Cotesia glomerata: 123267710
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Entry
123267710 CDS
T07738
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cglo
Cotesia glomerata
Pathway
cglo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123267710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123267710
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123267710
mRNA degradation factors
3'-5' decay
Pan complex
123267710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
123267710
NCBI-ProteinID:
XP_044588443
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Position
LG6:complement(22080866..22091691)
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AA seq
604 aa
AA seq
DB search
MDPSMFVTYSPQANVVPLESKLATYMNRQSPATTLNANVVTKHLSNLSLESNKKATASPE
FVPGRGLAGSTSSSPNLFANSYHSQENVGGTTYFYVNNTADNVADDGNEVIGNSQVGYVY
PNTPGHLQATKPIKVPAANSTSAPSTPPPPQVNSSFFMSTNLRMDILHKNSLTLSQPNPA
QFPDLPTEVDNYHELCPLEPIHKPASTVLGYQTSTYKATSLKNGVRYCLRRVHDFRLGNT
KCMVLVDMWKRISHTNVVQLLEVFTTKAFGDNSIVFVYDYHPGAETLLSKHFSGTELNGY
ADPFCSDPNAPRPYSHTKNTILRQQHSSMLPESVIWSYIIQLTAALRVIHSGGVAYRCLD
PTKVLLTSRNRLRLSCAAVPDVVTFDGNAANPLSLILHYQQEDLIALGKLVLALACRSLL
AVHRDNIQASLELVARSYSTDLRNFILYLLSDQARKSVTDLMPMIGARFYTQLDAVQQRA
DVHENELAKELENGRLFRLLVKLATINERPELNMELTWAETGDRYMLKLFRDYVFHQVTP
NDRPWLDMAHVVSCLNKLDAGSPDKICLMSRDEQSVLVVSYAELRQCLENSFDELVQAAK
DAVV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggatccatcaatgtttgttacttactcaccgcaggcgaatgtcgtcccgttggagtca
aagcttgctacttatatgaaccgccaaagtccagctacgacgcttaatgccaatgttgtg
acgaaacatctgtctaacttgtctctggagtcgaataaaaaagcaacagcaagtccagag
tttgtgccaggacgtgggttagctggtagcaccagcagctcgccgaatctttttgctaat
tcatatcattcccaggagaatgtcggaggaacgacgtatttttatgttaataatactgct
gacaatgttgctgatgatggaaatgaagtcatcggcaacagtcaggtaggatatgtttat
ccaaatacaccaggacaccttcaagcaacgaaaccaataaaagtaccagcagcaaacagt
acatcagcaccgtccacgccaccacctccccaagtaaattcgagtttttttatgagcacc
aatctacgtatggatatcctccacaaaaattcgctgacgttaagccagcccaatccagca
caatttcccgacttgccaacggaggttgataattaccacgagctttgtccattggagccg
attcataaacccgcttcgactgtgttggggtaccaaacttctacctataaagctactagc
ttgaaaaatggagttcgttattgtctacgtcgtgtccatgattttcgacttggcaataca
aaatgtatggtactagtagacatgtggaagcgcatatctcatacaaacgtggttcaactt
ctcgaagtttttacaacaaaagcatttggcgataattctatcgtatttgtgtacgactat
catcctggcgccgagacacttctcagcaaacatttctcagggacggagttaaacggatac
gctgatccgttctgttcggaccctaatgccccacggccatacagtcatacgaaaaataca
atattacggcaacaacactccagcatgctcccagagagcgttatttggagttatataata
caactaactgctgcattacgagttatacattctggtggagtagcgtatcgatgtttagat
ccaacaaaagttttactgacatcacgaaatcgtttgcgtttaagttgcgcagcagtaccc
gatgtcgtgacattcgacggtaacgcagcgaacccattgtcgcttattcttcattatcag
caagaagatcttattgctcttggaaaattggtattagcattagcatgccgcagtttattg
gccgtccatcgtgataatattcaagcgtcacttgaacttgttgcacgttcttattcaaca
gatctccgtaattttattctatatttgctgtcagatcaagcacgaaaaagtgtaacggat
ctaatgccgatgatcggagcacgtttttacactcaattggacgctgtccagcagcgggct
gacgtccatgagaacgagctggctaaagagctcgagaatggtcgactgttcaggttactg
gtgaaactcgcgactatcaacgaaaggccagagcttaatatggaattaacatgggccgag
accggcgatcggtatatgttgaagttatttagagactacgtttttcaccaagtcacccct
aacgatcgtccctggctcgatatggcacacgtcgtgtcctgtcttaataaacttgatgcc
gggtctcctgacaagatttgtctaatgtcgcgtgacgagcaaagtgtattggttgtaagt
tacgccgagctgagacaatgcttggagaattcatttgatgagctcgttcaggccgctaaa
gatgccgtcgtctaa
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