Chryseobacterium gallinarum: OK18_03960
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Entry
OK18_03960 CDS
T03954
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgn
Chryseobacterium gallinarum
Pathway
cgn03030
DNA replication
cgn03430
Mismatch repair
cgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OK18_03960
03430 Mismatch repair
OK18_03960
03440 Homologous recombination
OK18_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgn03032
]
OK18_03960
03400 DNA repair and recombination proteins [BR:
cgn03400
]
OK18_03960
Enzymes [BR:
cgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OK18_03960
DNA replication proteins [BR:
cgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OK18_03960
DNA repair and recombination proteins [BR:
cgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OK18_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HECW1_helix
DUF6346
Motif
Other DBs
NCBI-ProteinID:
AKK71903
UniProt:
A0A0G3M1K4
LinkDB
All DBs
Position
860769..863708
Genome browser
AA seq
979 aa
AA seq
DB search
MLLNLHSYYSLRYGTMSLTELIEHIRTNGYDTAVLTDINNSSATLDFIRLCTDAGIRGLA
GMEFRNDNQLLYVGIAKNEMGFKELNDLMTFANRYKSALPAIAPEFKNVFVIYPFGSISE
TNLKDNEYIGIRPHEVNKFIVAPKKYLERYIILQPVSFKRQDFQLHKQLRAIDNNILISQ
LEQMQVAREDEVFMSLTELNKTYSPVPKLIENTQHLLSECNFNFDFKTSKNRKTFTGNRY
DDKQLLYKYAMDGFGRRYGADDKRAKERVLKELDIIDNLNFSSYFLITDDICRYARSRDF
HYVGRGSGANSIVAYCLGITDVCPIELNLYFERFLNPKRKSPPDFDIDFSWRDRDEMYAY
IFNRYQSEHTALMGAMGTFRDRSIIRELGKVYGLPKSEIDRLIQEPDNMLNKNEVTHTIL
SVYNQMADFPNQRTIHASGVLISDNPLTCYSALDYPPKGLPTVQFDMYVAEDIGFEKFDI
LSQRGIGHIKDCRELIRINKGVTIDTSTPKRFFTDPIIAEQLRSANTVGCFYIESPAMRQ
LISKLRCDNYLTLVAASSIIRPGVASSGMMQAYIERHLNPEKVEYIHPAFKEQLEDTYGI
MVYQEDVMKIGHHFGGLDLAEADVLRRMMSGKYRNVNHLAEIEDRYHSNCREKGYPEHIA
KEVWRQMQSFAGYSFNKAHSASFAVESYQSLFLKTYYPLEFMVSVLNNYGGFYSREVYIN
EARKAGGNICLPCVNKSVYDTSIEGNDIYLGFDCLLNLENKLAQLISEERKRNGDYSSLE
NFHLRTGAGLEQMIILIRSGAFRFLGAGKKELLWEAHLLLNKNRNTHLQVGQLFSTNAEK
PQLPVFVTDELENLYDEIELMGFPVSGSIFDLAKSDYRGNADAKTLASSNGKIVRVVAHL
VASKTVRTKNGSLMKFGTFIDHNGDFIDTVHFTQSLQKSPLRGKGLYLIEGKATVDYDCP
AIEVHRCAMMPIKPDPRSV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgttactcaatctgcacagttattatagtctgcggtacggaacaatgagccttacggaa
ctcattgaacatatccgtaccaatgggtatgatacggccgtgctgaccgatatcaacaat
tcatctgccaccttggatttcatacggctttgtacagatgctgggatacggggtttggca
ggaatggaatttagaaacgacaatcaattgttgtacgtgggcattgccaaaaacgaaatg
ggctttaaggaactcaacgacctgatgacctttgccaaccgctacaaatcggctttgcct
gccattgctccggaatttaaaaacgtttttgtcatttatccctttggctctatttcagaa
acgaatttaaaggataatgaatacatcggcatacgaccccacgaggtcaataaattcata
gtagctccaaagaaatatttggaacgctatatcatcctgcaacctgtatcatttaaaaga
