Cottoperca gobio: 115005578
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Entry
115005578 CDS
T07513
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
cgob03015
mRNA surveillance pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115005578 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
115005578 (eif4a3)
03015 mRNA surveillance pathway
115005578 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115005578 (eif4a3)
03041 Spliceosome [BR:
cgob03041
]
115005578 (eif4a3)
03009 Ribosome biogenesis [BR:
cgob03009
]
115005578 (eif4a3)
03012 Translation factors [BR:
cgob03012
]
115005578 (eif4a3)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115005578 (eif4a3)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115005578 (eif4a3)
mRNA cycle factors
Stress granule specific factors
115005578 (eif4a3)
Spliceosome [BR:
cgob03041
]
Complex C
Other components
EJC/TREX
115005578 (eif4a3)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
90S particles
Helicases
115005578 (eif4a3)
Translation factors [BR:
cgob03012
]
Eukaryotic type
Initiation factors
eIF-4
115005578 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
115005578
NCBI-ProteinID:
XP_029283313
Ensembl:
ENSCGOG00000022767
UniProt:
A0A6J2PB43
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAAGTQGRKRIMREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgggacgcaaggcaggaagaggatcatgagggaggaggacatgaccaag
gtggagttcgagaccagcgaggaggtggacgtcacccccaccttcgacaccatgggcctc
cgggaggacctgctccgcggcatctacgcttacggttttgagaagccatcagcgatccag
cagagagccatcaaacagatcatcaaaggccgagacgtcatcgcccagtcccagtctgga
acaggaaagacggccaccttctgcgtgtcggtgctgcagtgtctcgacatccaggtgagg
gagacgcaggcgctgatcctcgctcccaccagagagctggctgggcagattcagaaggtg
ctgctggctctgggagactacatgaacgtgcagtgtcatgcctgcatcggcgggaccaac
gtaggcgaggacatccggaagctagactacggtcagcacgttgtgtcggggacgccggga
cgagtgtttgatatgattcggcgaaggagtctgaggacaagagccatcaagatgctggtt
ctagacgaagctgacgagatgctcaacaaaggctttaaggagcagatatacgatgtgtac
cgctacctgcctccagccacgcaggtggtgctgatcagcgccacgctgccgcacgagatc
ctggaaatgaccaacaagttcatgaccgacccgatccgcatcctggtcaaacgtgatgag
ttgacactggaggggataaagcagttcttcgtggcggtggagagggaggagtggaagttc
gacactctgtgtgatctgtacgacacactgaccatcacacaggcggtcatcttctgcaac
accaagaggaaggtggactggctgacagagaagatgcgagaggcgaacttcacggtgtcg
tcgatgcacggcgacatgcctcagaaggagagggagtccatcatgaaggagttcagatca
ggagccagtcgcgtgctgatctccaccgacgtttgggctcgagggttagacgttcctcaa
gtgtctctgatcatcaactacgaccttcccaacaacagagagctctacatccacaggatt
ggtcggtccgggcgttacgggcgtaaaggtgtggccatcaactttgtgaagaacgacgac
atcaggatcctgcgcgacatcgagcagtactactccacgcagatcgacgagatgcccatg
aacgtggccgatctgatctaa
DBGET
integrated database retrieval system
