Chryseobacterium gallinarum: OK18_00965
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Entry
OK18_00965 CDS
T03954
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cgn
Chryseobacterium gallinarum
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgn03032
]
OK18_00965
03400 DNA repair and recombination proteins [BR:
cgn03400
]
OK18_00965
Enzymes [BR:
cgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OK18_00965
DNA replication proteins [BR:
cgn03032
]
Prokaryotic type
DNA Topoisomerases
OK18_00965
DNA repair and recombination proteins [BR:
cgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OK18_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKK71397
UniProt:
A0A0G3M2Y4
LinkDB
All DBs
Position
224383..225489
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTEIEIITHLKPAKIVKIMKDPEASAKAVHLVYTTDAETAGITRKKTGKKYSYYKDG
EKIKDKDEITRINKLVIPPAWENVWICALENGHLQATGFDAKKRKQYRYHPLWSALRNHT
KFYRMLQFGYALPKIRLHIEQDLALRNFEKRKILALIVSLMQRTNIRIGNNIYEKLYGSF
GLTTLKDKHVEVKGQKITFSFKGKKGIVHHIDLRSKRLARLVQKCKDIPGKELFQYLDDE
GNRHSIDSGMVNEYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENNTEYKKKVKEA
LDIVAEHLGNTTAVCKKYYVHPLVINLYENNTIKKYLDELEVIEENDGKADLTKEEKLVI
KILENEKM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacagagatagaaattattacgcatttaaagccggcaaaaattgttaaa
ataatgaaggacccggaggcttctgcaaaggcggtacatcttgtatataccaccgatgca
gaaacggccggaattacccggaaaaagacaggaaaaaaatattcctactataaggatggt
gaaaaaatcaaagacaaagatgagattacaagaatcaacaaacttgttattcctccggcg
tgggaaaatgtatggatttgtgccctggaaaacggacatcttcaggccaccggttttgac
gctaaaaaaagaaagcagtaccgttatcatcctttgtggagtgctctgagaaatcataca
aaattctacagaatgcttcagttcgggtatgcattacctaaaatcaggctccatatagaa
caggatcttgctctgagaaattttgaaaaacggaaaatcctggccctcatcgtcagcctt
atgcaaagaaccaatatccgtattggtaataatatctacgaaaaactgtatggctccttt
gggctgactactttaaaagataaacacgttgaagttaaaggtcagaaaatcacattttca
tttaaagggaagaaaggcattgtacatcatattgatctcagaagtaaaagattggcaagg
cttgttcagaaatgtaaagatatcccgggaaaagagcttttccaatatcttgatgatgaa
ggaaaccgtcattctatagactcggggatggtgaatgaatacatcaaggaaatcagcgga
gaggattttactgctaaagatttcaggacatggtccggaacggtgagtgcgctgatcgct
tttaaggagatcggatatgccgaaaacaacaccgaatataaaaagaaagtaaaggaagct
ttggatattgtcgccgaacatcttggtaataccacagcagtctgtaaaaagtattatgtg
catcctttagtcatcaatctttatgagaacaatacgatcaaaaaataccttgatgaactg
gaagttattgaggaaaacgatgggaaagctgacctgacgaaggaggaaaaactggtgatt
aagattttggaaaatgagaagatgtag
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