Cottoperca gobio: 115006092
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Entry
115006092 CDS
T07513
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115006092 (chd9)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115006092 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
115006092
NCBI-ProteinID:
XP_029284009
Ensembl:
ENSCGOG00000022957
UniProt:
A0A6J2PF51
LinkDB
All DBs
Position
3:28092335..28153939
Genome browser
AA seq
3018 aa
AA seq
DB search
MDFFDDPNLFVGGLEGLDEDVFPSAPSLVDELNLTADFEPLQVEPLDPGKHQDMIPPVAT
QQTIPAYSQQISHYLGIKAQTPMGQAFSSPGGTGSGGGCMIADQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNQDQNGNMYHPLSQQQQQLCQQQQQQQQQQLHNQQLHVRQQQTQQQQH
HPCHQQQEQQHIMQQQLQQQQSHQQQLLNQRQHQQINAHTMTLQQQQQQQHNFSFHQRGQ
SRSQQQDNHTRQQPQHQLTVGGPRFHSGAVPSKSYLDGQNASLSATCLQPQQQQGSYQLT
RGGQAFSGSGTEDPNLPFPMHSSSMVHSLPTCSVSSATAYQAAPYPAYPGESEIPSLTQQ
SLATASVSVPITPAASLTSTVPELSGTVCQFPSTAVMRTPVIQPEECPFRALRCSGETQG
NCKSSEIFGQSMNCYPSMASQLPAEPPQSCRAINTNGYQAMGDNLLPSEAQDGDLEGLEP
PDLLPDLLPQLEAALSQHDESNCSWVDSSQERGHEQGKPQPVEYKEEKPRKNANGPGSQV
RVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRTSRRTNNQMESGSQDKQEKANRIISEAIA
KARQRGEKNIPRVMSPESFPSSSSQSKHRKRQHKGSGKARAKEKACRKACIVPSSKFKQK
SKIGKIVIKIGKKKKRKPESSEESDDDPPPRHTSKDDDSKRRSNRQVKRKKYHEELEARL
SDDEVKVIVKAKKSHSGASKLPAVQLFVENPSEEDAAVVDKIMSSRVVKKEASPGMVVEG
EEFFVKYKNYSYLHCEWATEQQLVKDKRIQQKIKRFKMKQAQRALFFADMEEDPFNPDYV
EVDRVLEVSYCEDKDTGEEVVYYLVKWSSLPYEDSTWELKDDVDQSKIEEFELLQAVKPD
SRRMDRPPANMWKKRILSRAYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTI
QSITFLEEIYRVGIKGPFLIIAPLSTIANWEREFRTWTFLNVIVYHGSMVSRQMLQQYEM
YFRDAQGRPMRGAYRFQAVITTFEMILGGCPILNAIEWRCVIIDEAHRLKNKNCKLLEGF
KLMNLEHKALLTGTPLQNTVEELFSLLHFLEPARFPSEVTFMQEFGDLKTEEQVQKLQGI
LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFTFLAKGAGQANMPNL
VNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAFDFHLQAMVQSAGKLVLIDKLLPK
MKAGGHRVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFV
FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYE
REMFDRASLKLGLDKAVLQSMSGRDNSLGGGVGGGAVQQQQQQQLSKKEIEDLLRRGAYG
AIMDDEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVSSGNRTDISLDDPNF
WDKWAKKADIDMDMSNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGNSDSDDTKPKLR
RNHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTERDVESICRALLSYCLV
HYRGDDKIKSFMWDLIAPSEDGCTKELQNHLGLSAPVPRGRKGKKMKIQSSSFDIHKAEW
LRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQVVLDGVDSSEIKIW
VPDPDHSDLPALWWDAIADKCLLLGVYKHGYEKYNTLRADPTLCFLDRVGRPDEKAIAAE
QRGNDFMDGDVDDPEYKPAPALMKDDMEDDASSPGDVIVTDNAGDAAPVTEGQTSFWPSP
SVLTARLRRLITASQRFTKSRQILQIHQTQAPSPSTMILSAPLCPLPPTHNDTLNPKMVA
KIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAF
TAMCRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVIRHELLYEHL
LLCQMSSDLPVWWDAGTHDRDLIIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKTAQ
QQSRTSTPLLPPQCQATSSVLTGSPLPPPAQRDAEPCGVVPKVEPASEGEESREEGRETQ
AESWSPPRAPATPTGLDEKPLSEMRDSEMQMVAARTKPLTPNSSERKPKKASKRSRRERE
AKRGSESDSDGSSSSSSSHSSSSSSSSSSSSSHSGSSSSSSSCSSAGSSSSSSSSSSSSS
DGSESEGEEGKKKVAAAAIVKGFDEDSVASLSMMQDETQDTHTAENGIANNSSHPFQGGG
YMLAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCE
DPSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESDEGPQAQQQYL
ARLHELQSASDTGLADITKPQCSVQTAPPGLTGHMRLNGAVEGQPVVKRRRGRRKNVEGM
DLLFMNRSRAPSVPDQMPPGWGGIGQVGMAVAPVPGYSQSSSQVPADTDSRVPVINLKDG
TRLAGDDAPRKKDLEQWLMEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPN
KIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGY
LPESMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAATAPNPISALGLNPLLANGL
LSGMDLTSLQAFQQNFQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNL
LGMSGMLGKPAQDCTGGSEEKTKGTTSGVAGEPSASKASSHASDHKGERTEGSNTTPSST
SSSTSSATAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQPQSSNSD
PTLPPARPPPAVSQSSQELARLAAERDGEEDDEALEDEEEEEDSAEQKENSGPDGSGKAE
SSSESGSSSSSDDSDSSD
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgaccccaacctctttgttggaggtttggaaggactggacgaggat
gtcttcccctcagctccatcgcttgtggatgagctaaacctcactgctgattttgagccc
ctccaagtggagcctctagacccagggaagcatcaagacatgattccaccagttgctacc
caacaaaccatacccgcttacagtcaacagataagtcactatcttggcattaaggcacag
actcctatggggcaggcattttctagtcctgggggcacaggtagtggcggtggctgcatg
attgcagaccaacatggccagtaccataatgctgccatgagccaagtacctcaatccaat
gggctgttctgtaacagtagcagtcccatgtggggcaaccaagaccagaatgggaatatg
taccaccccttatctcaacagcaacaacagctttgtcagcagcagcagcagcagcagcag
cagcaactgcacaaccagcaacttcatgtcagacaacaacaaacacagcagcaacaacac
cacccatgtcatcaacaacaggagcagcagcacataatgcagcagcagctgcaacaacag
caaagtcatcagcaacagctgctaaaccagcggcagcatcaacaaattaacgcacataca
atgaccctgcagcagcagcaacaacagcagcacaatttctcctttcaccaaagaggtcaa
tctcggagccaacagcaagataaccatactcggcagcagcctcagcaccaacttactgta
ggaggaccaaggttccattcaggagctgtaccaagtaagtcttatttggatggtcaaaat
gcttctctgagtgcaacttgcttgcaaccacagcagcagcagggtagctaccagttaacg
aggggtggtcaagccttctctggatcaggaacggaagaccctaacttgcccttccccatg
cattcatcatctatggttcactccctgcccacatgctcagtcagttctgccactgcttac
caagctgctccataccctgcctaccctggagagtcagaaatacccagtcttactcagcag
tctttggccacagcctcagtgtctgtgcccatcacccccgctgcatccctcacttctaca
gtgcctgagctctcggggacagtatgtcagtttccatcaacagcagttatgaggacccca
gtcatccagccagaggaatgtcctttccgggccctacgttgctctggagaaacccaggga
aactgcaagtcatctgagatttttggtcagtctatgaactgctaccctagcatggccagc
cagctgcccgctgagccgcctcagagctgcagggccatcaacactaatggatatcaagca
