Cotesia glomerata: 123265659
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Entry
123265659 CDS
T07738
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cglo
Cotesia glomerata
Pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123265659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cglo03041
]
123265659
Spliceosome [BR:
cglo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123265659
Complex C
U5 SnRNP specific factors
123265659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123265659
NCBI-ProteinID:
XP_044585421
LinkDB
All DBs
Position
LG5:complement(22183877..22197465)
Genome browser
AA seq
2374 aa
AA seq
DB search
MSIPPYLLGPNPWATMLAQQQAHAQLAAAQAHAQAAAQAAHHVHVQAMAAGPPLPQMPKQ
PEVLSEEKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRKY
RHDKRVYLGSLKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYI
AQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQIDLDSEDDK
PVADWFYEHKPLVGTKFINGPTYRKWNLSLPQMATLYRLANSLLTDLVDQNFFYLFDPKS
FFTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNN
MPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTVEPQIEDDEDFVLDE
EIQPFLQETPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPVK
VRVSYQKLLKYFVLNALKHRHPKPQKRRYLFKSFKATKFFQTTTIDWVEAGLQVCRQGYN
MLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHV
QYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVG
KGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFD
LELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRY
VKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYIS
PEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQRE
ELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYL
DQYLWYEADKRKLFPPWVKPSDSEPPPLLVYKWCQGINNLQDVWDVNEGECNVLLESKFE
KLYEKIDLTLLNRVLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIAQ
YYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASEAAHPIRLYCRYVDRIHLFLRFS
ADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLP
RSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTIHEEYTTARDGVWNLQNEIT
KERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEASAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSR
PSLLADSKDSMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGL
LIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILR
ALHVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSN
YETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLR
AQIAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPTSLPNHQYLKEMEPLGWIHTQ
PNELPQLSPQDISTHARIMADNPVWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQN
TDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVKHSPNMKYELQLANP
KEFYHEIHRPGHFLNFSSLEDGDGVGADREDHYA
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataccgccgtatctgctggggcccaacccatgggcgacgatgctggcccagcag
caagctcatgcccaattagcagcagcacaagcacacgctcaagcagcggcccaagcagcc
catcatgtacatgtgcaggcgatggccgcgggccctccgcttcctcagatgccaaaacag
ccagaagtgttatccgaagaaaaattacaggaaaaagcgcaaaaatggcaacaattgcaa
tcaaaacgtttcgcggaaaaaagaaagtttggttttgtggatgcgcaaaaagaagacatg
cctccggagcacatcaggaaaatcatccgcgaccatggagatatgagtagcagaaagtat
cggcatgacaagcgtgtatatttgggctcacttaaatacatgcctcatgcggtgatgaag
cttttggagaacatgccgatgccctgggagcagattagagacgttaaagttctctatcac
attaccggagcgattacatttgtcaacgaaattccttgggtgatcgagccggtttatatt
gcacagtggggtaccatgtggatcatgatgagacgagagaaacgtgaccgacgacacttc
aagagaatgaggtttccgccttttgacgatgaagaacctccgcttgattacgctgataat
