Chryseobacterium gallinarum: OK18_12490
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Entry
OK18_12490 CDS
T03954
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgn
Chryseobacterium gallinarum
Pathway
cgn03420
Nucleotide excision repair
cgn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OK18_12490
03430 Mismatch repair
OK18_12490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgn03400
]
OK18_12490
Enzymes [BR:
cgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OK18_12490
DNA repair and recombination proteins [BR:
cgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OK18_12490
MMR (mismatch excision repair)
Other MMR factors
OK18_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKK73321
UniProt:
A0A0G3M2B2
LinkDB
All DBs
Position
2763697..2766027
Genome browser
AA seq
776 aa
AA seq
DB search
MDYLKGLNESQYEAVTSLQGPLMVLAGAGSGKTRVLTMRIAHLISNGVDPFNILALTFTN
KAAREMKDRIAKVVGDSNARSLWMGTFHSVFARILRIEAHYLGYPSNFTIYDQQDALNVI
KKVLKDMNIDADLYKPKKVQARISTYKNNLITVKAYFNNPELMEADEKANMKFIGQIYQR
YVEACFRNGAMDFDDLLLKTNELLTRFPEVLAKYQDRFRYIMVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAKTVSLEQNYRSTQNIVNAANVV
IAKNLQQFKKNVFSDNEEGDKIKIYRSLSDADEANFVAGNIWELRNRDQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLINENDSEALMRIINYPA
RGIGETTQNKLIVFADAHNISVSKVLDNLPMYAPQLGLNNGVLNKLNDFWSMIKAFQVLL
KTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDPS
LSNFLENIALSADTQDKDQDDDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQAFFSYAISRFQWGKITDAEPSRFLSEIDDEYIEFLNPAMEK
RFINNAGIKSNIFDEHPSEARSFKKVEKKTINREEHSKPAPEPRKLKPVSTAKIINPSGA
SSQDIEVGDKVRHDRFGIGEVTFLDGTDPQNIKAKVVFMHEGEKNLILKYAKLTKI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggactatctgaaaggactcaatgaatcacaatatgaagccgttacctctttacagggg
cctctcatggtacttgcaggagcaggttccggcaaaacacgtgtacttaccatgcgtatt
gcccatttgatcagtaatggcgtagatcctttcaacattctggctctaacctttaccaat
aaggcggcccgggaaatgaaagaccgtatcgctaaggtagtaggggatagcaatgcaaga
agcctttggatgggaacttttcactctgtttttgcaaggattttaagaatagaagcccat
tatctgggatacccttccaattttaccatctatgaccagcaggatgccctgaatgtgatt
aaaaaggttttaaaagatatgaatattgatgctgatctttataaacctaagaaagttcag
gcaagaatttcaacctataaaaacaatctgattaccgttaaagcctatttcaacaatcct
gaactgatggaagctgatgaaaaggccaatatgaagtttatcggccagatttatcaaaga
tatgtagaggcctgtttcagaaatggtgctatggattttgatgacctattgttgaaaacc
aatgagctgctgactcgtttccctgaagtgctggcaaaatatcaggaccggttcaggtat
atcatggtagatgagtaccaggataccaaccattcgcagtaccttattgtgaaggcattg
gcctcaaaatttgaaaatatctgtgtggtaggagatgacgcccagtctatttattctttc
cgtggagcgaatatttataatatcctgaattttaaaaaagattatccggatgctaaaaca
gtatctttggaacagaattatcgctcaacccagaatattgtaaatgcagccaatgtggtg
attgccaaaaatttacagcaatttaagaaaaatgttttcagtgataatgaagaaggagat
aaaatcaaaatataccgttccctttccgatgctgatgaagcgaattttgttgccggaaat
atctgggaacttcgcaacagggatcagaggaaatatagtgattttgctattttatataga
acgaattcacaaacccgggcttttgaagatgccttaaggcgtaaaaatataccgtacaaa
gtatacggtggactttccttctaccaaaggaaagaagtgaaggaccttatcggatacctg
cgtcttttgatcaatgaaaacgattcagaagcattgatgagaattatcaattatccggca
agagggattggagaaactactcagaacaaactgatcgtgtttgcagatgcacacaatatt
tcagtttcaaaagtattggataaccttccgatgtatgccccacagctgggactaaataat
ggagtattaaacaaacttaatgatttctggtccatgatcaaggcattccaggtgctgttg
aaaacggaaaccgcttacagtgttgctatggaagtagcgaagcgaagtggccttatcaag
ttcctgaaagatgatcagactccggaaggaatttccagggtagaaaacgttcaggaatta
atgaactccatgcagggattcattgaagaacaaatgcagctggaagatggtgacccgagc
ctttccaatttcctggaaaatattgcgctttccgcagatacccaggataaagatcaggat
gatgacatggtttctttaatgaccattcacctttcaaaggggcttgagtttccggtagta
catctggtaggacttgaagaaaaccttttcccgagctttatgagttctgcaacccgggaa
gatctggaagaagaaagacgcctgttttatgtagcgctcacaagagctgagaaacaagcc
tttttctcttatgcaatttctcgttttcagtggggaaaaattacagatgcggaaccttca
agattcctgagtgagattgatgatgaatatattgaattccttaatcctgctatggaaaaa
aggtttattaataatgcagggatcaaatccaatatttttgatgaacatccttctgaagca
agaagctttaaaaaagttgagaaaaagaccattaacagggaagaacattcaaagcctgca
ccggaaccaaggaaactgaagccggtgagcacggcaaaaattatcaaccccagtggagcc
tcttcacaagatattgaagtgggtgataaagtaagacatgaccgtttcggaattggcgaa
gtcacttttttggatggtacagatccacaaaatatcaaagcaaaagtagttttcatgcat
gagggagagaaaaacctaatcctgaaatatgcaaaacttactaagatttag
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