atgggtgacaatctcctgccatcagaggctcaggatggagacttggagggcctggagcct
cctgacctcctgcctgacctactgccccagctggaggctgctctcagccaacatgatgaa
tccaactgttcctgggtcgattccagccaggagaggggacatgagcaggggaaaccacaa
cctgttgagtacaaagaagaaaagcctcgaaagaacgctaatggtcccggtagccaggta
cgggtcctcagtcccccaatgaaaagcagctcatcgtcctcctcctcttcctcatcatcg
tcatcctcatccagctcctcatctgagaagaggacgtcgcggagaacgaataatcagatg
gagtcaggttcacaggacaagcaagaaaaggccaataggataatatcggaggctattgct
aaggcccggcagcgcggggagaagaacatccccagagtcatgagccctgagagcttcccc
agctcttcctcgcagtccaagcaccgcaagcgccagcacaaaggaagcggcaaggcccgg
gctaaagagaaggcttgtcggaaggcctgtattgtaccctcctccaagttcaaacagaag
tccaagatcgggaaaattgtcatcaagattgggaagaagaaaaagcgaaagccggagtct
tcagaggagtcggatgatgatcctccccctcgacacacttctaaagatgacgactctaag
aggagatctaatcgccaggtgaagaggaagaaataccacgaagagctggaggccaggttg
tcagatgacgaggtcaaggttattgtaaaagccaagaaaagccacagtggagcctccaag
ctgcctgctgttcaactctttgtagagaatcccagtgaagaagatgctgctgttgttgac
aaaatcatgtcttctcgtgtcgtcaagaaggaggcctctccagggatggtggtggaaggg
gaggagttctttgtgaaatacaaaaactactcctacctacactgtgagtgggccacagag
cagcagctggtgaaggacaagaggattcagcagaagatcaaacgcttcaagatgaaacaa
gcacagagggcactcttctttgcagatatggaagaggacccctttaacccggactatgta
gaggtagacagagtgctggaggtgtcgtattgtgaggacaaagacacaggagaggaggtg
gtgtactacctggtgaagtggagctctttgccttatgaggacagcacctgggagctaaag
gacgacgtagatcagagcaagattgaagagtttgagctgctgcaggcagtcaagccagac
tcacgcaggatggaccggcccccagccaacatgtggaagaagaggatactgtcgagggca
tacaggaatggcaacagcctcagggactaccagctagagggggtgaactggctcctcttc
aactggtacaacagacggaactgcatcctggcagacgagatgggcctgggaaagaccatc
cagtccatcacgttcctggaggagatctatcgcgtgggcattaaagggccattcctcatc
atcgcgccgctctccaccatcgccaactgggagcgcgagttccgcacttggacctttctc
aatgtgatcgtctaccatggaagcatggtcagcaggcagatgctccaacagtatgagatg
tatttcagggatgcacagggccgtccgatgcgaggagcctacaggttccaggccgtcatc
accacgttcgagatgatcctgggaggttgtccaatactcaacgccatagagtggcgctgt
gtgatcatcgacgaggcccaccgcctcaagaacaagaactgcaagctgctagagggcttc
aaactcatgaacctggagcacaaggccctgctgacggggactcctctccagaacacggtg
gaagagctcttcagcctgctccacttcctggagccggcacgcttcccctcagaagtcacc
ttcatgcaggagtttggagacctgaagactgaggagcaggtacagaagctccagggtatc
ctgaagcccatgatgctgcgtcggttgaaggaggacgtggagaagaagttggctcctaaa
gaggaaaccatcatcgaggtcgagctcaccaacattcaaaagaaatactaccgcgccatc
ctcgagaagaacttcactttcctggctaaaggagctggccaggcaaatatgcctaacctg
gtcaacaccatgatggagctgagaaagtgctgcaaccacccctacctcatcaaaggggca
gaagagaagatcctagaggacttcagggaggtgtacagccccactgccttcgactttcac
ctgcaggctatggtacagtctgcagggaagctggtcctcattgacaaactgctgcccaag
atgaaggccggggggcacagggtgctcatcttctctcaaatggtgcgctgcctggacatc
ttggaagactacctcattcagagaaggtacttgtacgagcggatagatggtcgtgttcgt
ggtaacctgcggcaggcagctattgaccgcttcagtaagcccgactcggaacgctttgtt
