Cotesia glomerata: 123266962
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Entry
123266962 CDS
T07738
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cglo
Cotesia glomerata
Pathway
cglo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123266962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123266962
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123266962
mRNA degradation factors
5'-3' decay
Decapping complex
123266962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
123266962
NCBI-ProteinID:
XP_044587347
LinkDB
All DBs
Position
LG6:26672915..26678409
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AA seq
804 aa
AA seq
DB search
MADSFFGFDTSVPGGGLDDAIECPLDEDDIVEEDEYDALNDETFGSATDDDWEKNHEKLA
QIAESTRLQKQLINHKNGIDVDIEGSFPHLVMDEKDGIVPRPGVWDSPSNFPVVPPNPSL
PVALKNVCTVEELERGLRPPPGLVKPSTPQPTNINIVNNINTTTNQTPSAQQLPLPRPGG
QFSLDYPMINDLTANLRANLLNNMPRFPPGLTMPGQHQHQHQHPVILPPNVRLPNAPLLP
NTRPLAGNPAATAAAAAAAAANLLRYPLPPHLMIPHNNQRQPMHGNFSVGNFPQPPRPNL
PPNLPQFMRPEHPLMSAFPNNLPNHHPHHQQQQHIQQQQQQQQNQLHLHLQQHQQSNNQQ
RNHNRPTYQTNDQSSSNNHQPFFKNNQNWNQNRNNQRYHHNNYNNYHNGLNENGEYDEYA
GMMSNREKQWLINIQLMQHNTNQPYFDDYYFTVFCDRQNKKNNESPDNKDNKKQNKNGYR
DRDKDQSQHILTKVVYTPTQFENSLGKLQCGSVTAPRKIIDMDVVASSDPQQNQASQHKD
MKKARQRLLEIERLYTVQLKLEDVNNPLALLAEQQALQQQQQQQQQVDQEPEKPVKKTAA
ELINIMLTSILQLLKEDKLSSILSIRKGKALLLRFLPFLSVTEYTQQLGEFWVGFIRGLA
VISRRDANILIRFFPEFHRWIETVDGFEVLLRLAKGFLDSVNQPNKNNNSLALAVTNKFG
VSVLASLLERAETLYPNEDNASCSEWSSFIVTLADTIGSSPPSIAPCHPIPANTLNEHLQ
RIRGLTIERYAPLESLLTDANLSR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggatttgatacttctgtaccaggtggtggcctagatgacgct
atagaatgtccgctagacgaggacgatatcgtcgaagaggacgagtacgatgcattgaac
gacgagacatttggctcggctaccgatgatgattgggagaagaatcatgaaaaattagcc
caaattgctgagtctacaagattgcaaaagcaattgattaatcacaagaatggcattgac
gtggatatcgaaggaagttttcctcacttggtcatggacgagaaagacggcattgtccca
agacccggagtatgggacagcccatcaaacttccccgtagtcccaccaaatccatctcta
ccagtggccttgaaaaacgtttgcaccgtcgaagaattagagcgtggattacgaccacct
cccggtctagtaaaaccatcaacaccacagccaacaaacataaatatcgtaaacaatatc
aacacaacgacaaaccaaactccgtctgcacagcaattaccactaccccgaccggggggt
caattttctctagactacccaatgataaatgacctaaccgccaatttacgtgcaaactta
ctaaacaacatgccgcgatttccaccgggtctcaccatgcccggccaacaccaacaccaa
caccaacacccagtgatccttccaccaaacgtgcgactgccaaacgcaccactgttgcca
aatactcgacctttggctgggaatccagcagcaaccgcagccgcagctgcagccgcagcg
gctaatttactgagataccctttgccgccgcatttaatgatccctcacaataaccagcgg
cagccaatgcacggtaatttttcagtcggtaattttcctcaaccaccgcgacctaattta
ccgcctaatttacctcaatttatgcgaccagagcaccctctgatgtcggcgttccctaat
aatttaccgaaccatcacccacatcatcaacagcaacaacatattcaacaacagcagcag
cagcagcaaaatcagcttcatcttcatcttcaacagcaccaacagtctaataatcagcag
cggaatcacaacagaccaacttatcaaacaaacgatcaatcttcatcaaataatcatcaa
ccatttttcaaaaataaccaaaattggaaccaaaatcggaataatcaaaggtaccatcat
aataattacaataattaccacaacggattaaacgaaaacggagagtacgacgaatacgca
ggtatgatgagcaatcgggaaaagcaatggctgattaacattcagctgatgcagcacaac
actaatcagccgtactttgatgattattacttcactgtattttgtgatcgtcagaataaa
aaaaataatgaaagtccggataataaggataataaaaaacaaaataaaaatggataccgt
gatagagataaggatcagtctcagcatattttgacaaaagtagtctacactccgacccag
tttgaaaactcacttggtaaattgcagtgtggaagtgtcaccgctccgaggaaaataatt
gacatggatgtggtggctagcagtgatccgcagcagaatcaggcgtcgcagcacaaagat
atgaagaaggcaaggcaaagattgttggagatagaacgcttgtatacggttcagctgaag
cttgaggatgttaataatcctttggctttgttggctgagcagcaagctcttcaacagcag
caacagcagcagcagcaagtggatcaggagcctgaaaagccagtgaagaaaactgcggca
gaactgatcaatattatgctaacttcgatactccaattgttaaaagaagataaattgtcg
agtattttgagcatcagaaagggaaaagctttgttgttacggtttttaccgtttctcagt
gttactgagtacactcagcagcttggggaattctgggtgggattcattcgtggtctggcg
gttattagtcgtcgagatgctaatattcttatacggttttttccggagtttcataggtgg
attgaaactgttgatgggtttgaggttttactacgcttggctaaaggctttttagattct
gtcaatcagccaaataagaataataatagtttggcgctggctgttacaaataagtttgga
gtatccgtgctagcctcgctattggaaagagcagaaactttgtatcctaacgaagacaac
gcatcatgtagtgaatggtcatcattcatcgtaacactagcagacactattggatcatca
ccaccaagtattgcaccctgtcatccgattcctgcaaacacactcaatgagcacttgcaa
agaattcgtggtcttacaattgaaaggtatgcgccattagaatctttattaacagatgct
aatctatctcgatag
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