KEGG   Corynebacterium glutamicum MB001: cgp_0968
Entry
cgp_0968          CDS       T02791                                 
Name
(GenBank) putative ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cgm  Corynebacterium glutamicum MB001
Brite
KEGG Orthology (KO) [BR:cgm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgm03400]
    cgp_0968
Enzymes [BR:cgm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     cgp_0968
    5.6.2.6  RNA 3'-5' helicase
     cgp_0968
DNA repair and recombination proteins [BR:cgm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    cgp_0968
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII AAA_25 DUF6406 PhoH Thiolase_C
Other DBs
NCBI-ProteinID: AGT04843
LinkDB
Position
902938..907500
AA seq 1520 aa
MAKSILSRFRPQVAEWFRDVFASPTPVQEGTWEAVSKGKNALVVAPTGSGKTLAAFLWAL
DSLTEQTGQQVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLTGIARTASRMGL
DVPNITVAVRSGDTPSAERARQVRKPPDILITTPESAYLMLTSKAGATLSDVDVVIIDEI
HAMAGTKRGVHLALTLERLEKLVGRPVQRVGLSATVRPLETVAGFLGGGRPVEIVAPPAE
KKWDLTVTVPVEDMSDLPVQEPGSTIGELVMDDPLGITGESALPTQGSIWPHIEQQVYNQ
VMSAKSTIVFVNSRRSAERLTSRLNEIWAMEHDPESLSPQLRRDPAQIMSSADVAGKAPQ
VIARAHHGSVSKDERATTETMLKEGRLRAVISTSSLELGIDMGAVDLVIQVESPPSVASG
LQRVGRAGHTVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEEIHVPKNALDVLAQQTV
AAVSIKDVQVDEWYETIRKAYPYRDLAREVFDSVIDLVSGVYPSTDFAELKPRVVYDRVS
GVLEGRPGSQRVAVTSGGTIPDRGMFGVFLVGDGPRRVGELDEEMVYESRVGDVFTLGAS
SWRIEEITRDQVLVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRSTLTDPSSSGLEG
WAHDNLIAFLQEQEESTGVLPDEKTLVLERFKDELGDWRIVLHTPYGRGVNAAWALAVGA
KIAEETGMDAQAVAGDDGIVLRLPEGDEDPSAALFMFEAEEIETLVTEQVGNSALFASRF
RECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECLQDVYDLPA
LKNLIEDLQLRKVRIAEVTTQQPSPFASALLFNYTGAFMYEGDSPLAEKRAAALALDPAL
LAKLLGEVELRQLLDPDIIAEVHQQLRRQGDRAARNNEELADSLRILGPIPLDELGEHIT
FENPDLEDRAMTVRINGREHLAQVLDAPLLRDALGVPVPPGVPAQVETITDALEQLVNRW
VRTRGPFTANDLAEAFGLGIATAITALQSAPVIEGRYRQGVDVQEYCATEVLSIIRRRSL
AAARKQTRPVSQSAFARFLLDWQQIAPVGATPELRGVDGTYTVIEQLAGVRLPASAWEDL
VLPRRVADYSPIHLDELTSNGEVLIVGAGQAGSRDPWISLLPVDYAAQLVGEASTSMSPL
QDAVLDQLRAGGAFLFSDILEENFGYTTAQLQEAMWGLVEAGLVSPDSFAPIRARLASGT
TAHRAKRRPARSRLRTRTSFASDVPPDMRGRWTLSVQPADATSRSVAHGEGWLDRYGVLT
RGSVVAEDIVGGFALAYKVLSGFEESGKAMRGYFIEGLGAAQFSTPAIIDRLRGHDDSPD
VEGWPSGATDPDVYLIAAADPANPYGAALPWPEQGPSRAAGAMVVLCDGLLLAHLTRGGR
TLTVFSDNIPKIATALITYERLTVEKINGDNVFDSPLLEQFRKHGATITPKGMRFRPPVA
RETPSDTLPTRTFRGGFGRR
