Chryseobacterium gallinarum: OK18_18190
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Entry
OK18_18190 CDS
T03954
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cgn
Chryseobacterium gallinarum
Pathway
cgn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OK18_18190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgn03021
]
OK18_18190
Transcription machinery [BR:
cgn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OK18_18190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AKK74277
UniProt:
A0A0G3MB15
LinkDB
All DBs
Position
4086810..4087676
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AA seq
288 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVELAQRIRAGDRAALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALNTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaatcactaagcaggttaccaacagggaaactgcttcattagacaag
tatttgcaggaaattggtaaagtggaactgattactgcggacgaagaagtagaactggca
caaagaatacgtgcaggcgacagagctgcattggagaaattaatcaaggccaaccttcgt
ttcgtggtttctgtatctaaacaataccaaaatcaaggtctttctttacccgatttgatt
aatgaaggtaacttaggattaatgaaagcggcaaaaaggtacgatgaaactagaggtttc
aaatttatctcttatgcagtatggtggatccgtcaatcaattttacaggcgctggctgag
caatcaagaattgtaaggctaccgttgaacaaaattggctccatcaataaaattaataaa
gcatacgctcaccttgagcaggaaaatgaaagaccaccttctccggaagagctggctgaa
gttcttgacatgagcgaggaggatattaaagaatcgatgaaaaactccggaagacatttg
tctatggatgcgcctttagtagaaggtgaagattctaatctttatgatgtattgcgttca
ggagaatctcctagcccggataaagatctgatgcttgaatctctgcaaattgagattgaa
agagcattgaatactttgacgccaagagaggctgatttagtaagattgtacttcggactg
aacggaaaacacccgatgactttagaagaaattggtgaaactttcgatcttacaagggag
agagttcgtcagattaaagaaaaagcaattaagagactaaaacacaataccagaagcaag
atcctgaaatcttatttgggtaaataa
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