Cotesia glomerata: 123262444
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Entry
123262444 CDS
T07738
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cglo
Cotesia glomerata
Pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123262444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cglo03041
]
123262444
Spliceosome [BR:
cglo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123262444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
PRP4
NBCH_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Ge1_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
WD40_like
Beta-prop_NWD2_C
WDR54
Nbas_N
Motif
Other DBs
NCBI-GeneID:
123262444
NCBI-ProteinID:
XP_044580589
LinkDB
All DBs
Position
LG4:28026015..28029428
Genome browser
AA seq
526 aa
AA seq
DB search
MTMSDDEDLVYVRKSKTVHYGSLEDSERARLAAEASEDTKDPPEPGSTVPSSASALQGNV
HVSNEYLELEDEMSKDKQALLEEFERRKKARQINVSTDDSEVRRTLRVLGEPICLFGEGP
ADRRARLRELLASRGEDVIKKKHDDDDKPVRPLEREMETTWYHEGPESLQIARAWIAEYS
LRRAGARLQRAREDLALPGATRTAHQQELLRKLQSLSTYCSQVGDTRPISSCQFSPDSKI
LATSSWSGTCKLWSVPDCGLLRTLNGHTRLAGCIVFHPKATISEEVVGPTAGSTCVLASC
DADGKVNLWAGGSGDKPLADLEGHDKRVSRIAFHPSGRFLGTCCHDASWRLWDLEQQEEV
LHQEGHAKAVHCISFQVDGSVAATGGHDAFGRVWDLRTGRCIMFMDGHSKSIFGIDFSPN
GFQIVTASDDNTCKIWDLRKRTCLYSIPAHTNLLSDVKFQKGDGHYLVTASYDNTAKIWS
NKTWQPLKTLQGHDGKVMAVDVSADQKYIATSSYDRTFKLWAPENL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtccgacgacgaagatctggtgtacgtccgaaaatccaagacagtccactat
ggatccctggaagacagcgagcgcgcgcgcctggcagcagaagcatcagaggacacaaaa
gaccccccagagcccggttcaacagtcccatcatcagcgtcagctctccaaggaaacgtc
cacgtgtcgaacgagtacctagaactagaagatgaaatgtcaaaggacaagcaagccttg
ctcgaagaattcgagcgtcgcaaaaaagcaagacagataaacgtatcaacagacgattcc
gaggtacgtagaacccttcgagtcctaggtgagccgatctgtctcttcggcgagggtcca
gcggaccgtcgtgctcgactacgagagttgctagccagccgcggggaagatgtcataaaa
aagaagcacgacgacgatgataaacccgtccgacccctagaacgcgagatggagaccacc
tggtaccatgaaggtccagagtctttgcagatagctcgcgcttggatcgctgagtactct
ttaagacgagcgggagcgagattgcagcgtgcgagggaagatttagcgcttccaggtgcc
accagaaccgcgcaccaacaggaactcctcaggaagctccagagtttgtcgacctactgc
tcccaggtcggagacacgcgtcccatatcttcctgccagttcagtccggactctaaaatt
cttgccacgtcttcctggtctggaacctgcaagctctggtcagttcctgactgcggactc
ctgaggacgctcaatggacacaccaggttggctgggtgcatagttttccaccctaaagct
accatctccgaggaagtcgtcggcccgactgctggttcgacctgcgtcctggccagttgc
gacgccgacggcaaggtcaacctctgggcaggtggctcgggggacaagcctctagccgac
ctggagggtcacgacaaacgcgtctccaggatcgcgtttcatccctccggaaggttcctg
ggcacttgctgccacgacgcttcctggaggctctgggacctggagcagcaggaggaagtt
cttcaccaggaaggccacgcaaaagctgtccactgcatcagctttcaggttgacgggagt
gttgctgctactgggggccacgacgcttttgggcgtgtctgggatttgaggaccggaagg
tgtatcatgttcatggacggacactccaagagtatcttcgggattgatttttctccaaac
gggtttcaaattgtcactgccagtgatgataacacttgcaaaatttgggacttgaggaaa
cggacttgcttgtactcgattccggctcacactaatctcctttcggatgttaagtttcag
aaaggcgatggacattatttagtgactgcttcttatgacaacactgccaagatctggtcg
aataaaacttggcagccgctgaagactcttcaagggcatgatggtaaagttatggcggtt
gatgtctccgcggatcagaagtatattgctactagctcttatgatcgaacgtttaaactc
tgggctcctgagaatttgtaa
DBGET
integrated database retrieval system
