Coriobacterium glomerans: Corgl_1507
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Entry
Corgl_1507 CDS
T01453
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cgo
Coriobacterium glomerans
Pathway
cgo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Corgl_1507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgo03400
]
Corgl_1507
Enzymes [BR:
cgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Corgl_1507
DNA repair and recombination proteins [BR:
cgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Corgl_1507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
CarD_TRCF_RID
Helicase_C
TRCF
ResIII
AAA_22
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AEB07606
UniProt:
F2N906
LinkDB
All DBs
Position
complement(1761995..1765558)
Genome browser
AA seq
1187 aa
AA seq
DB search
MLIHRIAAQLLSAEPIRLIEAALERGEDATLAVSQSARNLLIAAQFARRPRPTVYIVSGE
EAADRAARALTAFVGLEHVVRYPERADWPWAATAADDAAVATRCEALGRMARGDAAIMVA
SARSLLRCVPEPESRYWEEKRFAVGDQFPFEQVPTLLVGMGYARAGAADVAGTFRVHGDA
VDIFPAQSGSPVRIEFFGDEIDRIRLMVALTGQTIGEVQEVSIFPCRELALTDDAVRRLH
AALYEASQGDSELASLLEQVKARIAVPELDRLLPLMYDRTVSPLEHVPPEALIALSEPRS
LFDDCTRAYETIAQRAQDCGVRRLDGLYVRPKELDFGRQQRVNYVSLIRAGGGPTAELKI
EQPSIAGTDTRFITRLRQLVARRDAIVFAIPDRGAREAIELSLNDESIPIEESLSAAPEN
ADPIDVACLRRAADPINARRIEADAAAPTARTLTRGRVTFVDIPLTAGVVVPDAHLAVLS
LSDLSARMDRRRGRARRRAHVTDITFPYQPGDYVVHATHGIGRFASIVRQEVGGLERDYF
LLEYADGDKLYVPLEQVDRITRYVGPDGSSPRLTRLNTADWSRATVRARNSAKRLAFDLV
DLYTRRSTVAGHAFAPDTPAQLEMEQAFPYEPTRDQIEAIGDIKADMEAPKPMDRLLCGD
VGFGKTEVALRAAFKCVDNGYQVMVLCPTTILAQQHYETLFERFAPFDIEVEVLSRFRTP
SELSAALAGFSDGSVDVLVGTHRLLSSDVNPHSLGLVIIDEEQRFGVQHKEQLKNLREQI
DVLTLSATPIPRTMQMAMSGVRDMSLITTPPCGRRPVTVHVGEYDPDTVSAAIRFELARE
GQVYYVSNRVKTIEDAIDRVHEAAPEARVGVAHGKMSSREVEETMIDFTAHRIDVLVATT
IIESGIDNPHTNTLIIEDAQRLGLAQLYQLKGRVGRSASQAFAYFMFPGEQPLTQEATER
LCALSEFQELGSGMRIAMRDLEIRGAGSLVGAEQHGNLSNVGFDLFTQMLGQAVAEARGE
GASEMSESGVTINLPADFFLDEAYLRDVDRRVLLYRKLAAAADLRTVDEAQQECEADNGE
LPLAGRNLFDRARLRIRADRLGLESVSLAAGRLTFTGIDVRAPIAAALRERLGAIVYPKS
RKLSVPYRIGAGAGSGRGRGIDAHDQPSAVAAALEIASQLGTTADED
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctcattcaccgcatcgccgcccagctcttgtctgccgagccgattcgtctcatcgag
gccgctctcgagcgcggcgaggatgcgacgctcgccgtatcgcaatcagctcgcaacctg
ctcatcgcagcccagttcgcgcgcaggccccgcccgacggtctacatcgtctccggagag
gaggccgctgatcgcgccgcccgagcgctcaccgccttcgtcggcctcgaacacgtcgtt
cgctatccggagcgcgccgactggccttgggccgccacggcagccgatgacgcggctgtc
gcgacccggtgcgaggctctgggccgcatggcgcgcggcgacgctgccatcatggtcgcg
tcggcacggtctctgctcaggtgcgtcccagagcccgagagccgatactgggaagagaag
cgcttcgccgttggcgaccagttccccttcgagcaggtacccacgttgctcgtcggcatg
ggctatgcgcgagcaggcgcagccgatgtcgcgggcacgtttcgcgtccacggcgacgcg
gtggacatctttcccgcgcagtccggctctccggtgcgcatcgagttcttcggcgatgag
atcgaccgtatccgtctcatggtcgcgctcaccggtcagactatcggcgaggtgcaggag
gtgtccatcttcccgtgtcgcgagctcgctctgacagatgatgccgtacggcgcctccat
gcggcgctctatgaggcatcgcagggcgacagcgaactcgcttcactgctcgagcaggtg
