Cottoperca gobio: 115004930
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Entry
115004930 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SHPRH-like
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115004930
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115004930
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115004930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_5
TPR_10
DUF684
SelB-wing_2
Motif
Other DBs
NCBI-GeneID:
115004930
NCBI-ProteinID:
XP_029282541
UniProt:
A0A6J2PB56
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MSSRRKRAPPVRVDEDSKKKLNWNMLDDRRMEEQEETPTCSILPVQPPPCTDSVSPLEQD
VPEASCCFTEEPPGTSSDSTSASLALTVLPALTPAHSWGALIGEFSVCPSWMPSDCERRA
LVLHRVGEQLCLGYSGTEESSGLQXGPDQDTCTAECSLAGILLEELDWMQKRRVLQLRHQ
QDGSAVKVGVYVLQTGLGKPELLSEGSARMKKANQLMQKLMEYFYDFIIPEVVESGEEEC
DTDLERQNVEELYDYVRHLHQRERREETCDLQHEALVPVLRPYQSQAVNWMLQREKCRKS
STPEQSLHFLWRELITLCGKKLFYNPFTGCLVAEFPPAGVAWPGGILADEMGLGKTVEVL
ALILFHSRQDLQQETLCLPEGKSVNYFVPLPPLETQEVIQLKCEAQPRGRTSNPAVRVML
LTAIKEMRSGKGASVNAVFTYIRATYGYDLLRNRGHTKKTLVKLIDEGLVDRVKGRGLAG
SFKLGKKYKETKKTSAAASTANSRNTESTPRKMFQRRAKDKAEAALNICLRDEQRDEQRD
GQRDEQRDGQRDGDEQKEGQRDEQRDGQNSAAPGRAAPEETDTKKESEDQAEDKPTLPAA
PQLDPLPPRASSVPFSSPDFHFECICGELGLVDYKARVQCMKCELWQHAACVNYREESVE
TTPFYCPHCLVAMKPVCTGATLIISPSSICHQWVEEINRHIRCSSLRVLVYQGVKKHGFM
QPHMLAEQDVVITTYDVLRSELNYVDIPHSNSRDGRRFRNQKRYMAVPSPLVAVEWWRVC
LDEAQMVECPTAKAAEMALRLPSVNRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWL
QLLYRPYRRGNTEPLYNVIAALLWRSAKKDVIDQIQIPPQTEEVHWLHFSPVEGHFYHRQ
HDVCSQDALVKLRKISDWSLKLGSLDRRTVHTILGPLLRLRQACCHPQAVRGEFLPLQKS
TMTMEELLKSLQKKCRVECEEAHRQLVCAFNGLAGLHIIRGQFGDATEMYREVLRSSEEH
KGRLKTDSLQRLHATHNLMELLSAKHPGIPPTLRDDRLSEEAEQLRQHYMTKYDSEVADA
LQALQPVLQNIKELKRKVKLNAPWWLDVIERSIRSSSADELVSRIKNELTSSYKQQANKL
SMADKFRDACGLKFILSTQMKDLMKAQKTVQDAVRSLEGPASKKVIDEVTICHLRPTRLP
LNNCVFCKADALFIDYESKLFSHTVKGQTAIFEEMIEDEDGLMDDRLPTTSRGLWAASET
ERSLKAVLAFARVKRMEAELLEEGTTFMELFENWKKEYKVLHEYWMVLRNHVSAIDELGM
ATERLRVRLPDEAKPKLLHIIEPHEVEQNRVKLLNDQAVAKSQLQKKLGQFLYLTNLEKS
QDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAIIVEQYSVGSRRRAIMCAICR
QTTSHAEISYVFTTVSSDQDQDVPVQGSHSTKVEAVVRTLKKIQMSDPGAKCLVFSTWLC
VLDIISKALFDNNMEFSQINGIHKFQENLCSFKYEEKINILLLPLHTGSNGLNIIEATHV
LLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERMQAMMKTAEKSHSSTMKH
SEAAVLTVADLADLFTEDTEHLESM
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgcagaaagagggccccccccgtgagggtggacgaggactccaagaagaag
ctgaactggaacatgctggacgaccgcaggatggaggagcaggaggagacccccacctgc
