Coriobacterium glomerans: Corgl_0609
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Entry
Corgl_0609 CDS
T01453
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cgo
Coriobacterium glomerans
Pathway
cgo03410
Base excision repair
cgo03430
Mismatch repair
cgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Corgl_0609
03430 Mismatch repair
Corgl_0609
03440 Homologous recombination
Corgl_0609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgo03400
]
Corgl_0609
DNA repair and recombination proteins [BR:
cgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Corgl_0609
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Corgl_0609
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Corgl_0609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
Helicase_C
DEAD
RecJ_OB
DHHA1
ResIII
SecA_DEAD
DUF5789
Motif
Other DBs
NCBI-ProteinID:
AEB06723
UniProt:
F2NBI7
LinkDB
All DBs
Position
718214..721537
Genome browser
AA seq
1107 aa
AA seq
DB search
MASLEGCRRWTMVSGDRRSAGLLAEELGVAPLVARIMVARGISSVRAAKRFLEPSLDRDW
GDPLAIPGMADASMRLARAIEEHESIAIFGDFDVDGITSTCLLTEGLRALGARVQPFIPN
RFGEGYGITETALERVIRACAPSLIVTVDNGIAAGAEVDYLCERGIDLVVTDHHEPGESV
PQGVPVVDPKLEASGCSHELAGAGVALKLVQALGDRSGAPDLWRGLTDLAALGTVSDMME
LTPENRALVADGIARVRDSSRPAFSALASLAGVDLSAMTAEALSFSLIPRLNAAGRLADP
ALALDLLLEWDPVEAGRRAAELEKINTRRRELEAELAEDALALVGRASCIGRVIVAGKEG
WHEGVKGIVASRLVNRFHVPVVLFSIEGGIARGSGRSVGSVNLFDAMSRCADLLIRFGGH
AGAVGATLDAARLPDLRERLAEILDELPAEAFEDRAEIATEVALSELDVKTVAQISVLEP
FGRGNAAPLLAARGVTMIDRAGVGRSADHMRFRATDGIATVPAIMFRAPDVQELCACESA
VDLVFQAIAERWRGQVKTKLLVKDILVRSPAPIRSSAPTAEPRSPLVVETGESVAPRADA
EEASARRARFAALTQEELTTALLQAFIGDGRLHRAQREALDALSQAQSCLAIMGTGRGKS
LVFQVHAVREALRRGRASVLVYPLRALVADQAFHLVGACESFGLTVGVLTGETDSSARES
AFDALASGGLDIVLTTPEFFTIHAERFAASGRIGFVVIDEAHHAGLAKSGQRSAYLDMPR
ALDQMDAPTVLATTATADADVSSEICSLLHIERVVVDESVRANLRLEDGRDLACREDRLV
SIVARGEKCVVYVNSRDRSVALTRMLRKRVPDIAVAIAYYNAGLSRLDRCRVEDAFREGT
LVCIVSTSAFGEGVNLPDIRHVVLYHMPFSAVEFNQMSGRAGRDGETACIHLLYTRRDAR
INENLLDAAAPPREELAVLYRALQTLRQSGRGGADGVSVRAPDGEIAQMCHAIRSTCRID
ERSVDAGISIFEELGLLRVIGFDEHRAIEMGSASVRVELTRSILYLEGLHARLAFSSFMK
WALDAPSRDMLARMNRPITPRAEHAIG
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcttgagggatgcaggcgctggacaatggtttccggcgatcgccgatccgcc
ggactgcttgctgaggagctgggagtcgccccgctcgtcgccagaatcatggtcgcacgc
ggtatcagctcggtgcgcgccgcgaagcgctttctcgagccctcgctcgatcgtgactgg
ggcgatcccctcgcgatcccgggcatggcggatgcgtcgatgcgcctcgcccgagcgatc
gaggagcatgagtccattgcgatattcggcgatttcgacgtcgacggcatcacatcgacc
tgtctgctcaccgagggcctgcgcgcgctcggtgcgcgcgtccaaccgttcatccccaac
cgtttcggcgagggctacggcatcaccgagaccgcgctcgagcgcgtgatccgagcgtgc
gcgcccagcctgatcgtcaccgttgacaacggcatcgccgccggagcggaggtggactac
ctctgcgagcgcggcatcgatctggtcgtgaccgatcaccatgagccgggtgagtcggtg
ccccagggggtgcccgtggtcgatcccaagctcgaagcgagcggctgctcgcatgagctt
gcgggggcgggcgtcgctctcaaactcgtgcaggccctcggcgacagatcgggtgctccc