ttcctcctgtgcacacgagctggtggcctgggaatcaacctcacggcagcagacacctgc
atcatctttgactcagactggaacccgcagaacgacctgcaggcccaggctcgctgccat
cggatcggtcagaacaaggcggtgaaggtgtaccgtctgatcacaaggaactcgtacgag
cgggaaatgtttgatcgcgccagcctcaagctgggcctggacaaagcagtgttgcagagc
atgagtggccgagataacagcctgggaggaggcgtcgggggaggggcggtgcagcagcag
cagcagcagcagctgtcgaagaaggagattgaggatctgctgcgacgcggtgcatacggg
gccatcatggatgacgaggatgaaggggccaagttctgtgaggaggacatcgatcagatc
ctccagcgcaggacaaagaccatcaccatcgagtctgagggacgaggatccacctttgct
aaggccagttttgtgtcgtccggaaaccgcacagacatctctctggatgaccccaacttc
tgggacaaatgggccaaaaaggctgacattgatatggatatgtccaacggcagaaacagc
ttggtgatcgacactcctcgtgtcagaaagcagacgaggccgttcagcgccaccaaggat
gagttggcagagctttcagagggcaacagcgacagtgacgacaccaaacctaagctccgg
cgaaaccacgaccgcctcaacagctatgggcgcacagagtgcttcagagtagagaagaac
ctgctggtttatgggtggggtcgttggaaggatattctcaaccacgggcgttttaagaag
cagctgaccgagagagacgtggagtccatctgcagggccctgctgtcttactgcctggtc
cattaccgtggagatgacaaaatcaaaagcttcatgtgggacctgatcgccccgagtgag
gacggatgcaccaaggagctgcagaatcacctgggtttatctgctccagtccctcggggc
agaaagggtaagaagatgaagatccagtccagctcttttgacatccacaaagctgagtgg
cttaggaaacacaacccagagcacatgctgcaggacgacggctacaagaaacacctcaaa
caccactgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaggaggtg
ataggaagccaggcccaggttgtgctcgacggcgtggactccagtgagataaagatctgg
gtgcctgaccctgaccattcggacctgccggccttgtggtgggacgccatcgctgacaag
tgtctgctgctgggtgtctacaagcatggttatgagaagtacaacactctgcgtgcagac
cctaccctgtgcttcctagaccgtgtgggccgaccagacgagaaggccattgccgctgaa
cagagaggcaacgatttcatggatggggatgtggatgaccccgagtacaagcctgctccc
gccctgatgaaggacgatatggaggatgacgcctcttctcctggagacgtgattgtcact
gacaacgccggagacgcagctccagtgacagaaggtcaaacctccttctggccctcgccc
tccgtgctgactgccaggctgaggcgactgatcacagcctctcagcgcttcaccaagagc
cggcagatcctccagatccaccagactcaggctccgtctccgtcgaccatgatactgtct
gcccccctctgcccgctgccccccactcacaacgacaccctcaaccccaagatggttgct
aagattgaacggcaacaaagatggaccagacgagaggaggctgacttctaccgcgtggtc
tccactttcggtgttgttttcgacccaaacctcggccgcttcgactggaccaagttccgg
gccatggctcgcctgcacaagaagactgacgagagcctgcagaaatacctgtgtgctttt
accgccatgtgccgaagggtgtgtcgcctgccacccaaagagggagactctgcggtggac
ccgtctctgaccatccagcccatcacagaggagcgagcgtcccgtacgctgtacagagtc
gagttgcttcgccaggtgagggaacaagtcattcgccacgagttgctctatgagcacctg
ctgttgtgccagatgagctctgacttgcccgtctggtgggacgccggtacccatgaccgt
gacctgataatcggagctgccaagcacggcgtcagccgcacagattaccacattctgaga
gaccctgagctcagcttcatggctgcccaacgcaactacagccaaacaaaaactgcacag
cagcaatcacgcacatccacgccgcttctaccgcctcagtgccaggcaaccagctcagtg
ttgacgggctctccgctgcctccacctgcccagagagacgcagagccctgtggggttgta
cccaaagtggaaccagcctcggagggggaggagagccgggaggagggccgggagacgcag
gcggagagttggagtcctcctcgagcaccagctactcccacaggtctggatgagaagccg
