Coriobacterium glomerans: Corgl_0620
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Entry
Corgl_0620 CDS
T01453
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cgo
Coriobacterium glomerans
Pathway
cgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Corgl_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgo03019
]
Corgl_0620
Enzymes [BR:
cgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Corgl_0620
Messenger RNA biogenesis [BR:
cgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Corgl_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB06734
UniProt:
F2NBJ8
LinkDB
All DBs
Position
740326..742182
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AA seq
618 aa
AA seq
DB search
MHEIEHEGPLDPTEIAEEVDAAMVEQACADEMIASPQTSEALGVDGAEDAAPGKKEPGFE
DLGLPDIILKAVRGLHYTTPTPVQAASIPSVLAKRDILAAAQTGTGKTAAFLLPAMSNLG
HVVHQGRSRRSAEGRGPKMLIITPTRELAQQIDSVCTQIATRTKHIAVTVVGGVGYNPQK
SALRRGCDILVATPGRLIDLIDQGVCNLSEVEILVIDEADRMLDMGFLPSVKQIVALTPP
ERQTLLFSATLDEKTLGSIRDLVRDPVRVEIAAATSTADTVDQFVLPVSFDSKNDVLVEV
LKREGASRVIVFMRTKHRADSCCRRLTHAGISAAAIHGDRSQAQRERALKAFRDGRSDVL
VATDVIARGIDISDVRYVVNFDVPGEPIDYIHRIGRTGRAGEVGWALTFVTRQDIDEFYD
IESLMGKTAEIYDAQGIDVGGNAPVIDPERVPLARGGRRRTKRSRSRSGAKTQRSRRGSS
EESRPRRRSESAGKAASVGEHRESAQPRPSRPKRPGRARVRSGAADGDAAARSSRSDRSP
RSDRSRTRREGARGGDAGRSRRAERPSRDHDWRNRDLPEERTRRGGRSGGGGRTDTGGSP
RGRSGGASRRPGDGGGRR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaattgaacacgaaggtcccctcgatccgacggagatcgccgaagaggtcgat
gccgcgatggtcgagcaagcttgtgccgacgagatgatcgcctcgccgcagacgagcgaa
gcgctcggcgtcgatggagccgaggacgctgcaccgggaaagaaggagccgggttttgaa
gacctgggtcttcccgacatcattctgaaggctgttcgcggccttcactacacgacgccc
acccccgtgcaggccgcctcgattccaagcgtgctggccaaacgggatatactggcggcg
gcccagaccggaacgggcaagacggcggcgtttctgctgcctgcgatgagcaatctcggc
catgtggtccaccagggccgcagccgcagatcggctgaggggcggggccccaagatgctc
atcatcaccccgacacgcgagctcgcccagcagatcgacagcgtgtgcacccagatcgcg
acccgtaccaagcacatcgccgtgaccgtggtggggggtgttggttacaatccgcagaag
agcgcgctgcgccgtggttgcgatatcttggttgccacacccggtcgcctgatcgatctc
atcgaccagggtgtctgcaatctcagcgaagtcgagattctcgtcatagacgaggctgat
cgcatgcttgacatgggatttcttccttcggtcaaacagatcgttgctctcactccgcct
gagcgacagacgcttttgttctctgccaccttggatgagaagacgttgggatcgatcagg
gatctggtccgcgaccctgtgcgcgtcgagatcgcggctgccacctcgaccgctgacacg
gtggaccagttcgtcttgccggtctcattcgactctaaaaacgacgtgctcgtcgaggtg
ctcaagcgcgagggcgcgagccgcgtcatcgtgttcatgcgcaccaagcaccgagctgat
tcctgctgccgccgcctgacccatgcggggatctcggctgccgccatccacggcgatcga
tctcaggcacagcgggagcgcgcgctcaaggcgtttcgagacggccgaagcgacgtgctg
gtggcaaccgatgtcatcgcgcgcggcatcgacataagcgacgtccgctacgtcgttaac
ttcgacgttcccggcgagcccatcgattacatccaccgcatcggccgcaccggccgcgcc
ggcgaggtcggctgggcgctcacgttcgtgacccgccaagacatcgatgagttttacgac
atcgagtccctgatgggcaagactgcggagatctacgatgcgcaagggatcgacgtggga
ggcaatgcccccgtgatcgaccctgagcgcgttccgctcgctcgcgggggcaggcgccgc
acgaaacggagcagatcgcgctcaggcgcaaagacgcagagaagcagacgcggatccagc
gaggaatctcggccgcgccgccgctcggagtcggctggcaaagccgcttcggtgggagag
catcgcgagtccgctcaaccgagaccatctcgcccgaagcggccgggcagggcgcgagtg
cgatcaggtgctgctgatggcgacgccgcggcccgcagcagccgttccgatcgctcgccg
cgttccgatcgctcgcgcactcgtcgcgagggcgctcgcggtggcgatgccggccggtcc
aggcgagcagagcggccttcgcgcgatcatgattggcgcaatcgcgatctgcccgaggag
cgcacgcgacgcggtggccgttctggcggcggggggcgcacggataccggcggctcccca
cgcgggcgatcgggcggcgcgagtcgtcgtcccggtgacggcggcggaaggcgctag
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