attttggatgtcgagcctttggaagctattcaaattgaccttgattctgaagacgacaag
cctgttgcggattggttctacgaacacaagcctcttgttggtactaaatttatcaacgga
ccaacctacagaaaatggaacctgtctctccctcaaatggcaactttataccgactcgcc
aactccttgctgacggatctcgtggatcagaacttcttttatctttttgatccaaaatcc
ttcttcacagcgaaggcattaaatatggcaattcccggaggtcctaaattcgagccgctt
gtaaaggactctaatgctgcggatgaggattggaatgaatttaacgacatcaataaaatt
atcatccgtcagccgattcgtactgaataccgaattgcatttccttacctctataacaac
atgccacactttgttcatctttcctggtaccacgctcccaacgtcgtgtatataaaaaca
gaggatccagatttgccggctttctacttcgaccctctgataaaccctatttctcacaga
aactctctgaagacagtagagcctcaaattgaagacgatgaagactttgtattggacgaa
gaaatacaaccatttttacaagaaactcccctgtacacagacaacacagccaatggaatc
gcacttctctgggctccacggcctttcaatacaagatctgggcgcacgaggagagccatt
gacattccacttgtcaaatcttggtaccgcgaacattgtcctcccggtcaacctgtaaaa
gttcgtgtcagttatcaaaaattacttaaatacttcgttttaaatgcgttgaagcacaga
catcctaagccacagaaaaggcgatacctctttaaatccttcaaagcaaccaagttcttc
caaacgacgaccattgattgggtcgaggcaggtctacaagtctgtcgtcaaggctacaac
atgctgaatcttctgattcatcgtaaaaatttgaattacctccatcttgactacaacttc
aatttgaaacccgtcaaaactttgactaccaaagaaagaaaaaagtcgcgtttcggtaac
gcttttcatttatgccgtgaaatcttacgattaacaaaattaattatcgattctcatgtc
cagtatcgacttaacaacgttgatgctttccaacttgccgatgggctgcagtatattttc
gctcatgtaggtcaacttacaggaatgtaccgatacaagtacaaacttatgagacaaatt
cgaatgtgtaaggacttgaaacacttaatttactatcgttttaacaccggaccagttggt
aaaggtccaggatgtggattctgggccccaggatggcgagtttggctcttctttatgcgt
ggaattacgccattattggagcgatggttgggtaatttactatcccgacaattcgaaggt
cgacactcgaaaggtgtcgcgaagacagtgaccaagcagcgagtcgagtctcacttcgat
cttgagctccgtgcatcagtgatgcatgacatcgtcgacatgatgcctgaaggaataaag
cagaataaagctaggacaattctccagcacttgagtgaagcctggcggtgttggaaggcc
aacatcccgtggaaggtaccaggtcttccgatcccgatagaaaatatgatcttgaggtac
gtcaagatgaaggccgattggtggacaaatacagctcattacaatcgtgagcgaattcgt
cgtggagccactgtcgacaagactgtctgcaagaaaaatcttggaagattaaccagattg
tatttgaaagcagagcaagaacgtcagcacaattacttgaaagatggcccgtatatttct
ccagaagaagctgttgctatttacacgactactgtccattggttggaatcaagaagattt
gctccaattccattcccacctctttcgtacaaacatgacactaaacttttgattcttgcc
ctcgagcgtctcaaagaggcttacagtgtaaaatccagattgaaccagagtcaaagagaa
gaacttggactgattgaacaggcgtatgataatcctcatgaagctttatcccgtataaaa
cgtcacttgctcactcagagagcctttaaagaagtcgggattgagtttatggatctctac
agtcatttgattccagtttatgacgtcgagcctttggaaaaaataaccgatgcttacttg
gatcaatacttgtggtacgaagctgataaacgtaaacttttcccaccgtgggttaagccc
tcagactctgaacctccaccactgcttgtttacaaatggtgtcaggggattaataatctt
caagatgtttgggacgtaaacgaaggtgaatgcaacgttttattggagtccaagtttgaa
aagttgtatgaaaaaattgatcttacacttttgaacagagttttaagattgattgtcgat
cataacattgctgattacatgaccgctaaaaacaacgttgttattaattacaaagacatg
aaccacacgaacagttacgggattatccgagggttgcaatttgcatcttttatcgcccag
tactacggtcttgttttggatttattggtactaggtttacaaagagccagcgaaatggct
ggtcctccacaaatgcccaatgactttttgactttccaagatgttgcttctgaagcagcc
cacccgattcgtctttattgtcggtacgtcgacaggattcatctatttctcagattttct
gccgacgaagcaagagacttgatccagcggtatctaactgagcatccggatccaaacaac
gaaaatatcgtcggttataacaacaaaaaatgctggccgagagacgcgaggatgcgtcta
atgaagcatgatgttaatttaggtcgcgctgttttttgggacatcaaaaatcgtctcccg
aggtcgactaccaccatccaatgggaaaatagctttgtaagcgtttactcgaaggataac
ccgaatttgctcttcaatatgagcggatttgaatgccgaatcttgccgaaatgtcggaca
attcacgaagagtacaccaccgctcgtgatggagtctggaatctgcaaaatgaaattacc
aaggaaagaaccgctcaatgtttcttacgagttgatgatgagagtctccagcgattccac
aatcgtgtaagacagattcttatggcctcaggatctacaacctttactaaaattgtcaac