caggattttcaactgcacaagcagttaagggctatcgacaacaatatccttatatcccaa
ttggaacaaatgcaggtagcccgtgaggatgaggtttttatgagcctgacagaactcaac
aaaacatacagtcctgtacccaaactcatcgagaatacccaacatttgttgtcggagtgt
aatttcaacttcgatttcaaaaccagtaagaaccgtaagacctttacagggaaccgttac
gatgacaaacagttattgtacaaatacgcaatggacggatttggcagaagatatggagca
gacgataaacgggcaaaagagcgtgtgctgaaagaactggatattatcgataacctcaac
ttttcaagctacttcttgattaccgatgacatttgccgatatgcaagaagccgggatttc
cactatgtgggcagaggtagcggggcgaacagtattgtagcctattgtttgggcattacc
gatgtttgtcccattgagctgaacctgtattttgaacgttttctaaatccaaaaaggaaa
agtccgcccgattttgacattgatttctcctggagggacagggacgaaatgtatgcttac
attttcaaccgataccagagtgaacataccgccctgatgggtgcaatgggtacgtttcgt
gaccgcagtattatccgtgagttgggtaaggtttacggattgcccaaaagcgaaatagac
agactcatacaagagcctgataatatgctcaacaaaaatgaagtaacccatactatattg
tccgtttataaccaaatggcagattttccaaaccaacggacgatacacgcttcgggcgtt
ttgatttctgacaatccactcacttgttattccgcattggattatcccccaaagggattg
cctacggtacagttcgatatgtatgtagcagaggatattggctttgaaaagttcgatatt
ctttcccaaagaggtatcggacacatcaaggattgcagggagcttatccgcattaataag
ggggtgacgatagatacttcaacccccaaacggttctttaccgaccctattattgcggag
caactgcgttcggcaaatacagtcggttgcttttatatcgaaagtccggcaatgcgacaa
ctgattagtaaattacggtgcgataactacctcacattggtcgctgccagctctatcatt
cgtccgggtgtagcttcatcaggaatgatgcaggcatatatcgaacgccatttgaacccc
gaaaaggttgaatatatccaccccgcattcaaagaacaattagaggacacttatggtata
atggtctatcaggaagatgtgatgaaaatcgggcatcatttcgggggactggatttggcg
gaagccgatgtattgaggcggatgatgagcggtaaataccgaaacgtcaaccaccttgcc
gagattgaggacagataccacagcaactgccgtgagaaaggttatcccgaacacattgcc
aaagaagtatggcgacagatgcagtcgtttgcaggctacagtttcaataaggctcacagt
gcttcctttgccgtagaaagctatcagagtttgtttctgaaaacgtactatccattggaa
tttatggtcagtgtgttgaataattacggtggcttttattcccgtgaagtttatatcaat
gaagcaaggaaggcaggcggaaatatctgtttgccttgcgtaaacaaaagtgtgtacgac
acgagtatcgagggcaacgatatttatctgggcttcgattgccttttaaatcttgaaaac
aagctggcacagcttatctccgaagaacggaaacgcaacggagattattcgagtttggaa
aatttccacctgcgtacaggtgcaggattggaacagatgattatccttatacgctcggga
gcattccgatttttgggtgctggcaaaaaggaattgctttgggaagctcatttgttgctg
aataaaaacaggaatactcatttgcaagtcggtcagttgttttccactaatgctgaaaaa
ccgcagcttcccgtattcgttacggatgaattggaaaacctctacgatgaaattgaactg
atgggatttccggtatcgggtagtattttcgaccttgctaaatccgattataggggcaat
gccgatgcaaaaacattggcatcatctaatgggaagattgtcagagtggttgctcatttg
gtcgcttcaaaaacagtgaggacaaaaaacggctcattgatgaagttcggtacttttatt
gatcacaacggcgactttatagatacggtgcatttcacacaaagcctgcaaaaatccccc
ttacgtggcaaaggactttatctgatcgagggcaaagcaacggtagactatgattgccca
gcaatagaagtacaccgttgtgcgatgatgcccattaaaccagatccaagaagtgtttag
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