Cottoperca gobio: 115003576
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Entry
115003576 CDS
T07513
Symbol
cstf3
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
cgob
Cottoperca gobio
Pathway
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115003576 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115003576 (cstf3)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115003576 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
115003576
NCBI-ProteinID:
XP_029281288
Ensembl:
ENSCGOG00000021343
UniProt:
A0A6J2P5W2
LinkDB
All DBs
Position
3:22742490..22753717
Genome browser
AA seq
720 aa
AA seq
DB search
MSTEGAADQVAPEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPTYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYXRSERPSRMK
YEKVHGIYNKLLTIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTA
ALMEYYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGS
LSPEKSGEIWARFLGFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYP
CSGSELKALGYKDVSRAKLTTLLPETVVTPSTPALKDDADRKPEYPKPDTNQMIPFQPRH
LAPPGLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDEIMETFRRCTLPETVDAAV
ELITGRQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagggagccgccgaccaggtagcaccagagtatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgacttgtcaca
cagttcccaagttctggcagattctggaaactattcattgaagcagagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtattgcacatcgac
ctgtggaaatgttacctctcatatgttcgagagaccaaaggaaagctgcccacctacaaa
gagaagatggcgcaggcgtatgacttcgccctggataaaattggcatggaaattatgtca
tatcagatttgggtggactacattaacttcctcaaaggagtggaggccgtgggctcatac
gcagagaaccagcgaatcaccgcagtgcggcgggtgtaccagaggggctgcgttaacccc
atgatcaacattgagcagctctggagagattatagcaaatatgaggagggaatcaatgta
cacttggccaaaaagatgattgaggaccgaagtagggactacatgaatgccaggagagtg
gcaaaggagtatgagactgtgatgaaggggttggacaggaatgcaccctcagtaccgcca
cagaactcccctcaggaagcccagcaagtggacatgtggaagaagtacatccagtgggaa
aaaagcaacccgctgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggtgctgggccaccatcctgacgtatggtatgaggcagcacag
tacctggagcagtccagtaaactgctggcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcagctaacatctatgaacgtgccatcgggactcttctgaagaagaac
atgctgctgtacttttcattcgccgactactgaagaagtgagcgtccaagtcgcatgaag
tacgagaaggtccacggcatctataacaaactgctgaccattgaggacatcgaccccacg
ctggtctacatacagtacatgaagtttgccaggagggccgaggggatcaagtcgggtcgc
accatcttcaaaaaggcccgagaggatctacgcacgcgacaccacgtgtatgtgacggca
gctctgatggagtactactgcagcaaggataaatcggtggccttcaagatttttgagctt
ggtttgaaaaaatacggtgacattccagagtacatactggcatacattgattacctctca
catcttaatgaggacaacaacaccagggttctgtttgaacgtgtcctcacctcaggaagc
ttgtcaccagagaagtcaggtgagatctgggctcggtttttgggttttgagagcaacata
ggagacctggccagtatcctgaaagtggagcgcaggcgattcactgcctttaaggacgag
tacgagggcaaagaaacagccttgcttgtagatagatacaagttcatggacctgtatcca
tgctccggtagtgaactcaaggcccttggatacaaggatgtgtctcgtgccaaactgaca
acactgctcccggagaccgtggtgacgccctctacgccggcactaaaggatgacgccgac
cgtaaacccgagtaccccaaacctgacaccaatcagatgatccccttccagccacgtcac
ctcgcccctccaggtttacaccctgtccctggtggagttttcccagtccccccagctgct
gttgtcctaatgaagctgctccctccgcctacgtgcttcactggaccctttgttcaagtg
gatgagatcatggaaacattcaggagatgcacacttcctgagactgttgatgctgctgta
gagctgatcaccggtagacagcccgatgcaggaggggagggcaacggctccatggagaat
catgctgttgccaagtcactcaagaggcctaacgcagactccgacgaggaggatgacaaa
ggagctgtggctccgcccatacacgacatctaccgtgcacgccaacagaagaggattcga
taa
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