Corynebacterium glucuronolyticum: I6J20_05005
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Entry
I6J20_05005 CDS
T07375
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cglu
Corynebacterium glucuronolyticum
Pathway
cglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J20_05005 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cglu03021
]
I6J20_05005 (rho)
03019 Messenger RNA biogenesis [BR:
cglu03019
]
I6J20_05005 (rho)
Transcription machinery [BR:
cglu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I6J20_05005 (rho)
Messenger RNA biogenesis [BR:
cglu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6J20_05005 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
SAP
NACHT
AAA
S1CSD-TOTE-2
AAA_22
AAA_25
SAP_new25
Motif
Other DBs
NCBI-ProteinID:
QRO83486
LinkDB
All DBs
Position
complement(1166881..1168827)
Genome browser
AA seq
648 aa
AA seq
DB search
MTDNVDLSTLKLSELKQIAQEKGIKGVSGLRKQALIDRLAAELNGDSEPRREASKPRRAT
RKAQSMGKAQSEPAATIVEESEPENQSPAEESSTQDAQEENSESNTSDRHDGAHQSRSQA
RRARRVRQKMNHRRNRDGRDDADNNGGKSDNRRRNQNNDENDSHRNDSHGGDNRHSSDNR
GSDNRDSDARQGAEDRHEGNGSEHKDKNERNDRNDRDNNRRGGRGRQRNERNDKNDHTGE
NEESQPMQQIAGILDIIDSSIAFVRTTGYQAGSQDVFVPQQMIRRYGMRRGDYIQGAIRA
PREGANQDSNNNHNNRGRGRNNNRGRQKNNALQRVDAINMLPPENAKQRPEFSKLTPLYP
NQRLRLETQPNILTTRVIDLVMPIGKGQRALIVSPPKAGKTTVLKTVANAISANNPECHL
MVVLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTAVAELAIERAKRLVELGSDVVVLL
DSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETG
SAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDINPSGTRKDDLLLAPDEAKLVHKLR
RIMSALDSQAAIDLLIKQLKKTKSNREFMRALATSAPMTAGETEEDYI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaatgtggatctgtcaacgctgaagctctccgagctcaagcagatcgcccag
gaaaaggggatcaaaggggtatctgggctccgtaagcaggcgctcatcgatcgactggca
gccgaactgaacggggatagtgagcccaggcgtgaagcgtccaagccacgccgggctaca
cggaaagcacagtccatgggcaaggctcagtccgagcccgctgccacgatcgtggaagag
tctgagccagaaaaccagtctcctgcagaagaatcttctacacaggatgcgcaggaagaa
aacagcgagtccaacacttctgaccgccacgatggtgcccaccagtcgaggtcacaggcc
cgtcgtgcgcgccgggttcgccaaaagatgaaccaccgtcgaaaccgtgatggccgtgac
gatgcggataacaacggtggtaaaagtgacaaccgccgtcgcaaccagaacaacgacgag
aacgattctcaccgcaatgattcgcacggtggagacaatcgtcattcctccgacaaccgt
ggatctgacaaccgtgattcggatgctcgccaaggtgccgaggaccgtcacgagggcaac
ggtagcgagcacaaggacaagaacgagcgcaacgatcggaatgaccgtgacaacaatcgt
cgcggtggacgtggtcgccagcgtaacgagcgcaacgacaagaacgatcacacaggggag
aacgaggaatcccagccgatgcagcaaatcgctggcattctggacatcatcgattccagc
atcgcctttgtgcgtacgacgggataccaagcaggcagccaggatgtcttcgttccccag
cagatgattcgtcgctacggaatgcgtcgcggcgattacatccagggtgctatccgcgca
ccgcgtgagggcgcgaaccaggattccaacaacaaccacaataatcgtggtcgcggtcgc
aataacaatcgcggtcgccagaagaacaacgctttgcagcgtgtggatgcgatcaacatg
cttccgccggaaaacgccaagcaacgtccggaattctccaagctcacgccgctgtacccg
aatcagcgcttgcgactggaaacgcagccgaacattcttaccacgcgtgtcatcgacctt
gtcatgccgattggtaaggggcagcgcgcactcatcgtctccccgccgaaggctggcaag
accaccgtgctcaagaccgtggccaacgcgatctccgcaaacaacccagagtgccacctc
atggtcgtgctcgtggacgagcgccccgaggaagtcacggatatgcagcgcagcgtcaac
ggcgaggtgatcgcctccacgtttgaccgcccgccgtcagagcacaccgccgtggcggaa
cttgccattgagcgcgcaaagcgcctggttgagctcggcagtgacgtggtcgttctcctg
gattccattacccgcctcggccgcgcgtacaacaactcgtcaccggcctccgggcgcatc
ctatccggtggtgtggattccaacgccctgtacccgccgaagcggttccttggcgctgcc
cgcaatatcgaaaacggtggttcgctgacgatcatcgctacggctatggtcgagaccggc
tccgccggtgacaccgtcatcttcgaggagttcaagggcaccggtaacgcagagttgaag
cttgatcgcaagatcgccgagcgccgtgtgttcccggctgtggacatcaacccgtcgggt
acccgcaaggacgatctccttctcgctcccgatgaggccaagcttgtgcacaagctgcgt
cgtatcatgagcgcactggattcgcaggccgcgattgacttgctcatcaagcagctgaag
aagacgaagtcgaaccgcgaatttatgcgagcgctggccacgtccgcgccgatgacagcg
ggtgagacggaggaggattacatctaa
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