Cotesia glomerata: 123264450
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Entry
123264450 CDS
T07738
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123264450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cglo03041
]
123264450
03009 Ribosome biogenesis [BR:
cglo03009
]
123264450
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123264450
Spliceosome [BR:
cglo03041
]
Complex A
U2 snRNP components
U2 related factors
123264450
Complex B
123264450
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123264450
Ribosome biogenesis [BR:
cglo03009
]
Eukaryotic type
90S particles
Helicases
123264450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
SRP54
AAA_19
nSTAND3
ABC_tran
ResIII
AAA_30
T2SSE
AAA_25
ATPase
Motif
Other DBs
NCBI-GeneID:
123264450
NCBI-ProteinID:
XP_044583690
LinkDB
All DBs
Position
LG4:11826712..11832926
Genome browser
AA seq
736 aa
AA seq
DB search
MSKRRIEVLDPFIKKKREEAKLDMAGSSASSSTGGTAVGASTGANKSLCPPSGPGQINPY
TKLPFTPRYYEFYKKRITLPVFEYRADFMRLLSEYQCIVLVGETGSGKTTQIPQWCVEYS
TQTGTKGVACTQPRRVAAMSVAQRVSEEMDVTLGEQVGYSIRFEDCSSPYTVLKYMTDGM
LLREGMSDPMLEAYQVILLDEAHERTLATDLLMGVLKEVTKQRSDLKLVIMSATLDAGKF
QQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEVPGDLLLFLTGQE
EIEEACKRIKREMDNLGPDVGELKCIPLYSTLPPNLQQRIFEPAPPNKPNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTERAYKNEMQENTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAIMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCF
VRPNEAKKAADDAKMKFAHIDGDHLTLLNVYHAFKQSMEDPQWCYDHFVNYRSLKSGDNV
RQQLSRIMDRFSLKRTSTDFTSKDYYINIRKALVDGFFMQVAHLERTGHYLTIKDNQMVQ
LHPSSCLDHKPEWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYDLQNFPQCEAKRQL
EVIQARLESKQYQEGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacggattgaagttttggacccttttatcaagaaaaagcgagaggaagct
aaactagacatggcaggttcatcagcgtcatcttcaaccggtggaacagcagtaggcgcg
tcaactggagcgaacaaatcattgtgcccaccttcagggccaggacagattaatccttac
acaaagttacctttcacaccgcggtactatgaattttataagaaacggatcacattgccg
gtattcgagtacagagctgactttatgcgtctgttgagtgagtaccagtgcatcgtcctg
gtcggtgagaccgggtctggtaaaaccactcagataccccagtggtgcgttgagtattct
actcagactgggacaaagggtgttgcttgtactcagcctcgtcgagtagcagcaatgagc
gtggcccagcgagtctcagaagagatggacgtaacattgggagagcaagtggggtacagc
atccgtttcgaggactgcagctcgccttacacagtcctgaaatacatgacagatggtatg
cttctgcgagaaggaatgtcggacccgatgctggaggcttaccaagtgatcctgctggat
gaagcccacgagcggacactggcgaccgacttgctgatgggagtcctgaaagaagtgacc
aagcagcggtctgacttgaagcttgtgatcatgagtgccaccctggacgctggaaaattc
cagcagtacttcgacaacgctccgctgatgaatgttccgggtcgtacccacccggtcgaa
atattctacaccccggaacccgagcgggactaccttgaggccgcaatccgtactgtcatc
cagatccacatgtgcgaggaagtccccggggacttgttgctcttcttgacaggtcaggaa
gaaattgaggaagcctgcaagcggataaaacgcgagatggacaaccttggtccggatgtc
ggggaactcaagtgcatcccgctgtactcaactctgcctccaaacttgcagcagaggatc
ttcgaaccggctcctccgaacaaacccaacggcgccattggacgcaaggtcgttgtctcg
actaatattgccgagacttctttgactattgatggtgtggtgtttgtcattgatcctggg
ttcgctaagcagaaagtttacaatccaaggattagggttgagtcccttcttgtgtctcct
atcagcaaagcttcggctcaacaaagagctggacgagctggaagaactagacccggtaaa
tgcttcagattatacacagaaagagcgtacaaaaatgagatgcaagagaatacttatcca
gaaatcttaagatctaatttgggaagcgttgtgctgcagttgaaaaaattgggaatagat
gatttggtccactttgattttatggaccctccagcacctgaaactcttatgcgagctttg
gagttgttgaattatttggcggccttggatgatgacggaaatttgacggacttgggggct
attatggcggaatttcctttggaccctcaacttgctaagatgttaattgcttcttgcaat
cataattgtagcaatgaaattctcagtatcactgctatgttgtcagtcccacagtgtttt
gtaagaccaaatgaagctaaaaaggctgctgatgatgcaaagatgaaattcgctcatatt
gatggggaccatttgacattattaaatgtgtatcatgcttttaaacaaagtatggaagat
ccacagtggtgttatgatcactttgtgaattaccgatcactaaaaagcggagacaatgtt
cgacaacagttgagtagaattatggaccgattttcgttgaagagaacatctactgatttt
acatctaaagattattacattaatattagaaaagcacttgttgatggattcttcatgcag
gttgcacatttagaaagaacaggacattatttaacaattaaagacaatcaaatggtacaa
ttacatcctagtagttgtttggatcataaaccagaatgggttatttataatgaatttgtt
ttaacgactaaaaattatataagaactgttacagatattaaacctgaatggttattaaaa
atagcaccgcagtactacgacctccaaaatttccctcaatgtgaagcaaaacgacaatta
gaagtaatacaagcaagattagaatctaaacagtaccaagaaggtttctaa
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