Cottoperca gobio: 115003465
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Entry
115003465 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgob00535
]
115003465
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115003465
04091 Lectins [BR:
cgob04091
]
115003465
Proteoglycans [BR:
cgob00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
115003465
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115003465
Lectins [BR:
cgob04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
115003465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
YabA
EGF_3
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
115003465
NCBI-ProteinID:
XP_029281119
UniProt:
A0A6J2P6S2
LinkDB
All DBs
Position
3:complement(7578077..7591141)
Genome browser
AA seq
1542 aa
AA seq
DB search
TDPEDVLSVSIPLEEPQRPLLGATLVLPCYFEDHTVPDPGAPTIAPLAHRIKWSLVTKEK
VTTILVALEGQVRISESYMDRVHLVGYPMTSTDASIKISELRSSDTGVYRCEVQHGIEDN
HDIVHVQVQGLVFHYRAIIGRYSLTFEKAKAVCTQNSAVMASPEQLQAVYDDGFHQCDAG
WLSDQTVRYPIHDPRVNCYGDKEELPGVRTYGVRDLNETYDVYCFTQKMTGRVFYTASAE
KFTFSEAVVACSNQGAELATTGQLYLAWQGGMDVCNAGWLGDRSVRYPINIRRPQCGGGL
LGVRTVYLHTNQTGYPHPESRYDAFCYTESPDEEGSGIIEEGSGVLSVTTVTGSPEVFFR
RTTTESEAIGEVDTQQPTIVDFTYTESPTELPLPPPPNVTELIIDLIEPATARPDTRREP
SKGFVTPPTGVVFHYRSGSDRYAFTFVEAQLACQSVGAYIATPKQLQAAYEAGYHQCDAG
WLLDQTVRYPIVFPRDKCAGDLGDQPGVRSYGLRPADEKYDVYCNIDGLKGEVFHVGSAE
GLTYDEAASRCQEQNAVLASTGELYAAWKMGFDKCRAGWLVDHSARYPINKPRIGCGAGK
SGVHTVYTHPNQTGFPELEARFDAYCFRADILLIANETGLNITDIQEALLNLTSITDLLR
PAVPSIVSPIPVETSGSGSGSADFGSGSAVDGASGGHSGDLSGSGDLSGSGHQVTSEDKS
GSGDLSGSGDLSGSGDQVTSEDKSGSGDLSGSGDQVTSEDKSGSGDLSGSGDQVTSEDKS
GSGDFSGSGDQVTSGHQSGSGDLSGSGDQVTSGHQSGSGDLSGSGDQVTSVDKSGSGDFS
GSGDQVTSGHQSGSGDFTGSGDFTGSGDMAGSASADLPSGLGFTSADASGSAHSGEGFSI
NVVFSGIDSIVSGEGSALGGLQEAGEGSTGIFIFPSSEAGSGVLSGSGDLSGSGSGFSSA
ESGSSIDISGENGQFSGMSSGFITDNDFSGFNGFPSGFSSGSASGQSGQLSGSGNTQILL
IDGKLLDASTPITHKEYELGGGLLAFSGSGDISGSGILSGDLSGSDSGSGSGFFSGVTFV
GSGFTDLTVSSSREQEASGFLLYSSGQGSGGHLSGFGSSSFIAGSGSGMSGSESSTSEVS
GDNTLSIELGQGSVEYSGEVSSSGSGFYSGSGDNQFTTASGSSSGAFSGDLPQLVLPSPS
SEWALTESTKGPQEALSGVELSQTPVTDIFGTPHPVLAPAGLAAPPTTASPASVQTPGIV
KETDSVEGFNPCEPNPCGTTSCTVEDRVALCHEVDVCHPNPCTNGATCVESADSYKCLCL
PSYGGERCEIDEQQCEDGWTKFQGNCYLHFSDRETWLDAEQHCRDMNAHLVSIITPEEQD
FVNSNAQDYQWIGLNDKTVENDFRWTDSTPLQYENWRPNQPDNYFNSGEDCVVMIWHENG
QWNDVPCNYHLPFTCKKGPVSCGAPPEVENARMFGNKREEYPFNSIIRYQCSPGFLQRHP
PVVRCKADGQWEKPQVECTDVKARKRIQRRSSRSLTAGGKLH
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
