Cottoperca gobio: 115005751
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Entry
115005751 CDS
T07513
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115005751
Membrane trafficking [BR:
cgob04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115005751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_M
VPS13_VAB
VPS13_C
WWE
Synapsin
Motif
Other DBs
NCBI-GeneID:
115005751
NCBI-ProteinID:
XP_029283566
UniProt:
A0A6J2PE91
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MGRYKSVAFTTPSTWQGPIKEGGETLLSNEEEEALETLKFNFNIESLGLVLYSTDPKQPS
DLQHQQNLRLGEFALHLLKTSGKILSSGSVEVTTVLSGCTLDDLRAGMERTTSRMVGRRD
EDSPEAMIDVTYRQSAAEREVVAVLQKLYLCASVEFLMAVTDFFLQALPQMPTSVQSNRL
PLRQTTEPRADGKTASTLRTRLRAVVVDPEVVFVASLMKADAPALVASFQCDFSLQAEED
GTQNMRANLRELKVLACPFIRNKEDTAVTTVLRPCSVALETRTHPNQPLSGSVTVEEVIV
KISPFILNTVMTITAAMTAKQGDEQSKESQTEVSDLWSVMNIYGCNFWFLGVDAATEVTE
SFREQDGRSEGESFTAEVKVVQVTLESGSGHRTAPLLLAESSFSGSARNWSSLLQLRADM
TLEVNYFNELQAVWEPLIELVDGGRRRWNLELEMKNSPLQDKSPVHGDDFVILPEPRTAV
SICSRDTMNITVSQCSLRVLHNLATAFSEGTGSSFDPSLKEKAPFTIRNALGIPLIVQHS
ATLRPLGSLVQGKLHELLVDQTMDLEHSMFKTSSRGKLSALQRQESCLFNLTVVPSGYSE
ISNIAVNKPGRRLYNIRGPMLQEAVSVLLQIDAADGNKVITVRSPLQIKNHFSVPFTILM
YCPSSRSLQSIGQAEPEREFHISLATYRCQLFVRPAGHLDGHYSPSSTCVAWKEQVHHSS
EVRSVLQCPAADCSLLPLMVSTLAVPDELRHIASHGEEDWDPAYIIHLHPVARLRNLLPY
SVRYMMESSADSYELQEGSTSDLVNARVSGEILSIVLMKYQGRDWHGHIRIQQEMPEFLP
VCLTCNSDSNMSVDVSVHVTRTTSCLLLSLFSPYWIINKTSRVLQYRAEDISVKHPADYR
DIVLFSFRKKNLFSKSKIQLCISTSSWSDAFSPDTVGSYGCVRCPANNMDFLVGVSIQMS
SFNLTRIVTMSPFYTLVNKSSYELEVGEVSSQMSTRWHYISSTECLPLWPENSSGKLCVR
VVGSESTSKFFFFNRQDNGTLLSLDVCGGIIVEVNISDHSTIISFNDYYEGAAPALLLNH
TPWVTISYRQSGSVTVHELKPSEARRFVWDDPAGVQMLSWSCMEHCGELDLLKDDVGQFS
YDSLSQVHWVSFLDGRQRVLLFTEDVGIVTKARQAEELEQFQQEVKVSLQNLGLSLINNT
GRQEIAYIGITSSGVVWEMKPKNRWKPFNQKNINLLEKTYQNQLSRKTEGGWVKLETNLE
VNLCGATMMMRQPLSCPVRRNFLSGIQVEFKQSLHQRSLRAQLHWLQVDNQLPGAIFPIV
FHPVPPPKSIALDSEPKPFIDVSVITRFNQHSSVMQFKYFMALVQEMAVKIDQGFLGAIL
ALFTPAADPQADQKARLLERDLKLLQTELMEASLTDTSGLSFFEHFHISPIKLHLSLSLG
SSGEDSAQEVAAVQSLNLLLKSIGATLTDVDDLIFKLAFFEVKYQFYRREKLMWAVVQHY
TEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPFQGAVQGPEEFAEGFVIGVRS
LLGHTVGGAAGMVSRITGSVGKGLAAITMDKEYQQKRREEMNRPPRDFGESLAKGGKGLL
MGVMGGVTGIVTKPVEGAKKGGAAGFFKGIGKGLVGVVARPTGGIVDMASSTFHGIQRAA
ESTEEVTKLRPVRLIREDGIIRPYDLTESQGFDLFQRSEIKQLEGEVFRNHCPYPGHRKT
NIIVTNRRVLCVKEIDFVGHFNREWECLFENFYRPPAVTGSELKIYCKEQQKLKLPKRDG
QESVRNVQLCDSNIAQKLQAAISEAQVAQQQHRMSRQKSQRFLKVNNKQ
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggggcgttacaagtcggtcgcgttcactacaccaagtacctggcagggccccatcaag
gaaggaggggaaactcttctcagcaatgaagaggaggaagctctggagacgctgaagttt
aacttcaacatcgagtctctggggctggttctgtacagcaccgacccaaaacagccgtcg
gacctgcagcatcagcagaacctgaggctgggcgagtttgcgctccacctgctgaagact
tcagggaagatcctgagcagcggcagcgtggaggtgaccaccgtgctcagcggctgcacg
