KEGG   Cottoperca gobio: 115006057
Entry
115006057         CDS       T07513                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
cgob  Cottoperca gobio
Pathway
cgob03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    115006057 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgob01009]
    115006057 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgob04515]
    115006057 (pcdh20)
Protein phosphatases and associated proteins [BR:cgob01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115006057 (pcdh20)
Cell adhesion molecules [BR:cgob04515]
 Cadherins
  Protocadherins
   115006057 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th TM_ErbB1 NT5C
Other DBs
NCBI-GeneID: 115006057
NCBI-ProteinID: XP_029283945
UniProt: A0A6J2PE99
LinkDB
Position
3:15241490..15244595
AA seq 889 aa
MFNSRHPSLSKRGGIWGLCIILLYTSPLSCFANFSQAKELIYKIKEGLPRGTFIGAIGID
LNLDFTVKPPFLFNLPQKKVSGQYVNLNNTTGELYTSATEIDRETLCPDNSDGQGCVLSL
DVFLLPQQYFQLIKVKIFIDDVNDNRPKFPVDEICMFVPENTHINARYAVEQSAVDPDLG
LYGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVIEVLDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQMNVTLHGNTTKGAHLARLHAFDHDLGANAQISYAYS
ERVPKDTRSLFHLDRITGLIKLAGKIDTGTATFYKLTILANGPGCIPAVATVSVHIIKVV
TGPPAVIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKNIDMNQRVNCHLEGTGPFRIGPY
QLLKNEYLLETTEPLDYEKTQEYELIVVAKNARELIIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLKATDHDSEGRGEVIYLLGGDAPGIFIVDRVTGVLTVTTSLDRE
EKETYRFIVRAVDQGTPRRETIATVVVSVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVADADAEENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSSITMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVTDHGQPEPLYSTVMVNFF
VNETVSNESYIQNLLTREAEIEVEERPWYKGQMTEGPERYELFPCQPVLIALSVTCLGLF
FLVVTLTSYICCKRFKKQRKKRSEVEIPLKMKNDSMQVVNRKLRQISNI
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgttcaacagcagacaccccagccttagcaaaagaggaggaatatggggattgtgcatc
atcttgctttacaccagccctctttcctgttttgcaaatttcagccaagcaaaagagctg
atctataagataaaggaaggattacccagagggaccttcataggggccattggaatagac
ttaaatttggattttactgtgaagcccccctttttattcaatctaccgcaaaagaaggtc
agtggacagtatgtgaacctaaataataccaccggggagctttacacgtctgctacagag
attgacagggagaccctttgtcctgataactctgatggacagggatgtgttctctcactg
gatgtgtttttgttgcctcagcagtactttcagctcattaaagttaagatctttattgac
gatgtgaatgacaacaggccgaaattccccgtggatgagatctgtatgtttgttccggaa
aacacacacatcaatgcccgttatgcggtggagcagtcggcagttgacccggacctggga
ctttacggcgtgcagacctactggcttgttaatgactttggcatgttcactctggatgtt
gaggagaatgagggaggggaactgacacccttcctcattgtgatagaggttttggacaga
gagacccaggctgaatatattacggatatcattgcagaggatggagggacccctccttta
cttggagcggctactttaaaaattgtcatcacagatgtgaacgataactgcccccaattt
acagagtcacaaatgaatgtcactctgcatgggaataccaccaaaggggcacatttggca
cgtctgcatgcttttgaccatgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaaaggacaccaggagcttgttccatttggacagaatcactggactgatc
aagctagcagggaagatagacactggcacagccacgttttacaaactcaccattcttgcc
aatggacctggttgtatccctgcagttgccactgtttctgtccatatcatcaaagttgtt
acaggaccccccgctgtcatacctcgatacattgcaccagaaaaggatggggtggtgacc
ataaaggagtctgagccagcattttctccaattgctttttttactgtcaaaaacattgat
atgaaccaaagggtgaactgtcatttggaagggactgggcctttcaggattggcccctat
cagctgctcaagaatgaataccttctggagacaacagagcccttggattatgagaagaca
caggagtatgagctaattgtggttgctaagaatgctcgagagcttatcatcaagaccttc
ctcaaggtgcaggtattggatgagaatgataatgcaccagtgtttcagcagtctttggtg
gaaatatctgtagaggagaacaatcctccaaataccttcctgacccagctcaaagccaca
gaccatgacagcgaaggccgaggggaagtcatttacctccttggaggtgacgccccaggg
atctttattgtggatcgtgtgacaggtgtcctgaccgtgaccacatcactggaccgtgag
gagaaagagacataccggttcatagtgagagcggtagaccaggggacacccaggagggag
acaattgcaactgtggtggtgagcgttcaagaccgcaatgacaacagtccacgcttcatc
aataaagacttcacgttctttgtgccagagaacttcccggggtacggtgagattggggtc
ctctctgtggctgatgctgatgctgaggaaaatggttgggtggctctttctatcctcaac
ggcagcgacatcttcatgatagacacaggcagaggggcattaagggccaagacatcactg
gatcgtgagcaacaagggacatatcagctgtggattgaggcagtcgatggtggggagcct
gctctttcctctattactatggtgaccgtgctgttgttggatgtaaatgacaacccacct
attgtcctctttccccagtccaatcagtcttacatgctggtcctacccaatacactacca
ggaacatcaataacagaagtctacgctgtggataaggatacaggaatgaatgctgtgatc
gcctatagtatcattaagaggaaagggggcgagccagggtcatttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaaccggggcctctacagccttctggtg
aaggtcactgatcacggtcagcctgaaccactttactcaacagtcatggttaacttcttt
gtcaatgaaacagtaagcaacgagagctacatccagaacctgctgacaagagaggctgaa
attgaggtagaggagaggccctggtataaaggccagatgacagaggggcctgagaggtat
gagttgttcccctgtcagcctgtcctcattgctctttccgtgacatgtctggggctgttc
ttcttggttgttactctgacatcttacatatgctgtaagagatttaaaaagcagcgaaag
aaaagatcagaagtggagatacctttaaaaatgaagaatgactcaatgcaggttgtgaac
agaaagctaaggcagatctctaacatctga

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