Corynebacterium glucuronolyticum: I6J20_05200
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Entry
I6J20_05200 CDS
T07375
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cglu
Corynebacterium glucuronolyticum
Pathway
cglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J20_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglu03019
]
I6J20_05200
03009 Ribosome biogenesis [BR:
cglu03009
]
I6J20_05200
Enzymes [BR:
cglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6J20_05200
Messenger RNA biogenesis [BR:
cglu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J20_05200
Ribosome biogenesis [BR:
cglu03009
]
Prokaryotic type
rRNA helicases
I6J20_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Terminase_3
Cas3-like_C_2
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
QRO83514
LinkDB
All DBs
Position
complement(1216968..1219124)
Genome browser
AA seq
718 aa
AA seq
DB search
MSNPENASGGVNEPDNVISSDTQETSHGVADDTATISSTDYSENDVPTADVSAEDVIVSE
HVEGNEDTRDAEGQASTESETTDDASSTQSADDEDARAAENSEGTDSTDLSFDKLGLPSD
ILEAVKKVGFETPSPIQARTIPALLDGRDVVGLAQTGTGKTAAFALPIIARIDKSNRSPQ
ALVLAPTRELALQVADAFQEFADHVGGINVLPIYGGQAYGIQLSGLRRGAHIIVGTPGRV
IDHLKKGSLDISHLDYLVLDEADEMLNMGFQEDVERILEDTPDKKQVALFSATMPNAIRR
LSQQYLDDPYEVTVKAETRTNTNISQRYLNVAHRNKLDALTRILEVTEFEAMIIFVRTKY
ETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVDRISH
VLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATLEEMQLPTV
DEVNESRKEKFADSITEALEDSQLGLFRSLVKQYSDAHDVPLEDIAAALAAQAQSNEEFL
MKEPPKDKRRERRDRDRDGGRRQRDNGPARPDSDFEIYRLQVGRRDHVRPGAIVGAIANE
GGLSNRDFGRIDIQQSFSLVELPKGLGDDVLDRLADTEIGGRNIEIRRDPDGYISRGNRS
GGRGNRGGYGRGGRDRGGRDRGDRNDRGGYGRSDRRNGRGNWRDRNDRRGGGRGRDRY
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcccgaaaacgcctccggcggcgtaaacgagccggataacgtaatttcgtcg
gacactcaggaaacttcgcatggcgtcgcagacgacaccgctaccatttcttccaccgac
tactccgagaacgatgttcctaccgcagacgtgtctgcggaggacgttatcgtttctgag
cacgtcgaagggaatgaggatacgcgggacgcagagggccaggcatctactgaatcggaa
accaccgatgatgcctcctccacacagtctgcagatgatgaagatgccagggctgcggaa
aattctgagggcaccgactccactgacctatcctttgacaagctgggtctgccttcagac
atcctcgaagccgtgaagaaggttggcttcgaaacaccgtcacctatccaggcgcggacg
attcccgctctcctggacgggcgcgatgttgtgggcctagcacaaaccggtacgggcaaa
acggcggccttcgcgttgccgatcattgcccgtatcgacaaatccaaccgatcgcctcag
gcgctcgtgttggcaccgacccgtgagcttgctctccaggtggcggatgcattccaggaa
ttcgctgaccacgtaggcggaatcaacgtcctgccgatttacggcgggcaagcctatggc
atccagctgtcaggcctgcgtcgtggtgcgcacatcatcgtgggtaccccgggccgtgtc
atcgaccacctgaagaaggggtccctcgacatttcgcacctggactatctcgtcctcgac
gaagcggacgagatgctcaacatgggcttccaagaggatgttgagcgcatcctggaggac
accccagacaagaagcaggtggcgctgttttcggcgaccatgccgaatgcgattcgtcga
ctctcccagcagtacctggatgatccgtacgaggtcacggtcaaggcagagacacgaacc
aacacgaacatctcacagcggtatttgaatgtcgctcatcgcaataagctggatgcactg
acccgcattctcgaggtcactgaatttgaggcgatgatcatcttcgtccgtacgaagtac
gagacggaggagctcgccgagaagcttcgtgcacgtggtttttccgcacaggcaatcaac
ggagatatcgcgcaacagcagcgtgagcgcacggtagaccagctgcgcgacggtcgcctg
gacatccttgttgcaaccgatgtcgcggcgcgtggtctggatgtggatcgcatctcccac
gttcttaactacgacattccgcatgacacggagagctacattcaccgcattgggcgcacc
ggccgcgctggccggaccggcgaggcgattctgttcgtcacgccacgtgaacgccgtatg
ctccgctcgattgagcgcgtgaccaacgcgacccttgaggaaatgcaacttcctacagtg
gacgaggtaaatgagtcccgcaaggagaagttcgcagactccatcacggaggcgctggaa
gattcccagcttggtctgttccgtagcctcgtgaagcagtactcggatgcgcacgatgtg
ccactcgaggacattgctgcagcgttggcggcgcaggctcagtccaacgaggaattcctc
atgaaggagcctccgaaggacaagcgacgggaacggcgcgatagagaccgcgacggtgga
cgtcggcagcgtgacaacggacctgcacgtccggacagtgattttgaaatctaccgtctt
caggtgggtcgtcgcgatcacgtacgcccgggtgcaatcgttggcgctattgctaacgaa
ggtggactgtctaaccgcgacttcggtcggatcgacatccagcagagcttctcgttggta
gagcttcccaaggggcttggcgacgatgtcctggatcgcttggctgacacagaaatcggt
ggtcgcaacatcgagatccgtcgggatccagatggctacatctctcgtggtaaccgcagt
ggtggccgaggcaatcgcggtggctacggtcgcggtggtcgtgaccgaggtggccgtgac
cgcggagatcgcaacgatcgcggtggctacgggcgtagcgatcggcgcaacggtcgtgga
aattggcgtgatcgcaacgatcgccgtggaggcggtcgcggtcgggatcgctactaa
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