Chryseobacterium gallinarum: OK18_04780
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Entry
OK18_04780 CDS
T03954
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cgn
Chryseobacterium gallinarum
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgn03016
]
OK18_04780
Enzymes [BR:
cgn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
OK18_04780
Transfer RNA biogenesis [BR:
cgn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OK18_04780
Prokaryotic type
OK18_04780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKK72042
UniProt:
A0A0G3M4V7
LinkDB
All DBs
Position
complement(1054837..1055574)
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AA seq
245 aa
AA seq
DB search
MRYFIEFSYNGKNYFGYQIQPDAISVQEELEKALSTILREEIKTTGAGRTDTGVHAKKIF
AHFDTGQELNDDLPRRLNSFLPPDISIQRIFKVKDDFHARFDATYRTYEYYISLSKNPFT
QESAWQHWKRSLDIHTMNEACKILFEYEDFTSFAKLKTDSKTNICKMYKAEWEQNGTELK
FTVSANRFLRNMVRAIVGTMVEIGSGKMKPEDLRKVIEDKNRNAAGTSAPAHGLYLVDVG
YEFDE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
ttgagatactttatagaattttcttacaacggaaagaattatttcggctatcagatacag
ccggatgctatttctgtacaggaagaactggaaaaagcgctttccactattttacgggaa
gagattaaaacaaccggagctggaagaaccgataccggtgttcatgctaaaaaaatattt
gcccattttgatacagggcaggagttgaatgatgatcttccgagaagattaaacagtttt
cttcctccggatatttccatccagaggatttttaaggtgaaggatgattttcatgcccgc
tttgatgctacttacagaacgtatgaatattatatttccttgtctaaaaatccgtttacc
caggaatctgcatggcagcactggaaaaggtcactggacatccatacaatgaacgaagcc
tgtaagattttatttgaatatgaagattttacaagttttgccaaattaaaaacagacagc
aaaaccaatatctgcaaaatgtataaagcagaatgggaacagaacggaacagaattgaaa
ttcactgtttccgcaaaccgtttcctgagaaatatggttcgtgctatcgtaggaacaatg
gtggaaattggaagcggaaaaatgaagcctgaagatctccgtaaagtcattgaagataaa
aaccgtaatgccgcaggaacctctgcacccgcgcatggactgtacctggtggatgtaggg
tatgagtttgatgaatga
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