NT seq 4563 nt   +upstreamnt  +downstreamnt
atggctaaaagcattctttcccgattccgacctcaagtagcggagtggttccgggatgtc
tttgcatctccgacccctgttcaggagggaacgtgggaggcggtatctaaggggaagaat
gccctcgtggtggcgccgaccggtagtggtaaaaccttggctgcgtttttgtgggcgtta
gattccctcactgaacaaacaggtcaacaggttttagacacgggaacaccggtgcctgtt
cgtggtgggaaagtgaaagtgctctacatttccccactcaaagcgcttggcgtggatgta
gaaaataatctgcgtgcaccgttgaccggtattgcgaggactgcctctcggatgggtttg
gatgtgcccaatatcactgtggcggttcgttcgggtgatacgccatcggcggagcgggcc
cggcaggtgcgtaagcctccagacattttgatcaccactccggagtcggcgtatttgatg
ttgacctcaaaagcgggggcgaccctttcggatgttgatgtggtgatcatcgatgaaatc
cacgccatggccggaaccaaacggggagtgcatctggcgttgacgctggagcgtttggaa
aagctcgtggggcggcctgtgcagcgagttggtttgtctgcaacggtgcgtcctttggaa
acggtggcgggtttcttgggcggtggcagacccgttgagattgtggctccacctgcggag
aaaaagtgggatctcactgtcactgtgccggtggaagacatgtcggatttgccggttcag
gagccgggatcaactattggtgaactagtcatggatgatccgttggggattactggcgaa
tcagcgctgcctactcaaggctcgatttggccacacattgagcagcaggtgtacaaccag
gtgatgtcggcgaaatcgaccatcgtgtttgtaaattccaggcgttccgcggagcgttta
accagtcggttgaatgaaatctgggcgatggaacacgatccggaatcgctgtcgccgcag
ctgcgaagagatccggcgcagattatgtcgtcagcggatgtggcaggaaaagcaccacag
gtgatcgcacgtgcgcaccacggatccgtatccaaagatgaacgtgccaccaccgaaacc
atgctgaaggaaggtcggttgcgcgcagttatttccacctcctcgctggagttgggcatt
gatatgggtgccgtggacctggtgattcaggtggaatcgccaccgtccgtggcaagtggc
ctgcagcgcgtggggcgtgcggggcacacggtgggggcgacgtcgataggctccttttat
cccaagcaccgctccgacttggtgcaaaccgcggtgaccgtgcagcggatgaaggaaggg
ctgatcgaagagatccacgtgcccaaaaacgcgcttgatgtactggcacagcagacggtg
gcggctgtctcgattaaagatgtgcaggtcgatgagtggtacgagactattcgcaaggcg
tatccgtaccgggatttggcgcgcgaagtcttcgattccgtcatcgacctggtcagcggt
gtgtatccctccacagattttgccgagctgaagccacgtgtggtgtacgaccgggtttca
ggcgtgctggagggccggccaggatcccaacgcgtagcagtgaccagtggcggaacaatt
cccgatcgaggaatgttcggagtcttcctcgtcggcgatggtccccggcgcgtcggcgag
ctcgatgaggaaatggtctacgaatcccgcgtgggcgatgtgtttacgctcggggcgtcg
agttggcggattgaagagatcacccgcgaccaggtactggtcactcccgcgccgggtcac
acgggtcggctgcctttttggacgggcgatgccgcaggccggcccgctgagctgggtaaa
gctttaggcgcttttcgacgctcgaccctcaccgatccatccagctccggcttggaaggc
tgggcgcacgacaacctgatcgcctttttacaggagcaggaagaatccaccggtgtgttg
ccggatgagaagacgttggtgttggagcgtttcaaagatgaactaggcgactggcgcatt
gtcctgcacactccttatggacgaggagtaaacgcagcatgggctttggccgtcggggcg
aaaatcgctgaagagaccggcatggatgcgcaagccgtggcaggtgatgatggcattgtg
cttcggttgccggaaggggatgaagatcccagcgcagcgttgtttatgtttgaggcggaa
