Chryseobacterium gallinarum: OK18_11615
Help
Entry
OK18_11615 CDS
T03954
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgn
Chryseobacterium gallinarum
Pathway
cgn03420
Nucleotide excision repair
cgn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OK18_11615
03430 Mismatch repair
OK18_11615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgn03400
]
OK18_11615
Enzymes [BR:
cgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OK18_11615
DNA repair and recombination proteins [BR:
cgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OK18_11615
MMR (mismatch excision repair)
Other MMR factors
OK18_11615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKK73179
UniProt:
A0A0G3M2U6
LinkDB
All DBs
Position
complement(2579920..2581599)
Genome browser
AA seq
559 aa
AA seq
DB search
MDYLNEIQKQAVYEYNNGLIVSASPGTGKTKTLVARANKKLTNLPKHKKLALITYTNAAA
DEIASRLDYTENDVFIGTIHRFCLEYILRPFSWIYKWDKPRIASYSDFKEFLEINKLSTI
QLEDLNKIKKNLDGSLIIPTEWLHKITFEELSRIYYDFLKQRKLIDFNEILFRSYIIISK
NLFTAKSVSNIFMEISVDEFQDTNIFQYEILKKIKNNGDTSFFIVGDEKQKIYSFAGALN
ETFTIAKKDFGYEILDLNYTYRSTKKIVTGYSKLFSDHPTLINSSKYKDIPFDIRFHQTK
KDDNNLYIKQIIDSLIKAKAQVGNIAILTTSWFDAYNIGSYLREYFNIIGLGALPHSNIS
NTVFAILKTLSRYSVDSSIRNLKIIKRNIELLILEKNIDFNEKEIVFATNKLISQFQKIN
INTGLKESLLQYQNIISLIFKIDVPEVDEILTIVNDDEALNWNFKKYIETLSGINGITIN
TIHQAKGLEYDFVILNGINENRIPYQRCIDHVKYIYEELTDESIQNGRTLLYVGMSRAKI
GLFILHNWKPSMFISQIKL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggattatcttaatgagattcaaaagcaagcagtctatgagtataataatggcttaatt
gtaagtgcttcaccaggaacaggcaaaacaaaaacattagtagccagagcaaataaaaaa
cttacaaatctgcctaaacataaaaaattagcattaataacatatacaaatgcagcagct
gatgaaattgcatcaaggttagactatacagaaaatgatgtatttattggaactattcat
agattttgtttagaatatattttaagacctttttcatggatatataaatgggacaaaccc
aggattgcatcctatagtgattttaaagaatttttagaaatcaataaattatctacaatt
caacttgaagacctaaacaaaataaaaaaaaatcttgatggctctttaataatcccaact
gaatggctccacaaaattacatttgaagaattatcaagaatatattatgattttcttaaa
caaagaaagcttattgatttcaatgaaatactatttcgttcctatattattatttcaaag
aacttatttactgctaaatcagtatctaatattttcatggaaatttctgtagatgaattt
caggatacaaatattttccaatatgaaattttaaaaaaaataaaaaataatggggataca
tcgttttttattgtaggagatgaaaaacaaaaaatttatagttttgcaggggctttaaat
gaaacattcactattgctaaaaaggattttggttatgaaatccttgatttaaactatact
tatagatcaactaaaaagattgtaacagggtattcaaaattgttttcagatcatccaact
ttaataaactcatcaaaatataaagatattcccttcgatatcagatttcatcaaactaaa
aaggatgacaataatctttatattaaacaaattattgatagtctgataaaagccaaagca
caagttggtaatattgcaatcttaacaacatcttggtttgacgcctataatattggaagc
tacttaagagagtatttcaacattattggattaggtgcattaccacattctaatatatct
aacactgtatttgctatcttaaaaactttaagtagatattcagtagattcctcgattagg
aacttaaaaattataaaaagaaatattgaacttttaatcttagaaaagaacattgatttc
aatgaaaaagaaattgtgtttgcaacaaataaattaataagtcaatttcaaaaaattaat
ataaatacaggattaaaagaatcattattacaatatcaaaatataatatctctgattttt
aagattgatgttcctgaagtagatgagatcttgacaatagtaaatgatgacgaagcttta
aattggaactttaaaaagtatatagaaacattatctggcattaatggtataactataaac
actatacaccaggctaaagggcttgaatatgattttgtaatattaaatggcataaatgaa
aatagaataccataccaaagatgtatagatcatgtaaaatatatttatgaggaattaaca
gatgaatctattcaaaatggaagaactctattatacgttggtatgagtagagcaaaaatt
ggtttatttattctacacaattggaagccttcaatgtttattagtcagattaaattgtaa
DBGET
integrated database retrieval system