gacctgtggcgagggctcaccgatctcgccgcgctcgggaccgtatcggatatgatggag
ctcacgcccgagaatcgcgctctcgtcgccgacgggatcgcccgcgtgcgcgactcgtcg
cgaccagccttcagcgcgctcgcgtcgctggccggagtcgatctgagcgccatgacggcc
gaggcgctctccttctccttgatcccgcgcctgaatgcagcgggtcgcctcgccgatccc
gcgctcgcgctcgatctcctgctcgagtgggatcccgtcgaggcgggtcggcgcgccgct
gagctggagaagatcaacacccgccgccgtgaactcgaggcggagctcgctgaggacgcc
ctcgccctggtgggacgggcctcctgtatcggccgcgtcatcgtcgcgggcaaggagggc
tggcacgaaggcgtgaagggcatcgtggcgagtcggctcgtcaaccgtttccatgttccc
gtcgtgctcttctcgatcgagggtggcatcgcacgcggatcggggcgctcagtcggttcc
gtgaacctgttcgatgcgatgagtcgctgcgcggatctgctgatccggttcggcggccat
gcgggtgccgtcggcgccaccctggatgccgcccgactgcccgaccttcgcgagcgtctc
gcggagattctcgatgagctgccagctgaggcctttgaggatcgagctgagatcgcgacg
gaggttgctctctccgaactcgatgtcaagacggtggcgcagatatcggtgctcgagccg
ttcggtcgcggcaacgcggcgcctctgctcgcggcgcgcggagtcacgatgatcgatcga
gccggagtcggcaggagcgcggatcacatgcgtttccgggcgaccgacgggatcgcgacg
gtgccggccatcatgttcagggctccggacgtgcaggagctgtgcgcatgtgagagcgcc
gtcgacctcgtgtttcaggcgatcgccgagcggtggcgcggtcaggtcaagaccaagttg
ctcgtaaaggatatcctggtgcgctcacccgcgccgattcggtcgagcgcaccgaccgcg
gagccgcgctcgccgctcgtcgtcgaaacgggtgagtcggtcgcgcctcgcgcagacgct
gaggaggcgtccgcgcggcgggcgcgattcgcagcgctgacgcaggaggagctcacgacc
gccttgcttcaggcgttcatcggcgacggccggctccaccgagcgcagcgcgaagcgctc
gatgcgctgtcgcaggcgcagagctgtcttgcgatcatgggcaccggccgcggcaagtcg
cttgtattccaggtgcatgccgtcagggaggcgctgcgccgcggtcgcgcgagcgtgttg
gtctatccgctgcgggcgctcgtggcagaccaggccttccatctcgtcggggcatgcgag
tcgttcggtctcaccgtcggagtcctcaccggtgagaccgattcctctgctcgtgagagc
gcgtttgacgcattggcctccggcggactcgatatcgtcttgaccacgccggagtttttc
accatccatgcagagcgcttcgcggcctcagggcggatcggtttcgtcgtcatcgatgag
gcgcatcacgccggtctcgcgaagtcggggcagcgcagcgcctatctcgatatgccaagg
gctctcgatcagatggacgcgccgaccgttctggcgacgactgcgacggctgatgccgac
gtgagttccgagatctgctcgctgctgcacatcgagcgcgtcgtcgtcgatgagtcggtc
cgcgccaacctgcggctcgaggacggacgcgacctggcatgccgagaggatcgcctcgtc
tcgatcgtcgctcgcggcgagaagtgcgtggtctatgtgaactcacgtgatcgctccgtc
gccttgacgcgcatgttgcgcaagcgcgttccggacatcgctgtcgccatcgcgtactac
aacgccggtctctcgcgtcttgatcgctgccgcgtcgaggacgcctttcgcgagggaacg
ctcgtctgcatcgtctcgacttccgcattcggcgagggcgtcaatctgcccgacatccgc
catgtcgtcttgtatcacatgccgttcagcgccgtggagttcaatcagatgagcggacga
gccggtcgcgatggggagacggcctgcatccatctgctgtatacgcgccgcgacgcgcgc
ataaacgagaacctgctcgatgccgcagcgccccctcgagaagagctcgcggtgctgtat
cgggcgcttcagacgttgcgacagagcggccgggggggagccgacggggtcagcgttcgc
gcgcctgacggggagatcgcgcagatgtgccatgccattcggtcaacatgccgcatcgat
gaacgcagcgtcgacgcgggcatctccatcttcgaggagctcggtcttctgcgcgtcatc
ggattcgacgagcatcgcgccatcgagatgggctcggcgtccgtgcgcgtcgaactcacg
cgctcgattctctatctcgagggtcttcatgcgcggctggcgttctcctcattcatgaaa
tgggcgctcgatgcgccgtcacgtgatatgctggctcgaatgaatcgcccgatcacccct
cgggcggaacatgcgatcggatag
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