KEGG   Cottoperca gobio: 115004818
Entry
115004818         CDS       T07513                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cgob  Cottoperca gobio
Pathway
cgob03030  DNA replication
cgob03410  Base excision repair
cgob03420  Nucleotide excision repair
cgob03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115004818 (rfc2)
   03410 Base excision repair
    115004818 (rfc2)
   03420 Nucleotide excision repair
    115004818 (rfc2)
   03430 Mismatch repair
    115004818 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgob03032]
    115004818 (rfc2)
   03036 Chromosome and associated proteins [BR:cgob03036]
    115004818 (rfc2)
   03400 DNA repair and recombination proteins [BR:cgob03400]
    115004818 (rfc2)
DNA replication proteins [BR:cgob03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115004818 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    115004818 (rfc2)
Chromosome and associated proteins [BR:cgob03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115004818 (rfc2)
DNA repair and recombination proteins [BR:cgob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115004818 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    115004818 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Viral_helicase1 AAA_assoc_2 AAA_11 AAA_24 Rad17 Mg_chelatase MipZ AAA_19 DEAD nSTAND3 RuvB_N AAA_18 AAA_5 AAA_30 DNAX_ATPase_lid ABC_tran RNA_helicase MeaB AAA_28 AAA_25 SLFN-g3_helicase NTPase_1 AAA_23 AAA_2 MCM
Other DBs
NCBI-GeneID: 115004818
NCBI-ProteinID: XP_029282374
Ensembl: ENSCGOG00000016870
UniProt: A0A6J2PAI6
LinkDB
Position
Unknown
AA seq 386 aa
MRRQFTVAWLPGREKFRCCSRADMTDGSKLIMDVEMVEAEQKPTESGQKVDTGAGEASTK
SSGVTYELPWVEKYRPVKLNEIVGNVETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILC
LARALLGASMKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPKGRHKVIILDEADSMTD
GAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLTDGQILARLQEVVEK
ERLSVSDDGLEAIIFTAQGDMRQALNNLQSTNSGFGYINSENVFKVCDEPHPLLVKSMLG
HCVDGDIDKAYKVVEQLWALGYSPEDIIGNIFRVCKTCQMPEYLKLEFIKEIGYTHMRVS
EGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaggcgtcagtttactgtcgcgtggttgccagggagggaaaagttccgctgctgttcg
cgggctgacatgacagacggcagtaaactcatcatggacgtagagatggtggaggctgag
caaaagccgacagagagcgggcagaaggtggacactggagccggggaagcttcgactaaa
agctccggcgtcacctacgagctgccctgggtggagaaataccgtccggtgaagttgaac
gagatcgtggggaacgtggagacggtgagccggctggaagtgttcgccagagagggaaac
gtccccaacatcatcatcgcaggtcctcccggcacaggaaagaccaccagcatcttgtgt
ttggcccgagctctgctgggagcctccatgaaagacgccgtgctggagctcaatgcctca
aacgaaaggggaatcgacgtggtgaggaacaagatcaagatgtttgctcagcagaaagtc
acactacccaaaggacgacacaaggtcatcatcctggacgaagcagacagcatgacagac
ggagctcagcaggcgttgaggaggatcatggagatctactcaaagacgacacgcttcgct
ctcgcctgtaacgcctcggataagatcatcgagccgatccagtctcgctgcgcggtgctg
cgttactccaaactgaccgacggacagatcctggcgcggctgcaggaagtggtggagaag
gagcgtctgtcggtgtctgacgacgggctagaggccatcatcttcaccgcccagggagac
atgagacaggccttgaacaacctgcagtccacgaactccggcttcggctacatcaacagt
gagaacgtcttcaaagtgtgcgacgagcctcaccctctgctggtgaaaagcatgctggga
cactgtgtggacggggacatcgacaaggcctacaaggtggtggagcagctgtgggcgctg
ggctactctccagaggacatcatcggaaacatcttcagggtctgcaagacgtgccagatg
cccgagtacctcaaactggagttcatcaaggagatcggctacactcacatgagggtgtct
gaaggtgtgaactccctgctgcagatggccggtctgctgggtcgactctgcagcaagacg
gcgccccctgctgccagctga

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