gagatcgaaacgctagtgacagagcaggtgggtaactctgcgctgtttgccagcaggttc
cgtgaatgcgccgcgagggccctattgctgccgagacgaaaccccggcaagcgcgcaccg
ctgtggcagcaacgacaacgagcagcacagcttcttgatgtggccagaaagtacccgagt
ttcccgatcattttggaaacagtgcgcgaatgtcttcaagatgtttacgatctgcccgct
ctgaagaatctcattgaggatctacagctgcggaaggtaagaatcgcggaagtcaccacc
cagcagcccagtccttttgcctccgcattgctgttcaattacaccggtgcattcatgtac
gaaggcgacagcccgctcgcagagaaacgtgccgcagcgttggccctggatccggcactg
ttggcgaaattgctgggtgaggtggagcttcgacaattactggatcccgacatcatcgca
gaagtgcaccaacaattgcgcaggcaaggcgatcgtgcggcgagaaacaatgaagaactc
gcagattctttgaggattttaggaccgattcctttggatgaattgggcgaacacatcacc
tttgaaaacccagacctggaggatcgagcaatgactgttcggatcaacggtcgggaacat
ttagcgcaggtcttggatgcacctttgcttcgagatgccttaggtgttcccgtaccgcct
ggtgtgcctgcgcaggtagaaaccattacggatgcgttggaacagttagtcaacaggtgg
gttcgtaccagagggccatttactgcgaatgatttggcagaagcctttggactgggcatc
gccacggcgatcaccgcccttcaaagcgcacctgtgattgaaggccgctaccgacaaggc
gtggacgtgcaggaatactgtgcgacagaagtgttgtcgatcataaggcgacgcagcctc
gcagcagcgaggaaacaaaccaggccggtatcgcaatcagcctttgcgcgattcctgctt
gattggcaacagatcgcaccggtgggcgccacacctgaactccgaggcgttgatggcacc
tacacagtcattgaacaactcgccggtgtacgtcttcccgccagtgcgtgggaagatctc
gtgttgccgcgccgggttgccgactattcaccgatccatctcgatgagctgacctccaat
ggggaagtcctcatcgtgggagcgggccaagccggaagccgcgatccgtggattagcttg
ctgcccgtggattatgcggcgcagttggtgggggaggcgtcgacaagcatgagcccattg
caggacgccgtgcttgaccagctgcgtgcgggaggcgccttcctgttttctgacattctc
gaagagaatttcggctacaccacagcccagctgcaagaagcgatgtgggggctggtggaa
gcaggcctggtcagccctgatagcttcgcgccgatccgcgcgcgcctagcgtcgggaacc
acggcgcatcgggcgaaacgtcgaccagcgagatcccggctgcgcacccgcaccagcttc
gcgagcgacgtgcccccagacatgcgcggacgatggacgctgtccgtgcaacccgccgac
gccaccagccgctccgtcgcacacggcgaaggctggctcgaccgctacggcgtgctcacc
cgcgggagcgtcgtcgccgaagacatcgtcggaggcttcgccctggcctacaaagtgctc
tccggcttcgaagaaagcggcaaagcgatgcgcggctacttcatcgaagggctcggcgcc
gcgcaattctccacgcccgccatcatcgaccgcctccgcggccacgacgattcccccgac
gtcgaaggctggccctccggcgccaccgacccagacgtctacctcatagccgccgccgac
cccgcaaacccctacggcgccgcacttccctggcctgagcaggggcccagccgcgccgcc
ggagctatggtcgtgctttgcgacggactcctcctcgcccacctcacccgcggcgggcgc
accctcaccgtgttctccgacaatatccccaaaatcgcgacagccctaatcacatacgaa
aggctcacggtagaaaaaatcaacggcgacaacgtcttcgactccccactcctggaacaa
ttccgcaaacacggcgccaccatcaccccgaagggaatgcgatttcgaccaccagtggca
cgggaaaccccctcagatacgcttcccaccaggacttttcgtggaggcttcggacggcgc
taa

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