Chryseobacterium gallinarum: OK18_14145
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Entry
OK18_14145 CDS
T03954
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgn
Chryseobacterium gallinarum
Pathway
cgn03030
DNA replication
cgn03430
Mismatch repair
cgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OK18_14145
03430 Mismatch repair
OK18_14145
03440 Homologous recombination
OK18_14145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgn03032
]
OK18_14145
03400 DNA repair and recombination proteins [BR:
cgn03400
]
OK18_14145
Enzymes [BR:
cgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OK18_14145
DNA replication proteins [BR:
cgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OK18_14145
DNA repair and recombination proteins [BR:
cgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OK18_14145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF2857
Motif
Other DBs
NCBI-ProteinID:
AKK73590
UniProt:
A0A0G3M4Q0
LinkDB
All DBs
Position
3144221..3148888
Genome browser
AA seq
1555 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQIHDDDGNLVENQDYIIKPEGYDIPF
NAARIHGITTKIAHEEGRDLQEVLEEFSRALEKIRVVSGHNVEFDYNIVGAEFYRKNLKD
NLQEKPRADTMILGTDFCQLGGGKGGRFKPPKLEELYEKLYGNKFDEAHNAAADVNATAR
AFFEMVRIGVVPADVLKISEDQLSYFKSLYPDPIKPFNIVIRRQVADFHNKKKQQDFGSI
DEIDLGKYFNFDNHSVFSTLTATSSINDLIRKATEENFPAVGMVDLGNMMGAFKFVSAVE
AANGDRAKKHKEYLAKKQEAEENGIEFNETEPVSEPLIPVVGCEFYISDRYEQKQFTKDD
PDRRTQVVLLAKDFNGYKNLAKLSSIGFLKGFYFGVPRVSRELIAQYKEGVIALTSGIHG
DIPDAILNTGEQKGEELFKWWKDTFGDDFYVQLQNHKLPEEEHLNEVLLYFADKYDVKIL
AQNETFYTNKDDSNIQDIVSCIKDGEKLSTPVGKGFGKRRGLATGEYYIKNSDEIKEAFL
AYPDAFEAYDEFFAKFKPYTLKRDVLLPKFDIPEEFIHAEDEVDGGKRGEMAYLTHLTYE
GAKRRYVDTGITEEIKERLDFELEVIANTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAA
GSAVAYCIGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDKIIKWVIDKYGQNQ
VAQIITYSVLGGKSAIKDAGRVLDVPIPDTNNIAKLIPSTPGMNIAKALAKYDKLKPEEQ
MLVDEMRYVLDSPGDARHDVLASAKKMEGCIRNTGIHACGVIITPEDVSNLVPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKLVKARYGIDIDPDLIPLDDAKTY
QLFKEGRTIGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMY
PKFIEGGRKNNLNEERLEKIWNDWKAFAEYAFNKSHSTCYAFIAYQTAFLKANYPAEYMA
SVMSNNINNTDSITMFMEDCKSMGVDVLGPDVNESQYKFSVNEKGQIRFGLGAIKGIGEG
PSEAITRERENGRFKNVYDFFERILPSQMNKRVAESLVLAGAFDELGSFHRGQYFDIDMS
GKTNLERLIRYGQSFQESKNEMENSLFADFAEEVQIEQPKLAPCPEWPNMHKLNKEKEII
GFYLSAHPLDEFKYQFQFIQGQLSKKAVLEKDKEEKAITDEAPVLEQDVQDETIDLSEIV
SDELSAGEEEVIQEVVKKAEPKGNFLFLNLDEVDAYKEQAFSNKQEELFEEKKKDWKTLQ
KERENGGGGKEYTVAGLITEYRVQDGFRSGEKVAFVTLEDYSGSYSFRLGDRDYMRLKEK
