Cottoperca gobio: 115006057
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Entry
115006057 CDS
T07513
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115006057 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115006057 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115006057 (pcdh20)
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115006057 (pcdh20)
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Protocadherins
115006057 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TM_ErbB1
NT5C
Motif
Other DBs
NCBI-GeneID:
115006057
NCBI-ProteinID:
XP_029283945
UniProt:
A0A6J2PE99
LinkDB
All DBs
Position
3:15241490..15244595
Genome browser
AA seq
889 aa
AA seq
DB search
MFNSRHPSLSKRGGIWGLCIILLYTSPLSCFANFSQAKELIYKIKEGLPRGTFIGAIGID
LNLDFTVKPPFLFNLPQKKVSGQYVNLNNTTGELYTSATEIDRETLCPDNSDGQGCVLSL
DVFLLPQQYFQLIKVKIFIDDVNDNRPKFPVDEICMFVPENTHINARYAVEQSAVDPDLG
LYGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVIEVLDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQMNVTLHGNTTKGAHLARLHAFDHDLGANAQISYAYS
ERVPKDTRSLFHLDRITGLIKLAGKIDTGTATFYKLTILANGPGCIPAVATVSVHIIKVV
TGPPAVIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKNIDMNQRVNCHLEGTGPFRIGPY
QLLKNEYLLETTEPLDYEKTQEYELIVVAKNARELIIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLKATDHDSEGRGEVIYLLGGDAPGIFIVDRVTGVLTVTTSLDRE
EKETYRFIVRAVDQGTPRRETIATVVVSVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVADADAEENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSSITMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVTDHGQPEPLYSTVMVNFF
VNETVSNESYIQNLLTREAEIEVEERPWYKGQMTEGPERYELFPCQPVLIALSVTCLGLF
FLVVTLTSYICCKRFKKQRKKRSEVEIPLKMKNDSMQVVNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacaccccagccttagcaaaagaggaggaatatggggattgtgcatc
atcttgctttacaccagccctctttcctgttttgcaaatttcagccaagcaaaagagctg
atctataagataaaggaaggattacccagagggaccttcataggggccattggaatagac
ttaaatttggattttactgtgaagcccccctttttattcaatctaccgcaaaagaaggtc
agtggacagtatgtgaacctaaataataccaccggggagctttacacgtctgctacagag
attgacagggagaccctttgtcctgataactctgatggacagggatgtgttctctcactg
gatgtgtttttgttgcctcagcagtactttcagctcattaaagttaagatctttattgac
gatgtgaatgacaacaggccgaaattccccgtggatgagatctgtatgtttgttccggaa
aacacacacatcaatgcccgttatgcggtggagcagtcggcagttgacccggacctggga
ctttacggcgtgcagacctactggcttgttaatgactttggcatgttcactctggatgtt
gaggagaatgagggaggggaactgacacccttcctcattgtgatagaggttttggacaga
gagacccaggctgaatatattacggatatcattgcagaggatggagggacccctccttta
cttggagcggctactttaaaaattgtcatcacagatgtgaacgataactgcccccaattt
acagagtcacaaatgaatgtcactctgcatgggaataccaccaaaggggcacatttggca
cgtctgcatgcttttgaccatgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaaaggacaccaggagcttgttccatttggacagaatcactggactgatc
aagctagcagggaagatagacactggcacagccacgttttacaaactcaccattcttgcc
aatggacctggttgtatccctgcagttgccactgtttctgtccatatcatcaaagttgtt
acaggaccccccgctgtcatacctcgatacattgcaccagaaaaggatggggtggtgacc
ataaaggagtctgagccagcattttctccaattgctttttttactgtcaaaaacattgat
atgaaccaaagggtgaactgtcatttggaagggactgggcctttcaggattggcccctat
cagctgctcaagaatgaataccttctggagacaacagagcccttggattatgagaagaca
caggagtatgagctaattgtggttgctaagaatgctcgagagcttatcatcaagaccttc
ctcaaggtgcaggtattggatgagaatgataatgcaccagtgtttcagcagtctttggtg
gaaatatctgtagaggagaacaatcctccaaataccttcctgacccagctcaaagccaca
gaccatgacagcgaaggccgaggggaagtcatttacctccttggaggtgacgccccaggg
atctttattgtggatcgtgtgacaggtgtcctgaccgtgaccacatcactggaccgtgag
gagaaagagacataccggttcatagtgagagcggtagaccaggggacacccaggagggag
acaattgcaactgtggtggtgagcgttcaagaccgcaatgacaacagtccacgcttcatc
aataaagacttcacgttctttgtgccagagaacttcccggggtacggtgagattggggtc
ctctctgtggctgatgctgatgctgaggaaaatggttgggtggctctttctatcctcaac
ggcagcgacatcttcatgatagacacaggcagaggggcattaagggccaagacatcactg
gatcgtgagcaacaagggacatatcagctgtggattgaggcagtcgatggtggggagcct
gctctttcctctattactatggtgaccgtgctgttgttggatgtaaatgacaacccacct
attgtcctctttccccagtccaatcagtcttacatgctggtcctacccaatacactacca
ggaacatcaataacagaagtctacgctgtggataaggatacaggaatgaatgctgtgatc
gcctatagtatcattaagaggaaagggggcgagccagggtcatttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaaccggggcctctacagccttctggtg
aaggtcactgatcacggtcagcctgaaccactttactcaacagtcatggttaacttcttt
gtcaatgaaacagtaagcaacgagagctacatccagaacctgctgacaagagaggctgaa
attgaggtagaggagaggccctggtataaaggccagatgacagaggggcctgagaggtat
gagttgttcccctgtcagcctgtcctcattgctctttccgtgacatgtctggggctgttc
ttcttggttgttactctgacatcttacatatgctgtaagagatttaaaaagcagcgaaag
aaaagatcagaagtggagatacctttaaaaatgaagaatgactcaatgcaggttgtgaac
agaaagctaaggcagatctctaacatctga
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