Cotesia glomerata: 123274209
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Entry
123274209 CDS
T07738
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cglo
Cotesia glomerata
Pathway
cglo03018
RNA degradation
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123274209
09123 Folding, sorting and degradation
03018 RNA degradation
123274209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123274209
03041 Spliceosome [BR:
cglo03041
]
123274209
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123274209
mRNA degradation factors
5'-3' decay
Lsm complex
123274209
Spliceosome [BR:
cglo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123274209
Complex C
U2 snRNP components
123274209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
123274209
NCBI-ProteinID:
XP_044597693
LinkDB
All DBs
Position
LG1:complement(34624398..34626259)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMQSVKNC
FIRGSVVRYVQLPHDEVDTQLLQDAARKETTVQTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttattcatttttcaaatctctgatcggtaaagacgtcgtggtggaattaaaa
aatgatctcagtatttgcggtactcttcattcagtagatcagtatttaaatattaaatta
actgacatcagtgtcacagatccagataaatatccacacatgcaatcagtaaaaaattgt
ttcatccgaggatctgtcgtccgatacgtccaattgccgcacgatgaagtagacactcag
ctgttgcaagacgcagcccgaaaagagactacggttcaaactcgctaa
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