Chryseobacterium gallinarum: OK18_06940
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Entry
OK18_06940 CDS
T03954
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cgn
Chryseobacterium gallinarum
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgn03400
]
OK18_06940
DNA repair and recombination proteins [BR:
cgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
OK18_06940
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_16
AAA_22
ResIII
AAA_30
AAA
FtsK_SpoIIIE
AAA_10
AAA_7
TraG-D_C
Zot
Zeta_toxin
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AKK72405
UniProt:
A0A0G3M188
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All DBs
Position
complement(1549083..1550609)
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AA seq
508 aa
AA seq
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MADKAQFIEELNARYTPKGEHIILGKGMLNGEVVPEVNVTIPLKTINRHGLIAGATGTGK
TKTLQVFAEQLSHAGIPSLVLDIKGDFSGIAEPGVMNTIIEERYAKTQLPYNPQGFPVEL
MSISGGKGVKLRATVTEFGPVLLSKILELNDTQQSIMSIVFKYCDDKGLPLIDLKDLKKV
LQYVTDNAQGKAELAANYGSIAPASLGAILRSIVALEQQGAADFFGELSFDVQDLLATRD
GKGVVNILRVSDIQNKPQLFSTFMLSLFAEIYMTFPEEGDSGKPKLVLFIDEAHLIFDEA
SKALLSQIETMVKLIRSKGVGIYFITQIPGDVPENVLSQLGLKIQHALRGFTAKDKKEIS
KAVENYPTTEYYNASSLIQSLGIGEAFVTALDEKGIPTPLVHTYLISPESRMDVLNEAEV
SELTGKSALVAKYEEALDKESAYEILTSRMEQAAQNPAPTQKTKQVKEEPGMFEQVLQSQ
AGRTFTNTLMREGAKAILGMFGLGGRKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagcacaatttattgaagaattaaatgctagatatactccaaaaggagaa
catattatattagggaaagggatgttgaacggagaagttgttcccgaagtgaatgttacc
attccattaaaaactattaaccggcatggtcttattgcaggagcaacggggaccgggaaa
accaaaacgttgcaggtttttgcagaacagctttcccatgcgggaattccgtcacttgtt
ttagatatcaaaggggatttttcaggaatagcagaaccaggggtgatgaataccatcatt
gaagaaagatatgccaaaacgcaacttccttataacccacaaggttttccggtagaactg
atgagcatttcaggaggaaaaggggtaaagctgagagctaccgttacagaattcgggccg
gttttattaagtaaaatattagaattgaatgatacccagcagagtattatgtcaattgtt
tttaaatattgtgatgataaaggactgcctttgatcgaccttaaagaccttaagaaagtt
ctgcagtacgtcacagacaatgctcagggaaaagctgagctggcagccaactacggatcc
atagcgccggcttctttaggggcaattttacgatcaatcgtcgcattggaacaacaggga
gcagcagatttctttggtgaactaagttttgatgtacaggatttgcttgccacaagagat
ggaaagggagtggtgaatattttaagggtatccgatattcaaaataagccgcagctcttt
tctacctttatgctttcgctttttgcggagatttatatgacatttcctgaagaaggggat
agtggaaaaccaaaactggtattattcattgatgaagcccacctgatttttgatgaagcg
tcaaaagcacttctttcgcaaattgaaacaatggtgaagctgatccggtccaaaggagtt
ggaatttattttattacccagatccctggtgatgtccctgagaatgtgttgtctcagctg
ggactgaaaatacaacatgcgttaagaggctttacagcgaaagataaaaaagaaatttcc
aaagccgtggaaaattatcctacaacagaatattataatgcttcaagtcttatacagagt
ttaggaattggagaggcgtttgttacggctttagatgaaaaaggaatccctactccactg
gtgcatacctatcttatttctccggaatcgaggatggatgttctgaacgaagctgaagtt
tcggaacttaccggaaaatctgctttagtagccaaatacgaagaagcattggataaggag
tctgcttatgaaatactaaccagcagaatggagcaggcagcccaaaatcctgccccaacc
cagaaaacaaagcaggtgaaagaagagccggggatgtttgaacaggtattacaaagccag
gcaggaagaacctttaccaatactttaatgagagaaggggctaaagctattcttggtatg
tttggactgggaggacggaagagataa
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