KEGG   Cottoperca gobio: 115006220
Entry
115006220         CDS       T07513                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cgob  Cottoperca gobio
Pathway
cgob03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115006220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgob03021]
    115006220
   03036 Chromosome and associated proteins [BR:cgob03036]
    115006220
Transcription machinery [BR:cgob03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115006220
   Coactivators
    SAGA/TFTC/STAGA complex
     115006220
Chromosome and associated proteins [BR:cgob03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115006220
    STAGA complex
     115006220
    TFTC complex
     115006220
    SAGA complex
     115006220
    SLIK complex
     115006220
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP DSE1_N NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th CFAP251_N PAC11 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Tricorn_2nd ASA1 Beta-prop_WDR19_1st WD40_like PROPPIN PEP5_VPS11_N Beta-prop_IP5PC_F WD_LRWD1 TRIP13_N
Other DBs
NCBI-GeneID: 115006220
NCBI-ProteinID: XP_029284197
Ensembl: ENSCGOG00000013768
UniProt: A0A6J2PGG2
LinkDB
Position
Unknown
AA seq 600 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDSSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYEAQYSRLRCFLSETEISWAKEVSSILYPLFVYLHLDLVHCGLKGAVDGFYS
RFHSAFLQDSEQRATIEQLRHVLTAQDVAANPKLSAFLEHKYLVHLTEPAYSYLLRYLQS
EDNSAVCRALSTHLQVEVTASRRTDYQLYGAAGGATDAPNSTSSWAGVDGAEGVEGVEVP
AGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKAHQADVSLIHLACDVLEEEVEEEDGSGSEVKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYRGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
SVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSLDSSLVASSS
IDNSVRVWDIRNSHAGTPADGSSGELVGLYTGNTSSVLNVQFMACNLLLVTGTAPEKAEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgcactgagcagatccagtacgctgtggctcagtacctgaagcggagg
cagtatgtggacacggacagctccctgaaaggagccaagctcttccagtcagcagaagag
atggctgccagcctcacggtgcagacagagtcgggatgtgccaacatcgtgtctgctgca
ccctgccagtccgaccctcagcagtacgaggctcagtactcgcggctgcgctgctttctc
tcagaaacagaaatatcctgggcaaaggaggtgagcagcatcctctacccgctcttcgtc
tacctccacctggacttggtgcactgcggcctgaagggggcggtagatggtttttacagt
cgtttccacagcgcctttcttcaggacagcgagcagcgtgccaccatagagcagctccgc
catgttctcaccgctcaggacgttgcagccaaccccaagctgagtgctttcctggagcac
aagtacttggtgcacctgacggagccggcctacagctacctgctgcgctacctgcagagt
gaggacaacagcgccgtctgcagggcgcttagcacacacctgcaggtggaggtcaccgcg
tcgaggcgcacagactaccagctctatggagctgcaggtggggcgaccgacgccccaaac
tccacctcctcctgggcgggggtggatggggcggagggcgtagagggggtggaggtccct
gcagggatcccacagagtgaggcagcccttgaggctctgcaggactgcatcaagaaggtc
cgtgagggcccccccacgctcaccaccgtgtgtttttacgccttccatcacacggagcag
atgttgaacaccgcagaggtgtcggccgacagccggctgctggccgccggctttgacagc
tccaccgtgaaactgtggagcctccgagccagaaagctgaaggccaaagcgcatcaggcg
gacgtgtcgctcatccacctggcctgtgacgtgctggaagaggaagtggaggaagaggac
ggctccggcagcgaggtgaagacgctgcgaggtcacagcggccccgtgttccgcaccgcc
ttcctgacggacagctccggcctgctctcctgctctgaggacacaaccatccgctactgg
gacctgggcagcttcaccaacacggcgctgtaccggggccacgcctacccggtgtgggac
gtggacgtcagcccctgcagcctttacttcgccagcggctcccacgaccgcacggcccga
ctctggacgttctcccgcacctacccgctgcggctttacgccgggcatctcgccgacgtc
gactgtgtcaaattccaccccaactctaactacctggccaccggctccacagacaagact
gtgcggctgtggagcacccagcagggggcgtctgttcgcctcttcactggccaccgtggc
tcggtgctgtcgctcgctttctcccctaacgggaagtacttggcgtccgccggcgaggac
cagagggtgaagctttgggacttagcatcagggacgttgttcaaagacctgcggggacac
acggacagcgtcaccagcctgtctttcagcctggacagcagcctggtggcgtcgtcgtct
atagacaactcagtccgggtgtgggacatcaggaactcccacgccggcacgccagctgac
ggctcgtctggcgaactggtgggactgtacactggaaacaccagcagcgtgctgaacgtg
cagttcatggcctgcaacctgctgctggtgacgggaacggcaccagagaaagcggaacag
tag

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