Corynebacterium glutamicum MB001: cgp_0976
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Entry
cgp_0976 CDS
T02791
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgm
Corynebacterium glutamicum MB001
Pathway
cgm03420
Nucleotide excision repair
cgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
cgp_0976
03430 Mismatch repair
cgp_0976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgm03400
]
cgp_0976
Enzymes [BR:
cgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
cgp_0976
DNA repair and recombination proteins [BR:
cgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
cgp_0976
MMR (mismatch excision repair)
Other MMR factors
cgp_0976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
OstA_2
ResIII
YidB
Motif
Other DBs
NCBI-ProteinID:
AGT04851
LinkDB
All DBs
Position
914121..916412
Genome browser
AA seq
763 aa
AA seq
DB search
MNTSPFTPGSPDLIDGLNEQQRAAVEHIGSPLLIVAGAGSGKTAVLTRRIAYLMRYRGVH
PQQILAITFTNKAAAEMRERVSQLVGPVAERMWVATFHSVCVRILRQQAQLVEGLNTNFT
IYDSDDSRRLLTMIAKDLELDIKKFSARTLLGAISNLKNELVTPQEALADAERTHNPYET
VVARAFSEYQSRLRRANAVDFDDLIGETVRIFREHPPVAEYYRRRFRHVLIDEYQDTNHA
QYELISTLVGKPDQDPSELCVVGDSDQSIYAFRGATIRNIEEFERDFSNARTILLEQNYR
STQTILSAANAVISQNENRRPKNLWTALGEGEQIIGYVADNEHDEARFIASEIDNLVDHG
MSYSDIAIMYRTNNSSRALEDVFMRTGVPYKVVGGTKFYERKEIRDIIAYLRVLENPDDT
VNLRRIINTPKRGIGDRAQAFIALHSENNQISFGQALLDAALGKVDLLGARGKNAVIKFN
ELFDALRSELPTMVNEVTGLPDIGQVISRILDITGYKAELEASNDPQDGARLDNLNELVS
VAREFSSDAANRMVNEVPEGEAQPGSLQAFLERVSLVADADQIPDSDNGVVTLMTLHTAK
GLEFPIVFLTGWEDGQFPHLRSLGDAKELAEERRLAYVGITRARKRLYMTRAMLRSSWGN
PVTNPPSRFLQEVPAELIDWRREEPQMSSAWAPRPTRSIPTKTRTNNKQLDLSVGDRVNH
DKYGLGTVLSSDGSGPRATVTIDFGSSGKVRLMLLGGVPMEKL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttctccttttaccccaggttcccccgatctcatcgatggcttgaatgagcaa
cagcgtgctgctgtggagcatatcggttctccgctgctgattgtcgctggtgctggttca
ggcaagactgctgtgttgaccaggcgtattgcttatttaatgcgttaccgtggtgtgcat
ccgcagcaaattttggccattacctttaccaataaggctgccgctgagatgcgtgagcgt
gtcagtcagctggtgggcccggttgcggagcgcatgtgggtggctacgttccactcggtg
tgtgtgcgtattttgcgtcagcaggcgcagttggtggaggggctgaacactaacttcact
atttatgattcggatgattcgaggcgtttgctcacgatgatcgccaaggatctggagttg
gatattaagaagttctcggcgcgtacgttgctgggtgctatttctaatttgaaaaatgag
ttggttactccgcaggaggctcttgcggatgctgaacgcacgcacaatccttatgaaaca
gtcgtggccagggcgttttcggagtatcagagcaggcttcgccgtgccaacgctgtggat
tttgatgatttgattggggagactgttcggattttccgggagcatccacctgttgcggag
tattaccgcagacgtttccgccacgtgctgatcgatgagtatcaggacaccaaccacgct
cagtatgagctgatttctacgctcgtcggcaagcctgaccaggatccgtctgagctgtgt
gttgtgggtgattcggatcagtctatttatgctttccgtggcgccacgatccgcaacatt
gaagagtttgagcgcgatttctccaacgcccgcaccattttgctggagcagaattaccgt
tccacccagacgattctttctgctgccaacgcggtgatttctcaaaatgagaaccgtcga
cctaaaaacctgtggactgcgctgggggagggcgagcagatcattggttatgttgccgac
aatgagcacgatgaagcccgttttattgctagtgagatcgacaatttagttgaccacggc
atgagctattccgacatcgcgatcatgtaccgcacgaacaattcctcgcgcgcactagag
gatgtcttcatgcgcaccggcgtcccctacaaagtagtcggcggcacgaagttctacgaa
cgcaaagaaatccgtgacatcatcgcttacctgcgcgttttagaaaaccccgatgacacc
gtcaacctccgtcgcatcatcaacacccccaagcgcggcatcggcgatcgcgcgcaggcg
ttcatcgcgctgcacagcgagaacaatcagatcagcttcgggcaagcgcttctcgacgcc
gccctcggcaaggtcgacctgcttggagcgcgcggcaagaatgcggtgattaagttcaat
gagcttttcgacgccctccgctccgaactccccaccatggtcaatgaggtcaccggcctg
ccagacatcggccaagtcatcagtcgcatcctcgacatcactggctacaaggcagaactt
gaggcatccaacgaccctcaagatggcgcacgcctagacaacctgaacgagcttgtctcc
gtggcccgcgagttctcctccgacgccgcaaaccgcatggttaatgaagttccagaaggc
gaagcccaaccgggcagcttacaggcattcttggagcgagtctccctggttgccgacgcc
gaccaaatccccgattccgacaacggcgtagtcaccctcatgaccctgcataccgccaag
ggccttgaattccccatcgtgttcctcacaggctgggaagacggacagttcccacacctg
cgttcccttggtgatgccaaagaacttgccgaggaacgccgcctcgcctacgtgggtatc
acccgcgcccgcaagcgcctctacatgaccagagccatgctgcgtagctcctggggcaac
ccggtgaccaacccaccgtcacgtttcctccaagaagtgcccgcagaactcatcgattgg
aggcgcgaagaaccccagatgtcttccgcctgggctcctcgacccacccgaagcatcccc
accaaaactcgcaccaacaataagcagttggatctgtcggtgggggatcgcgtcaatcac
gacaagtacggcttgggaaccgtgctctcttcagatggcagcggcccccgagccaccgtc
accatcgatttcggttcctccggcaaggttagattgatgcttcttggtggcgtcccgatg
gagaagctatag
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