ctgtctgagatgagggacagcgagatgcagatggtggcggcacgaaccaaacccctcaca
cccaactcctccgagaggaaacctaagaaggccagcaagaggagccgcagggagagggag
gctaagcgtggctcagagtctgactcagatggctcctcctcaagctcttcatcgcactcc
tcttcctcctcctcatcgtcctcttcttcctcgtcacattccgggtccagctcctcctca
tcatcttgctcctccgctgggtcgtcgtcatcgtcgtcgtcatcctcctcatcttcttct
gatggcagtgaaagtgagggcgaggaagggaagaagaaagtggctgcagcggcaattgtg
aagggctttgatgaggacagcgtggcgtctctgagcatgatgcaggatgaaacccaagac
acccacacggctgagaacggcatcgccaacaactcctcgcatcctttccagggaggaggg
tacatgctcgctgcatcctactggccgaaggatcgtgtgatcatcaaccgcctggacagc
atctgccaggcggtgctaaagggcaagtggccgggaacacgtcgggtgtacgagcccggc
ggtgcggtggcctccttctacaccaccaagctgctggacaacgccaacagcctgtgcgag
gacccctctgcctcaccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggag
ttctcagtaaaactcaacgatcaggagggaggtctgaagttgactttccaaaaacaaggt
ctacctctgaagaggcccctggagtcggacgagggcccccaggcccagcagcagtacctg
gcccggcttcatgagctgcagagcgcctctgacaccggcctggccgacatcaccaaacct
cagtgcagcgtccagacggcgcctccgggtcttactggtcatatgaggctgaacggagca
gtggaaggtcagccagtggttaagaggcggaggggaaggaggaagaacgtggaggggatg
gacctgctcttcatgaaccggagtagagccccttctgttcctgatcagatgcctcctggt
tggggtggtattggtcaggtgggcatggctgtggcacctgtgccgggctacagccagagc
tccagtcaggtccctgcagacactgacagcagggtccccgtcatcaacctcaaagatggc
acccggctggctggggatgacgctcccaggaagaaggatctagaacagtggctaatggag
caccctggctttgtggcagacactggagcctttatccctggggtaaataagatgcaaatg
cagtttcacttccaggacggtcgacccaagcagaagaggcaccgctgcaggaaccccaac
aagatcgacgtgaacagcctgactggagaggaaagggtccagatcatcaacaggagaaat
gcacgcaaggttggtggagcctttgctcctcctctgaaggatctgtgccggttccttcag
gagaaccccgagtacggagtcccacctgaatgggctgatgtcgtcaaacagtcgggttac
ctcccagagagcatgttcgacaggatcctgacgggacccatcgttcctgaggaggtgagc
cggcgtggacgtcgacctaagaatcctctggccaaggcggcggcggcagcagcagcagct
gctacagcacccaacccgatctccgccctgggtctgaaccccctgctggccaacggcctc
ctctctggaatggacctgaccagcctgcaggccttccagcaaaacttccagagcttacag
tcgctgcagctcactgcgggcctgatggggctgccgtccgacgctagcaacctggctgca
agtaacttagctgccatgtttcccatgatgctgtctggtatggctggattgccaaacctg
cttggcatgagcggcatgcttgggaagcctgctcaggactgcacaggaggctctgaggag
aagacaaagggaaccaccagcggtgtagcaggagagccgtctgcctctaaagcctcctct
cacgcctcagaccacaaaggagaaaggacagagggctcgaatacgactccttcctccact
tccagctccacttcctctgccaccgccccacaaagtgcttcagctgcctctgcagcttcc
agtcacccactatctcttaaccccttgttactctccagtatgctttacccagggatgctt
ctcactccaggccttaaccttcctgtgtctgccacacagccgcagagctcaaacagtgac
cccacccttcctcctgctcgtcctcctcctgcggtctcccagtcatcgcaggagttagct
cggctagcggcagagagggacggagaggaggatgacgaggcattagaagacgaagaagaa
gaagaggactcagcggaacaaaaggagaacagtggtcctgacggttcggggaaagctgag
tcatcttcagaatctgggagctcgtcttcatcagatgattcagactccagtgattag
DBGET
integrated database retrieval system