ctggacgacctgagggcgggcatggagaggacgacttcacggatggtgggccgcagagac
gaggacagccccgaggcgatgatcgacgtgacgtaccggcagagcgctgcagagcgggag
gtcgtggctgtccttcagaagctctacctgtgtgccagcgtggagtttctgatggccgtc
acagatttcttcctgcaggctctgccacagatgcccacctcggtacagagcaacagactg
ccgctgagacagaccactgagccacgagccgacggcaagaccgcctcgacgctccgcact
cgcctgcgggcagtggtggtggacccggaggtggtgttcgtggccagcctgatgaaggca
gacgcccccgcccttgtggcgtcctttcagtgcgacttcagcctgcaggccgaggaggac
ggcacccagaacatgagagccaacctgagggagctgaaagtcctcgcctgccccttcatc
cggaacaaggaggacactgccgtcaccaccgtgttgagaccctgctctgtcgccttggag
accagaacccaccctaaccaaccgctgagcggctctgtgacggtggaggaagtcatcgtc
aagatctctccattcatcctcaacacagtaatgacgataactgccgccatgactgcgaag
cagggtgacgagcagagtaaggagtcgcagacggaggtcagtgacctctggtctgtcatg
aacatctacggttgtaacttctggttcctgggagtagacgcggccaccgaggtcactgag
agcttcagggagcaggatggacgcagtgagggcgagagcttcaccgccgaggtcaaggtg
gtccaggtgactctggagtccggctcgggtcaccggaccgctcctctactgcttgccgag
tcctccttcagcggctcggccagaaactggtcttctttgctgcagctgagagctgacatg
actctggaggtgaactactttaatgagctgcaggcggtgtgggagcctctgatcgagctt
gtggacggcggcagacgcaggtggaacctggagctagagatgaagaacagcccgctacag
gataagagtcccgttcacggagacgactttgtcatcctgcctgaacctcgcacggccgtc
agcatctgctccagagacacgatgaacatcaccgtgtcccagtgcagcctccgcgtcctg
cacaaccttgccacggcattctcagagggcacagggtccagcttcgacccctccctaaag
gagaaggcccccttcaccatcaggaacgctctggggatccctctcattgtgcagcacagc
gccaccctgaggcctctgggctcactggtgcaggggaagctccacgagctgctggtggat
cagaccatggacttggagcactccatgttcaaaacgtcctcacggggaaaactgtcggct
ctgcagcggcaagagagctgcctgttcaacctcaccgtcgttccctccggatacagcgag
atctccaacatcgctgtgaacaaacctggtcgccgtctctacaacatccggggtccaatg
ctgcaggaggccgtttctgttctgctgcagatcgacgccgctgatggaaacaaggtcatc
acggtccgctcaccgctgcagataaagaatcatttctctgtgccgttcaccatcctgatg
tactgcccatcatccaggagcctgcagagcatcggacaggccgagcccgagagggagttt
cacatttctttagcaacatacagatgtcagctgtttgtgcgtcctgcggggcatctcgac
ggtcattacagcccgtcctccacctgtgtggcatggaaggagcaggtgcaccacagctcg
gaggtgcgctcggtactgcagtgccccgcggccgactgcagcctgctgccgctgatggtc
agcacgttggctgtgcccgacgagctgcgacacatcgccagccacggagaggaggactgg
gacccagcctacatcatccacctccatcctgtggccaggctgagaaatctgctgccctac
agtgtgcgctacatgatggagagctcagcggactcctatgagcttcaggagggaagcacg
tcggaccttgtgaacgctcgtgtctcaggtgagatcctgtccattgtgctgatgaagtat
cagggccgtgactggcacggacatatccggatccaacaggaaatgcccgagttcctgcct
gtgtgtctcacctgcaactcggacagcaacatgtcagtggacgtaagcgtgcatgtgacg
aggactactagctgcctgctgctgtcgctcttcagcccctactggatcatcaacaagact
tctcgcgtgctgcagtaccgagccgaggacatcagtgtcaaacaccccgccgactaccgg
gacatcgtcctattctccttcaggaagaagaacctcttcagcaagagcaagatccagctg
tgcatctccaccagctcctggtccgatgctttctctccggacaccgtgggaagttatggc
tgcgtccgctgccccgccaacaacatggacttcctggtgggtgtgagtatccaaatgagt
agttttaacctgacccggatcgtcaccatgagtccgttctacaccctggtcaacaagtcg