acagacccggaggatgtgctgagtgtgagcattcctctggaggagccacagcgtcctcta
ctgggagcaacgttggtactaccgtgttactttgaggaccacactgtcccagacccagga
gctcccaccatcgctcccctcgctcatcgcatcaaatggagccttgtcaccaaagaaaag
gtcacgactatactggtggccttggaaggtcaggtgcgtatcagcgagagctacatggat
agagttcatctggtgggctaccccatgacttctacagatgctagcatcaagatatctgag
ctgcggtccagtgacacaggagtctaccgctgtgaggttcagcacggcatcgaggacaac
cacgacatcgtccatgtgcaggttcaaggtttggtgttccactaccgagcaatcataggc
cgctacagtttgacttttgaaaaggcgaaggcagtatgcacccagaacagtgcggtcatg
gcttcacctgaacagcttcaagcagtctacgatgatggattccaccagtgtgacgctggc
tggctctctgaccagacagtcaggtacccgatccatgatcctcgtgtgaactgctatggc
gacaaagaggagctgcctggggtcaggacatacggagtgagagacctcaatgagacttat
gatgtctactgcttcactcagaagatgacaggcagagttttctacaccgcttctgcagaa
aagttcaccttctctgaggctgtggttgcatgctccaatcagggagctgagttggccact
actggacagctctacttggcttggcagggtgggatggatgtctgtaacgccggctggctg
ggagacaggagcgtccgctaccccatcaatatccgtcggccacagtgtggagggggtctg
ctgggggtgcgaactgtttaccttcacacaaaccagacaggatacccacatcctgagtct
cgctacgacgccttctgctacacagagtcccctgatgaggaaggttcaggcatcatagaa
gagggaagtggcgtgctgagtgttaccacggtgacagggagcccagaggtgttctttagg
aggacaactacagagagcgaggcaatcggagaggtggatactcagcagcctaccatagtg
gacttcacctacacagagagccctaccgagctgccactgcctccgccgccaaacgtcact
gagttgatcattgacctgatagagccagccaccgcccggcccgacacacgcagggagcca
agcaaaggctttgtgacgcctccaactggtgtggtgttccattatcggtcaggctccgac
cgctatgctttcacattcgttgaggcccagctggcctgccagagtgtcggagcctacatt
gccacgccaaagcagctgcaggcagcatatgaggctggatatcaccagtgtgatgcagga
tggttactggatcagactgtaaggtatcccattgtttttcctcgagataagtgtgctgga
gatctgggggatcaacctggagttcggtcatatggtttgaggccagcagacgagaaatat
gatgtatactgtaacattgatggactgaaaggtgaggttttccatgtgggctccgctgag
ggtctcacctatgatgaggctgcttctcgctgtcaagagcagaacgctgtattggcctcc
accggagagctgtacgcagcctggaaaatgggtttcgacaagtgccgagctggctggcta
gttgatcatagcgcccgctatccaattaacaaaccccgtattggatgtggagctgggaaa
tcaggagtacacacagtgtacacgcaccccaaccagacaggcttccctgaacttgaagcc
agatttgatgcatactgtttcagagcggatattctacttattgcaaatgaaactggactg
aatatcacagatatccaagaggcccttcttaacctaacatcaattactgatttgttgagg
cctgctgttccttccatcgtctctcctatccctgtggagacttcaggctctggctctggc
tcagcagactttggctcagggtctgcggttgatggtgcctctgggggtcactctggagat
ctgtctggatctggagatctgtctggttctggacatcaagtcacctctgaagataaatct
ggttctggagatttgtctggttctggagacttgtctggttccggagatcaggtcacttct
gaagataaatctggttctggagacttgtctggttccggagatcaggtcacctctgaagat
aaatctggttctggagacttgtctggttccggagatcaggtcacctctgaagataaatct