tccatcctgcctgtccagcctcctccctgcacagactctgtctcccccctcgagcaggac
gtcccggaggcttcctgctgcttcacagaggagccccccggcacgtcgtcagacagcacg
tctgcctcactcgccctcaccgtgctgcccgctctgacgccggcccacagctggggggcg
ctcatcggggagttcagcgtgtgtccgtcttggatgccgtccgactgcgagcggagagct
ctggtgttgcacagggtgggggagcagctctgcctcggctacagcggcactgaggagagc
tctgggctgcagngggggccggaccaggacacgtgcacagctgagtgcagcctcgctggg
atcctgctggaggagctcgactggatgcagaagaggagggtgttgcagctccgccaccag
caggacggcagtgcagtcaaggtgggggtttacgtgctgcagaccgggctggggaagccc
gagctcctcagcgagggaagcgctcggatgaagaaggccaatcagctgatgcagaagttg
atggagtatttctacgacttcattatccccgaagtcgtagagagcggggaggaggagtgc
gacaccgacctggagaggcagaacgtggaggagctctacgattacgtccgacatctgcac
cagagagagagacgcgaggaaacctgcgacctccagcacgaagcgctcgttcctgtgctc
aggccgtaccaaagccaggccgtcaactggatgctgcagagagagaagtgcaggaagagc
tccactccagaacaaagtctgcatttcctctggagggagctgatcactctgtgtggaaag
aagttgttctacaacccgttcaccggctgcctggtcgcagagttccccccggcgggcgtg
gcatggcccggggggatcctggcggatgagatgggtctggggaagacggtggaggttctg
gctctcatcctgttccacagccggcaggacctgcagcaggagacgctctgcctgccggag
ggaaagtcagtgaactactttgtccctcttcctcctctggagacgcaggaagtgatccag
ctgaagtgtgaagctcagcctcgaggcagaacctcgaacccagccgtgcgcgtcatgctg
ctcactgcgatcaaggagatgagatccggtaaaggagcctccgtcaacgccgtcttcacc
tacatccgcgccacttacggctacgacctcctgagaaaccgcggccacacgaagaagacg
ctggtgaagctgatcgacgaaggcctggtggaccgggtcaaaggtcgcggcctggccggg
tcctttaaactggggaagaagtacaaagagacgaagaagacgtcagcagcagcttccaca
gctaactccagaaacacagagagcacgcccaggaagatgttccagagacgagccaaagac
aaagcagaagcagctctgaacatctgtctgagagacgagcagagagacgagcagagagac
gggcagagagacgagcagagagacgggcagagagacggagacgagcagaaagaggggcag
agagacgagcagagagacgggcagaactctgctgcaccgggccgtgcagcgcccgaggag
acagacacgaagaaggaaagtgaggatcaggcagaagacaaaccaacactacctgcagct
cctcagctggaccccctcccccccagagcgtcctctgttcccttcagctcgccggacttc
cacttcgagtgcatctgtggggagctgggcctcgtggactacaaggctcgcgtgcagtgc
atgaagtgcgagctgtggcagcacgcggcctgtgtgaactacagggaggagagcgtggag
acgacgcccttctactgcccgcactgcctggtggccatgaagcccgtctgcaccggggcc
acgctcatcatctcccccagctccatctgccaccagtgggtggaggagatcaaccggcac
atccgctgctcctcactgcgcgtactggtgtaccagggcgtgaagaagcacggcttcatg
cagcctcacatgctcgctgagcaggacgtggtcatcaccacctacgacgtgctgcgctcg
gagctcaactacgtggacatccctcacagcaacagccgcgacggacgccgcttccgcaac
cagaagcgctacatggctgtccccagccccctagtggccgtggagtggtggcgcgtctgt
ctggacgaggcgcagatggtcgagtgtcccaccgccaaggctgcagagatggctctacgc
ctcccgtctgtgaaccgctggtgtgtgagcggcactcctgtgcagcgaggcttagaagat
ctgtatggcctcgtgcttttcctgggagtcgatccgtactgggtgaagcactggtggctg
cagctgctttatcgaccgtatcgccgaggaaacacggagccgctgtacaacgtcatcgct