tcctatgagctggaggtcggagaggtcagcagccagatgtccaccaggtggcactacatc
tcctccactgagtgcctccctctgtggccggagaacagttcggggaagttgtgtgtccgt
gtggttggatctgaatccacctccaagttcttcttctttaaccggcaggacaacggcacg
ctgctgagcctcgatgtgtgtggcgggatcatcgtggaagtcaacatttcggaccactca
accatcatcagcttcaatgattactacgaaggagcagctccagctctgctgctcaaccac
acaccctgggtcactatcagctacaggcagagcggctcagtgacggttcacgagctgaaa
cccagcgaggctaggcgctttgtgtgggacgacccagcaggcgtccagatgctcagctgg
agctgcatggagcactgtggagagctggacctgctgaaggacgatgtggggcagttctcc
tacgacagcctgtctcaggtgcactgggtttccttcctggacggacgccagcgggtgctg
ctgttcacggaggacgtcggcattgtgacgaaggctcggcaggccgaggagctcgaacag
tttcaacaggaagtgaaggtgtcgctgcaaaacctcggactgtctctgatcaacaacacc
ggccggcaggagatcgcttacatcggcatcaccagttcaggtgtggtttgggagatgaag
ccaaagaatcgctggaagccgttcaatcagaagaacatcaacctgctggagaaaacttac
cagaaccagctgagcaggaagaccgagggaggctgggtgaaactggagaccaacctggag
gtaaacctgtgcggagccaccatgatgatgcggcagccactttcctgcccggtaaggagg
aacttcctgtctgggatccaggtggaattcaaacagtcgctgcaccagcgcagcctgcgg
gcccagctgcactggctacaggtggataaccagctgcccggcgccatcttccccatcgtc
ttccaccctgttcctcctcccaagtctatcgctctggactcagagccaaagccgtttatc
gacgtgtccgtcatcacaaggttcaaccagcacagcagcgtcatgcagttcaagtacttc
atggctctggttcaggagatggcggtgaagatcgatcagggtttcctgggagccatcttg
gctctgttcacccccgctgctgacccgcaggctgaccagaaggcgcggctgctggagaga
gacctgaagctgctgcagacggaactgatggaggcgtcgctcaccgacacgtcgggactc
agcttcttcgaacatttccacatctcccccatcaagctccatctcagtctgtctctgggc
tccagcggcgaggactcggctcaggaggtggcggccgtgcagtccctcaacttgttgctg
aaaagtatcggagccacgctgaccgacgtggatgacctgatcttcaaactggccttcttc
gaggtaaagtaccagttttaccgaagagagaagctgatgtgggcagtggtccaacactac
actgagcagttcctgaagcagatgtatgttctggttctgggtctggacgtcctggggaac
ccttttggactgatccgaggtctgtcagagggagtggaggccttcttctacgagcctttc
cagggggcggttcagggcccggaggaatttgctgaaggttttgtgatcggagtccgcagc
ctgctgggtcacaccgtcggtggcgctgcaggcatggtctccaggatcacaggctcggtg
ggtaaaggtctggccgctattactatggacaaagagtaccaacagaaacgccgcgaggag
atgaaccgcccgccgagagacttcggagagagtctggctaaaggagggaaaggactgctg
atgggtgtcatgggcggagttacaggaatcgtcaccaaaccagtggagggggcgaagaaa
gggggcgcagcaggtttctttaagggcatcggtaaaggtctggtgggtgtggtggctcgg
ccgacaggcggcattgtggacatggcgagcagcaccttccacggcatccagagagcggcg
gagtcgacggaggaagtgaccaaactgcgtccggtgcgtctgatcagggaggacgggatc
atccgcccgtacgacctgacagagtcgcagggcttcgacctctttcagcgctcggagatc
aaacagctggagggtgaagtgttccgaaatcactgtccgtaccccggacaccgaaagacc
aacatcatcgtcaccaacaggagggttttgtgtgtgaaagagatcgactttgttggtcat
ttcaacagagagtgggaatgtttgttcgagaacttttaccgacctccagctgtgacggga
tctgagctgaaaatctactgcaaggagcagcagaagttgaagttaccaaagagagacggt
caggagtcggtgaggaatgttcaactttgtgactcaaacattgctcagaagctgcaggcg
gcgatatcggaggctcaggtggctcagcagcagcatcgcatgtcgagacagaaatcacag
cgcttcctcaaagtcaacaacaaacagtga
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integrated database retrieval system