aaatggaacactgcgcttatcggattaatgacctacttcagagaagctgtagtaaatacc
caagagttgcttgatttattagtaaagtgtgaaaacaaaattcagacgcgtattaagatt
ggattgaactctaaaatgccttcaagattcccgcccgttgttttctacacacctaaagaa
ttaggaggtcttggaatgttgtcgatgggccacgtattaattccacagtcagatcttcgc
tggtcgaaacaaacagatgtcggaatcactcacttccgatcaggaatgagccacgacgaa
gatcaattgattcccaatctgtatcgatacatccaaccgtgggagtctgaattcattgat
tctcaacgagtgtgggcagagtatgctctgaaacgtcaagaagctagtgcccaaaaccgc
agactgaccctagaagatcttgaagacagttgggatcgtggtatcccgagaatcaacact
ctgtttcaaaaagaccgtcacactctagcttacgacaaaggttggagaattagaactgaa
tttaaacagtaccaggtattgaagcagaaccccttctggtggactcatcaacgtcatgac
ggaaagttgtggaatttgaataactaccgtacagacatgattcaagcgctgggaggagtc
gagggaattcttgagcacacgcttttcaaaggaacttacttcccaacgtgggagggtctt
ttctgggaaaaagcttcaggtttcgaagaatcgatgaagtacaaaaagctgacaaacgcc
caaaggtcgggtcttaatcagataccaaatcgtcgattcacgctctggtggtcgccgacg
ataaatcgtgctaatgtttacgtcggtttccaagtacagcttgatttaacgggtattttc
atgcacggtaaaataccgacgcttaaaatatccttgattcagatattccgagctcacttg
tggcaaaaagttcacgagtcaatagtgatggatctctgtcaggtattcgatcaagaattg
gacgccttggaaatcgagacggtacaaaaagagacaattcacccgagaaagtcatacaaa
atgaactcatcctgcgcggatatattattattttccgcttacaaatggaacgtgtcacgg
ccttccttgctcgcggactccaaggattcaatggataacactacgacacaaaaatactgg
atcgatgtacagttaaggtggggagactatgactctcacgatatcgaacggtacgctcgt
gctaaattcctcgactacaccacggacaacatgtctatttatccatcaccgaccgggttg
cttatcgctattgatttggcgtataatctccacagtgcgtatggtaattggttccctgga
tgcaaaccactcatccagcaggccatggccaagataatgaaggccaatcccgcactttat
gttttgcgagagcgtatacgtaaagctttacagttgtactcttcagagcctaccgagcca
tatttgtcctcgcaaaattacggagagttgttcagtaaccagattatctggttcgttgac
gacacaaatgtataccgagttactattcacaaaacattcgagggtaatttaacgacaaag
ccgatcaacggagctatttttatattcaaccctcgaacaggtcaattattcttgaagata
atccacacttcagtctgggctggacagaaacgtcttggacagttggcgaaatggaaaacc
gctgaggaagttgctgctttgatccgatcgttgccagttgaagaacagcctaagcaaatt
attgtaacgcgaaagggaatgttggatccacttgaagtgcatcttttagattttccaaac
attgtaatcaagggttcggaattacagctgccgttccaggcttgtttgaaggttgagaag
ttcggtgatcttattttgaaggcaactgaacctcagatggtgctctttaatctgtatgat
gactggctcaagacaatttcttcttacactgccttttctcggctcattcttattttgcgt
gctctgcatgttaacacagaaagaacaaaagttgtcctcaagccggacaaaacaactatc
acagagcctcatcatatctggccatcgcttaccgatgatgaatggatcaaggttgaagta
cagcttaaagatcttattcttgcggattacggtaagaagaacaatgtgaatgtcgcttca
ctgacccagtctgaaatacgtgacattattttgggtatggaaataagcgcaccgtcggct
caacgtcaacaaattgctgaaattgaaaagcagactaaggaacagtcacaattgactgcc
accaccacgagaactgttaacaaacatggtgatgaaattataacagccacaacgtctaat
tacgaaactcagacattcagttcgaagactgagtggcgagtaagagctatttcggcaact
aatttgcacttgagaacaaatcacatctatgtttcttccgatgacatcaaagaaactggt
tacacctatatcttaccgaaaaacgttctcaaaaaatttgtcaccatttcggatctacgg
gcgcagattgctgggtacttgtacggtatcagtccgccagataatcctcaggttaaagaa
attcggtgtattgtgatggctccgcagtggggaactcatcaaacggtccatctacctacc
tcacttccaaaccatcagtatctcaaggaaatggaaccgcttgggtggatccatactcag
ccgaatgaacttccgcagctctctcctcaagacatatcaacacacgctagaataatggct
gataatccagtttgggatggagagaagactatcgttatcacttgtagcttcacacctggt
tcttgttcgctgacggcttacaagcttacacccagcggattcgagtgggggaaacagaac
actgataaaggaaataatccgaaaggatatttgccaagccattatgaaaaagtacagatg
ctactttccgatagatttcttggattctttatggttcctagtcaagggtcttggaactac
aattttatgggcgttaaacattctccgaatatgaagtacgaattacagctagcaaatccg
aaagaattctatcacgaaatccacagacccggacacttcctcaacttctcaagcttggag
gatggagacggcgtcggagctgatcgtgaggatcattatgcttaa
DBGET
integrated database retrieval system
