Cottoperca gobio: 115005972
Help
Entry
115005972 CDS
T07513
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115005972 (ddx27)
03009 Ribosome biogenesis [BR:
cgob03009
]
115005972 (ddx27)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115005972 (ddx27)
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115005972 (ddx27)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
Pre-60S particles
Helicases
115005972 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
115005972
NCBI-ProteinID:
XP_029283829
Ensembl:
ENSCGOG00000018444
UniProt:
A0A6J2PEJ9
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MLQQLGLIGTIRDEEESPEEPDTESEQEDQPIVLNRKKKLGSCGTKDFNTNFEFGERDGL
NDDDSWVMADIMKQIKNKRTATTLDQKIEKIRKKRKAEEKSAESDTAEGSVGKNQEEDKD
DDDDEEQDVKPAAGEADGDEDEEDEFDSSDEEILTKSDTLRDKERRGRKRKMGEEAPESY
YEDASQYDDQLTFEDMNLSRPILKAITAQGFKLPTPIQQACVPVGLLGRDLCACAATGTG
KTAAFILPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGL
DLKSQEAALRVGPDVLIATPGRLIDHLHNTPTFELTHIEILILDEADRMLDEYFEEQMKE
IIRMCSFNRQTMLFSATMTEEVKELAAVSLKQPIRIFVNSNTDVAPFLRQEFVRIRQNRE
GDREAVVSALLTRTFQDHVMCFTQTRKQAHRLHILLGLMGLKVGELHGELSQSQRLENLR
RFKDDQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLV
GESERKILKEVVKSAKNSVKARVLPPDVILKFRDLISKLEKDVEAVMRLEREEREFAASE
AKLSVAQKRLDGSSSVCQSQRVWFQTQQERKQSRVSKALQEFDLALRGKKKRQKFLQDGG
KKEPTSEERAQFEILKAQMFAERAAKRERRPKRARAMPEEETPCKTANHKGGKGGKQSVF
DKELTNTSSKALKTYRAGPSFEDRKRLGLDRKRPGLDRKRPGLDRKRPGGSRFNKKK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcagttaggtctgatcgggacgatccgggacgaggaggagagtccggaggag
cccgacaccgagtccgagcaggaggaccagccgatcgtcctcaacaggaagaagaagttg
gggagttgcggcacgaaagactttaacactaactttgagtttggcgagagagacgggctg
aacgatgacgacagttgggtgatggctgacatcatgaagcagatcaagaacaagagaact
gcgaccactctggaccagaaaatagagaaaatcaggaagaagagaaaagctgaggagaaa
tctgctgagagtgacactgctgaaggttctgtggggaagaaccaggaggaggataaagat
gatgatgatgatgaagagcaggatgtgaagccagctgcaggagaggctgatggagatgaa
gatgaggaggatgagtttgattcaagtgatgaggagattctgaccaaatcagacaccctg
agagacaaagagcgacggggaaggaagaggaagatgggagaggaggctccggagtcgtac
tacgaagatgcgtcgcagtacgacgatcagctgacctttgaagacatgaacctgtcccga
ccgatcctgaaggccatcacagctcagggcttcaagctgccaactcccatccagcaggcc
tgtgttcccgtcggcctgctgggcagagatctgtgcgcctgcgctgctaccgggaccggg
aagactgcagccttcatcttgccggtgctggagcgcttggtttataaacccaggacgtcc
caggtgacccgggtcttggttctggttcctactagagagttggggatccaggttcactct
gtggcccggcagctggcccagttcacctccatcaccacctgcctggctgtcggtgggttg
gacctaaagtctcaggaggctgcgttgagagtggggccagatgttctgatagctacacct
ggccggctgatcgaccaccttcacaacacgccgacctttgagctgactcacattgagatc
ctgatcctggatgaggccgacaggatgttggacgaatactttgaggagcaaatgaaggag
ataataaggatgtgttccttcaacagacagaccatgttgttctccgccaccatgacggag
gaggtgaaggagctggcggcagtttcgttgaagcagccaatcaggatctttgtaaacagc
aacactgacgtcgctccgtttctgcgacaagagtttgtccgaatccgacaaaaccgagag
ggagacagagaggccgtggtgtctgccctgctgacccggaccttccaggatcatgtgatg
tgtttcactcagacgaggaaacaggctcacagactgcacatcctgctgggactgatgggg
ttgaaggtcggagagctgcatggagaactgagccagagccagagactggagaacctcagg
cgctttaaagatgatcagattgatatcttggtggcgacggatgtagcagccagaggtctg
gacatcgatggagtcaaaacagtgataaacttcaccatgccgtccacagtgaagcactac
gttcaccgtgtcggtcggacggcgagagccggtcgttcaggacgttcagtgtcgctggtg
ggagagtctgagaggaagatactgaaggaggtcgtgaagtccgccaagaacagcgtgaag
gctcgagtcctgccgccagatgtcatcttgaagtttagagatctgatctcaaaattggag
aaagacgttgaagctgtgatgcggctggagagagaggagagagagttcgctgcgtctgag
gccaagttgagtgttgctcagaagcgcctcgatgggtcttcctccgtctgtcaatcacag
cgagtttggtttcagactcaacaggagaggaaacagagccgagtgtcgaaggctctgcag
gagttcgatctcgctctgagaggaaagaagaagagacagaagttcctgcaggatggcgga
aagaaggagccgacgtctgaggagcgcgctcagttcgagatcctgaaggctcagatgttc
gctgagcgagcggcgaagagagagagacgcccgaagagagcgagggcgatgccggaggaa
gagacgccgtgtaaaacagccaatcacaaaggaggaaaaggcggaaagcagtctgtgttt
gacaaagagctgaccaacaccagcagcaaggctctgaaaacctacagagctggaccgtcc
tttgaggacaggaagcgtctgggtttggacaggaagcgtccgggtttggacaggaagcgt
ccgggtttggacaggaagcgtcctggcggctcgaggtttaacaagaagaagtga
DBGET
integrated database retrieval system