ggttctggagacttttctggttccggagatcaggtcacctctggacatcaatctggttct
ggagacttgtctggttccggagatcaggtcacctctggacatcaatctggttctggagac
ttgtctggttccggagatcaggtcacctctgtagataaatctggttctggagacttttct
ggttccggagatcaggtcacctctggacatcaatctggttctggagactttactggttct
ggagactttactggttctggagacatggcaggcagtgccagtgctgatctgcccagtgga
ttgggtttcaccagtgcagatgcatctggatcagcacacagtggagaaggattcagcatc
aatgttgttttttcaggcattgacagcattgtctctggagagggctcagctttaggagga
ctccaagaagctggagagggaagcacaggaatctttatcttcccttcatctgaagcaggc
tctggagtgctaagtggtagcggggacctgtctggatctggatctggtttcagctctgcg
gagagtggctcttcaatagacatctctggagaaaatggacaattctctggcatgtcgtcc
ggtttcatcacggacaatgacttttctgggttcaatggtttcccctcaggattctcctct
ggaagtgctagtggacagtcgggacagctttcgggaagtggaaacacacagatcttactg
atagatggtaaactgctcgatgcatccaccccaattacccacaaggagtatgagcttggt
ggaggcctactggcattcagtggctctggagacatttcaggatctgggatcctcagtggc
gatctcagtggctcggactctggaagtggctctggcttcttctcaggcgtgacctttgtg
gggtcaggtttcactgaccttacagtgtcatcctctagggagcaagaggcctctgggttt
ttactctatagctccggacagggaagtggtggacatttgtctggatttggaagctcaagt
ttcatcgctgggtctggatcgggaatgtctggatctgagtcgtcaacgagcgaggtatcc
ggagacaatacactgtctatagagcttggacaggggtcagtggagtacagcggagaagta
agtagtagtggaagtggcttctactctggcagcggtgacaaccaattcaccacggccagt
ggctcttcttccggagctttctctggagatctgccacagctcgtgctgccctctccatcc
agtgagtgggctctgacagagagcaccaaagggccacaggaggcccttagcggggttgaa
ctgtcacagacccctgtcacagacatctttggaactccccaccctgtgcttgcccccgca
ggactggctgcacctcccaccacagcttcaccagcctctgtgcagacaccaggcattgtt
aaagaaactgattcagtggagggttttaacccatgtgagcccaacccctgtggtactact
tcatgcacagtagaggatcgggttgctctctgccatgaggtagatgtgtgccatcccaac
ccttgtaccaatggagccacctgtgtggagagtgcagactcttacaaatgcttatgcctg
cccagctacggaggggaacgctgtgagatcgatgagcagcagtgtgaagacggttggact
aagtttcaggggaactgctacctgcacttctctgacagagagacgtggttggacgcagag
cagcactgccgggacatgaacgcccacctggtcagcatcatcaccccagaggagcaggac
tttgtcaattcaaacgcacaggactaccagtggatcggactcaacgacaagacagtagag
aatgatttccgctggacagatagcactccactgcaatacgagaactggaggccgaaccag
ccagataattacttcaactctggagaagactgtgtggtgatgatctggcatgagaacggc
cagtggaacgacgtgccctgcaactaccacctgccgtttacctgcaagaaaggccccgtg
tcctgtggcgccccgccggaggtggagaatgctcgcatgtttggtaacaagagggaggaa
taccccttcaactccatcatccggtatcagtgcagcccagggttcttgcagcgccatcct
ccggtggttcgctgtaaggcagacggacagtgggagaaaccccaagtggaatgtactgat
gtgaaagccagaaaaagaatacagcggaggagcagcaggagtctgacagccggcggcaag
cttcactaa
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