gccttactgtggcggtcagcgaagaaagacgtcatcgatcagattcagattcccccccag
acagaggaggtgcactggctgcacttctcccccgtcgagggtcatttctaccaccgtcag
cacgacgtctgctcccaggacgctctggtgaagctcaggaagatctccgactggagcctg
aagctcggcagcctggaccgacgcaccgtgcacaccatcctgggcccgctgctgaggctg
cggcaggcctgctgccacccccaggctgtgaggggggagttcctgccgctgcagaaaagc
accatgacgatggaggagctcctgaaatccctgcagaagaaatgtcgagtggagtgtgaa
gaagctcacagacagttagtgtgtgcattcaacgggctggctggactccacatcatcaga
gggcagtttggagacgcaacagagatgtatagagaagtgctgcgttcatcagaggagcac
aaaggcagactgaaaactgactcattacagagacttcatgcgacccacaatttgatggaa
ctgctgagcgcaaagcatcctgggatacctcccacgctgagagacgaccgactaagtgag
gaggcggagcagctgcgtcagcactacatgactaaatacgactctgaggtcgcagacgct
cttcaggctctgcagccggttctgcagaacatcaaggagctgaaacgcaaagtgaagctg
aacgctccctggtggctggacgtcatcgagaggtcgatccgcagctccagcgccgacgag
ctggtgtcccgcatcaagaacgagctgacgtccagctacaagcagcaggccaacaagctc
agcatggcagacaagttccgtgacgcctgcggcctgaagttcatactcagcacgcagatg
aaggatctgatgaaggcccagaagacggtgcaggacgcggtgaggagcctcgaaggcccg
gcgtcaaagaaagttatcgacgaggtcaccatctgtcacctcaggcccacgaggctgccg
ctcaataattgtgttttctgcaaagccgacgcccttttcatcgactacgagtccaagctg
ttctctcacacggtgaagggtcagacggccatctttgaggaaatgatcgaagatgaagac
gggctgatggacgaccgtctgcccaccaccagcagaggtctgtgggcggccagcgagacg
gagcgctccctgaaggccgtgctggctttcgcccgagtgaagcgcatggaggcggagctg
ctggaagagggcaccaccttcatggagctgtttgagaactggaagaaggagtacaaggtg
ctgcacgagtactggatggtgctgaggaaccacgtgtcggccatcgatgagctcggcatg
gccaccgagaggctccgcgtgcgtctgcccgatgaagcgaagcccaaactgctgcacatc
atcgagccgcacgaggtggagcagaacagagtgaagcttctgaacgatcaggccgtcgcc
aagtctcagctccagaagaagctcggacagtttctgtacctgacgaacctggagaagtca
caggataaatctactggaggactgaacccagagccgtgtcccatctgtgcacgacccctg
gggcaggagtgggcagtgctgacctgtggccactgcttctgcaacgagtgcatcgccatc
attgtggagcagtacagcgtgggctccaggcggcgtgccatcatgtgtgccatctgtcgg
cagaccacgtcccacgctgagatctcctacgtgttcaccaccgtgtcgtcagaccaggac
caggacgtacctgtgcagggaagccactcgaccaaagtggaggcagtggtgagaacgctg
aagaagatccagatgagcgaccccggggccaagtgtctcgtcttctccacgtggctgtgt
gtgctggacatcatctctaaggccctgttcgacaacaacatggagttctctcaaatcaac
gggattcacaaattccaggagaacctgtgctccttcaaatacgaagaaaagatcaacatc
ctgctgcttcctctccacaccggctccaacggtctgaacatcatcgaggcgactcacgta
ttgctggtggagccgatcctgaaccctgcgcacgaactgcaggccatcggcagagtgcat
cgcatcggccagaccaagccaacttttgttcacagattcctcatcaaatccaccattgaa
gagagaatgcaggcgatgatgaagacagcagagaaaagtcacagcagcaccatgaagcac
tcggaggcggccgtgctgaccgtggccgacctggctgacctttttactgaggacacagaa
cacctggagtcaatgtga
DBGET
integrated database retrieval system
