KEGG   Cottoperca gobio: 115005913
Entry
115005913         CDS       T07513                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cgob  Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgob03041]
    115005913
Spliceosome [BR:cgob03041]
 Complex B
  Other components
   Complex B specific factors
    115005913
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Ge1_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F VPS8_N PROPPIN zf_topless WD_LRWD1 LisH Beta-prop_IFT122_2nd DUF7165 LisH_PAC1
Other DBs
NCBI-GeneID: 115005913
NCBI-ProteinID: XP_029283745
Ensembl: ENSCGOG00000015713
UniProt: A0A6J2PDQ0
LinkDB
Position
Unknown
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLQRTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQIIRIHGLKSGKTLKEFRGHSSFVNEATFTLD
GHNVISASSDGTVKMWNMKTTECSNTFKPLGTSAGTDITVNNVMQLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TIHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatccgcagatgtgatccgtctgatcatgcagtacctgaaggag
aacaacctgcagcggactctggtcaccctgcaggaggagaccaccgtgtctctgaacacc
gtggacagcatagagagctttgtggcagacataaacagcggtcactgggacactgtcctg
caggccatccagtccctcaagctgccagataagaccctgatagacctctatgagcaggtg
gtgttagagctgatcgagttgagagaactgggtgcagcccgttccctcctcaggcagact
gaccccatgatcatgctgaaacagacgcagccagagagatacatccacctggagaatctg
ctggctcgctcgtacttcgatcccagagaggcgtacccggacggcagcagtaaggagaag
cgtcgggcggccatcgcccaggctctggcaggggaggtcagcgtggtgcctccctctcgt
ctcatggctctgctgggacagtccctgaagtggcagcagcatcagggcctcctgcctcct
ggtatgactatcgatctgttcaggggtaaagctgccgttaaagatgtggaggaggagcgc
ttccccacgcagctcagcagacacatcaagtttggacagaagtctcacgtggagtgttcc
cgattctcccccgacggtcagtacctggtcaccggctctgtggacggcttcatcgaagtc
tggaacttcaccaccggcaaaatcagaaaggatctgaagtaccaggctcaggataacttc
atgatgatggacgatgctgtgttgtgtatgggcttcagtcgagacacagagatgttggcg
accggagcccaggatggaaagattaaggtgtggaagatccagagtggtcagtgtctgagg
aggtttgagcgcgcccacagtaaaggagtaacgtgcgtgagcttctgtaaagacagcagt
cagctcctcagcgcctccttcgaccagataatcagaatccacggactgaagtcgggtaaa
actctgaaggagttccgcggccactcgtccttcgtgaacgaggcgaccttcactctagac
ggccacaacgtcatcagcgcttcctcggacggcacggtcaagatgtggaacatgaagacc
accgagtgctccaacaccttcaagcctctgggcacgtcggccggcaccgacatcacggtc
aacaacgtcatgcagctgcccaagaaccccgagcactttgtcgtgtgcaaccgctccaac
actgtggtcatcatgaacatgcaggggcagatcgtgaggagcttcagctccggtaagagg
gaaggtggtgactttgtgtgctgcactctgtcgccccgaggcgaatggatctactgcgtg
ggggaggactttgtgctctactgcttcagcaccgtcaccggcaagctggagagaacgctg
acgatccacgagaaggacgtgatcggcatcgcccaccacccccaccagaacctcatcggc
acctacagcgaggacggtctgctgaagctctggaagccttga

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