LEVQRFVIFKIKFAQVKDGRVFVNVVDVIELQEAFERFAKSISLVMDVMDVRPEDLEFFR
TVLERNKGNQKLKFFIKNIDDDSHIEVQSMKHSVDLNGDLIKEIQLLNKYEFYLN
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgacacagaaacaaccggtttaccaaaaaatttcaatgcaccgctt
tcggattcggataactggccaagaatggtccagatagcatggcagattcatgatgatgat
gggaatttagttgaaaaccaggattatataataaaacctgaagggtatgatattcccttt
aatgccgccaggattcacgggattactacgaagattgcccatgaagaaggtagagatctc
caggaagtattggaagaattttccagggctcttgagaagatcagagtagtctcaggacat
aatgtggagtttgattacaatattgtaggggcggaattctacagaaagaatttaaaagac
aatttacaggaaaagcccagagcggatactatgatcttaggaaccgacttctgccagtta
ggcggaggaaagggagggagatttaaacccccgaaactggaggaactttacgaaaaatta
tacggaaataaatttgatgaggcccataacgcagcagctgacgtaaatgcaacagcaaga
gcgtttttcgaaatggtcagaattggagtggttccggctgatgtcctgaaaatatcggaa
gatcagctgagttatttcaaaagcctttacccggatccgattaaacctttcaatattgtt
atccgcagacaggttgccgattttcataataagaaaaaacagcaggatttcggaagtatt
gatgaaattgatcttggtaaatacttcaattttgataaccatagtgttttctcaacatta
acggcgacttcaagcattaatgacctgatcaggaaagctactgaagagaattttccggct
gttggaatggtggacctgggaaatatgatgggcgcctttaagtttgtgtctgcagtagaa
gcggccaatggtgacagagcaaagaagcataaagaatatttagcgaaaaagcaggaagca
gaagagaatggtatagaatttaatgaaacagagcctgtttcagagcccttgatccctgtt
gtgggatgtgagttttacatttcagaccgttatgagcagaagcaatttaccaaagatgac
cccgacagaaggacacaggtggtgcttttagctaaggattttaacggatataaaaattta
gcaaagctttcgagcattggttttctgaaaggattttattttggtgttcccagggtgagc
cgtgagctgatagcacagtataaagaaggggtcattgctttgacttcagggattcacgga
gatattccggatgctattctgaataccggtgagcagaaaggagaagagcttttcaaatgg
tggaaagatacctttggtgatgatttctatgtacagcttcagaatcacaaactgccggaa
gaagaacacctgaatgaggtgttgctatattttgcagataaatatgacgttaaaatttta
gctcagaatgaaacattctataccaataaagacgactccaatattcaggatattgtaagt
tgtatcaaagacggagaaaagctttcaactcctgttggtaaaggttttggtaaaagaagg
gggcttgctacaggagagtattatatcaaaaattccgatgagattaaagaagcattcctg
gcatatcctgatgcatttgaagcctatgacgaattttttgcaaagtttaagccttatacg
ttaaaaagagatgtgctgcttcctaaatttgatattcctgaagagtttatccatgcagaa
gatgaggtagacggtggaaaaagaggggaaatggcataccttacccatttgacttatgaa
ggagcaaaacgaaggtatgtggatacgggaatcacggaagaaattaaggagcgacttgac
tttgaattggaagtaattgctaataccggatatccgggatatttccttattgtacaggat
ttttgtaatgaagcccgtaaaatgggagtttgggtaggtccgggaaggggatctgccgcg
ggatctgcagtcgcttactgtattgggattaccaatgtggatcctattaaatacgatctc
ctttttgagagattcctgaatccggaaaggatttctatgcctgatattgatattgacttt
gatgatgaaggaagggataaaattatcaaatgggtaattgataaatatggccagaatcag
gtagcacagattataacatactctgttctcggaggtaaatctgctattaaagatgcaggg
agggtgcttgatgtcccaatccctgataccaataatattgcaaagcttattccttccaca