aaagctcgtatcgcggttcccgaactcgatcgtttgctgccgctcatgtatgaccgcacg
gtcagcccgctcgaacacgtccctcctgaggcgctcatcgcgctatccgagccgcgctcg
ctgttcgacgactgcacgcgcgcctacgagacgatcgcgcagcgggcgcaggattgcggc
gtgcgccggctcgatgggctctacgtgcgcccgaaggagcttgatttcggcaggcagcag
cgggtgaactacgtgtcgctcatccgtgcgggaggcgggcccaccgccgagctcaagatc
gagcagccctcgatcgccggcaccgatacccgcttcatcacgcgcctgaggcagctcgtg
gcgcgccgcgacgcgatagtcttcgcgattcccgatcggggtgcccgcgaagcgatcgag
ctttccttgaatgacgagtcgatccctatcgaggagtccctcagcgcggctccggagaac
gctgatccgatcgatgtagcgtgcttgcggcgcgccgcggacccgatcaacgcccgacgc
atcgaggcggacgcggctgcgcccaccgctcggacgctgacacggggacgcgtcaccttc
gtcgacatcccgctgaccgctggcgtcgtcgtgcccgatgcgcatctcgcggtgctctcg
ctgtcggatctgagcgcgcgcatggacagacgccgcggccgcgcgcgtcgtcgcgcacat
gtgactgatatcacctttccctatcagccgggagactacgtcgtgcacgccactcacggc
atcggtcggttcgcgagcatcgttcgtcaggaggtcggcggactcgaacgcgactacttc
ctgctcgagtacgccgacggcgacaagctctacgttccgctcgaacaggtcgatcggatc
acccgttacgtgggtccggacgggtcatctcccagactcacgcgtctgaacacggctgac
tggtcgcgtgccacggtccgcgcgcgcaacagcgcaaagcggctcgctttcgatctcgtc
gatctctacacgcgtcgctcgactgtggccgggcacgccttcgctccggatacgcccgcg
cagctcgagatggagcaggcctttccctatgaacccacgcgcgaccaaatcgaggcgatc
ggcgacatcaaagctgacatggaggcccccaagccgatggatcgcctcctgtgcggcgac
gtcggcttcggcaagaccgaggtcgcgctgcgcgcggcattcaagtgcgtggacaacggc
tatcaggtcatggtgctgtgccccacgaccattctcgcccagcagcattacgagaccctt
ttcgagcgcttcgcccctttcgatatcgaggtcgaggtgctcagtcgcttccgcacgccc
tccgagctgagcgccgcgctcgcgggcttctcggacggcagcgtggacgttctggtggga
acgcaccgactgctctcctccgatgtcaatccgcacagcctcgggctcgtcatcatcgat
gaggaacagcgcttcggcgtgcagcacaaagagcagctcaagaaccttcgcgagcagatc
gacgtgcttacgctgtccgcgacgccgattccgcgcaccatgcagatggcgatgtcgggg
gtgcgcgacatgtcgctcatcacgacgccgccgtgcgggcggcggcccgttacggtgcat
gtgggggagtacgatccggataccgtctccgcggcgatccgtttcgagttggcgcgcgaa
gggcaggtatactacgtgtcgaaccgcgtgaagacgatcgaggatgcgatcgatcgggtg
cacgaggccgcgccggaggctcgcgtgggcgtcgcgcacggcaagatgagctcacgagag
gtcgaggagacgatgatcgacttcacggcccatcgcatcgacgtgctcgttgcgacgacc
atcatcgagagcggcatcgacaatcctcacacgaacaccctcatcatcgaggacgcgcag
cgattgggcctcgcccagctctaccagttaaagggcagagtcggccggtccgcctcgcag
gccttcgcctacttcatgttccccggcgagcagccgctcactcaggaggcgaccgagcgg
ctgtgcgcgctgtccgagttccaggagctgggcagcggcatgcgcatcgcgatgcgcgat
ctcgagatcaggggggccggctcgcttgtcggagccgaacagcacggcaacctgtcgaat
gtgggattcgatctgttcactcagatgctcgggcaggctgttgccgaggcgcgcggcgag
ggggcgtccgagatgagcgagtccggagtgacgatcaatctgccggcggatttctttttg
gatgaggcctatctgcgcgacgtggaccgccgcgtgctgctctatcgcaagctcgctgca
gcagcggatctgcgtacggttgacgaggcgcaacaggaatgcgaggcggataacggcgag
ctgccgcttgcgggcagaaatctgttcgaccgcgcccggctgcgcatccgggcggaccgg
ctgggtcttgagagcgtctcgctcgcggcgggcaggctcacgttcaccggcatagatgtg
cgcgccccgatcgccgccgccttgcgagagcggttgggagcgatcgtctatccgaagtcg
cgcaagctctcggtgccctaccgaatcggggccggagcgggctccgggcggggtcgagga
atcgatgctcacgaccagcccagcgccgtcgcggccgcactcgagatcgcaagccagctc
ggcaccaccgcagacgaggactga
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integrated database retrieval system
