagccgaaaaaaaagaagatgactaagaagcagagaaaagcttttaat
aaggctaataataattcagtcagtcctattaaaccattaaatgcttacgcaaattcagac
ttgaagcgaaaagcgcaaaaggctttaaatagaaaagagttagaagaaaagggtatgctg
cctaaacaagatttcaattacaaagaagttgatttctccagttttcagggaggtagtaaa
acttcttctgctaaaaacgcgccttttatgcagcagcagaacaaagaaaagagaaaaaaa
ggcaagggcaaaaagaagaaagaaaaattaggaatatga

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