ccaggaatgaatatcgccaaagctttggcaaaatatgataaactgaaaccggaggaacag
atgcttgttgatgaaatgagatatgttctggatagtcctggtgatgcccgtcatgatgtg
cttgcaagtgcgaaaaaaatggaaggttgtatcaggaataccggaattcatgcctgtggt
gtaatcattaccccggaagatgtgagtaatctggttccggtaaccattgctgctaaagat
gctgatattctggtttctcaatttgataactcggtggcggaaagtgcaggtcttctgaaa
atggactttcttggtctgaggaccttaacgattatcaaagacgctttgaaactggtgaaa
gcaagatatgggattgatattgatccggatcttattccattggatgatgctaagacttac
cagctgtttaaagaaggaagaacaatagggattttccaatatgaaagccccgggatgcag
aagtatatgagggagcttaaaccaacggtttttgccgatcttattgccatgaacgcattg
tatcgtcccggtccgattaaatacatcccgaactttatcaacaggaagcatggaattgaa
gaaattgtctatgacctgcctgaaaccgaagagtatttaaaagaaacctacggaattacc
gtatatcaggagcaggtaatgcttctgtctcaaaagctggcgaattttacaaaaggtgag
gcagataccctgagaaaagctatgggtaaaaagcagattgatgttcttaacaaaatgtac
ccgaaatttattgaaggaggacgtaagaacaacctgaacgaagaaaggctggagaaaatc
tggaacgactggaaggcctttgcagaatatgcctttaataaatcccactccacttgttat
gcatttatcgcttaccagacggctttcctgaaggccaattatcctgcagaatatatggcg
agtgtaatgagtaataacattaacaatacggattcaatcactatgttcatggaagactgt
aaaagtatgggagtggatgttttaggtccggatgtaaatgaatcccaatataaattttcg
gtaaacgaaaaaggacaaatccgctttggcctgggagctataaaaggtattggtgaaggg
ccaagtgaggctattaccagagaaagggaaaatggaagatttaaaaatgtctatgatttc
tttgaaaggattctgccttcccaaatgaataaaagagtagcggaaagtttagtgctggca
ggtgcttttgatgaattaggttccttccatagaggtcagtattttgatatcgatatgagc
ggaaaaacaaaccttgaaagattgatcagatacggacaaagcttccaggagagtaaaaat
gaaatggaaaattcgctgtttgctgactttgccgaagaagtacagattgaacagccgaaa
ttagccccttgccctgaatggccgaatatgcacaagcttaataaagaaaaagaaattatc
ggtttctacctttccgcacacccgttggatgagtttaaataccagtttcaatttatacag
ggacagctttctaaaaaggcggttcttgaaaaggataaagaagaaaaagcaattactgat
gaggctccggttttagagcaggacgtacaagatgaaacaattgatctttccgaaattgtc
tccgatgaattatcagcgggagaggaagaggtaatacaagaagttgttaaaaaagctgag
cctaaaggaaacttcctgtttttaaatcttgatgaggtggatgcttataaagaacaggct
ttttccaataagcaggaagaattgtttgaagaaaaaaagaaagattggaaaacacttcaa
aaggaaagagaaaacggaggcggcggtaaagaatatactgttgcaggcttgattaccgaa
tatagagttcaggatggctttagaagcggtgaaaaagtggcttttgttacgttagaagat
tattcgggatcttattctttcagattgggtgacagggattatatgagattgaaagaaaag
ctggaagttcaacggtttgtgatttttaaaataaaatttgctcaggtgaaggacggaagg
gtttttgtgaatgtagttgacgtaatagaactccaggaagcctttgaaagatttgctaaa
agtatttctctggtgatggatgtaatggatgtaaggccggaagaccttgaatttttcagg
acggttctggaacggaataaaggaaatcagaaattaaaattctttattaaaaatattgat
gatgattcccatatcgaagttcagtcgatgaagcattcggtagatttgaatggagatttg
attaaagaaattcaattattaaataaatacgagttttatttgaattaa
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