KEGG   Cottoperca gobio: 115006231
Entry
115006231         CDS       T07513                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115006231
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115006231
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115006231
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cgob00535]
    115006231
Proteoglycans [BR:cgob00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   115006231
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115006231
NCBI-ProteinID: XP_029284210
UniProt: A0A6J2PF26
LinkDB
Position
Unknown
AA seq 687 aa
MALSRICRESLLVILLQIVLICSAQRGPVGPRGSQGPLGVAGFPGVDGIDGDRGEDSTVN
GGPGADGDNGKDGAAGAAGLPGADGPVGPPGDPGTAGLNGPKGDAGTRGLAGEPGVGPDG
LDGIPGTDGLPGELGKVGPSGVRGKRGQVGLPGAAGPRGLPGVYQGEDLCPNACPSGLNG
HSGLPGMKGHKGGKGESGEPGRQGHKGEEGEQGLTGEVGAQGLPGPGGSRGLAGIFGSKG
DRGARGKSGDGGPQGIQGGPGDLGQRGAIGELGPVGVQGDRGPSGIRGVPGPEGDPGLAG
PDAREGIPGLPGSKGITAKNGAPGDAGPQGLPGLPGTYGQKGVSGAVGSSGDPGVVGLMG
SPGKQGERGEQGEVGAMGPRGGPGGRGERGPDGPLGSPGARGGKGDPGLPGLPGPAGYRG
QNGDRGGVGLDGPQGDQGGAGDEGTAGGVGELGDQGELGEKGSTGPPGETGNKGPEGGRG
QEGKEGKPGQQGPRGMQGDMGVPGLPGSQGPAGKLLTDTHIKQVCMRVMQEQLAQLAASL
SRPESGISGIPGPPGPPGPQGSSGENGFPGHTGSRGLPGLKGPAGLLGRKGHKGDQGDRG
DKGPTTRGSKGAPGAPGLPGEPGRPAYGKEGREGQRGPRGVSGASGVPGPPGPAGMNGYC
ESSQCVLPMMASPVSAKDSGMKGPSDM
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggctctctccaggatctgtcgagagtctttgctggtgattttactgcaaatcgtgcta
atttgctcggctcagaggggcccggtcggtcccagaggctcccaggggccgctgggagta
gcaggctttcccggtgtggacggaattgatggcgacagaggagaagactccacagtgaac
ggcggaccaggggctgacggggataacggcaaagacggagctgcaggagctgcaggcctt
ccaggcgcagacggacccgttggacctcctggagatccaggcacagcgggactgaacgga
cccaaaggagatgccgggacccgtgggctcgctggagaacccggcgtcggacccgatggg
ctggatggtattccgggtacagacgggctgccgggcgaactgggaaaagttggaccatct
ggagtgagaggcaagagaggtcaagtgggtctccctggtgctgctgggcctcggggtctt
ccaggcgtgtatcaaggcgaggacctgtgtcccaacgcctgcccctctggtctcaatgga
cattctggtctccccggcatgaaaggccacaaaggaggtaaaggtgaatctggtgagccc
ggaagacaaggacacaagggagaggagggcgaacaaggactgaccggtgaagttggagct
caaggactaccaggtccaggtggatcaagaggcctcgcaggaatatttggctccaaaggt
gaccggggagctcgtggaaaatccggagatggaggtcctcaggggatccagggcggccca
ggcgatttgggtcaaagaggagccataggtgagctcgggccagtgggagtgcagggtgat
cgaggtccatctggaatcagaggagtgccagggccagaaggagatccaggcctcgccggt
ccagacgcccgtgagggaatacccggtctaccaggatccaagggtattacagcgaaaaat
ggggctccaggtgatgccggcccacaaggacttcctggtttgccaggcacttatggccaa
aaaggagtcagtggtgcagtggggagctcaggtgatccaggtgttgtaggactgatgggc
tctccagggaaacaaggcgagcgtggcgagcagggagaggtgggagcgatgggacccaga
ggaggaccgggtggacgaggagagcgaggacctgacgggcctctaggatcaccaggagcc
aggggaggcaaaggggacccaggccttcccggactgcctggccctgctggctatcgtggg
cagaacggcgacaggggtggagtcggtcttgatggtccacagggagaccagggaggtgca
ggtgacgaaggaacagcaggaggtgtcggggagctgggggatcaaggagaactgggagag
aaaggatcgactggcccacctggagagacaggaaataaaggacctgagggcggccgagga
caagagggcaaagagggcaagccgggccaacagggaccgcggggcatgcagggcgacatg
ggggtaccgggcctgccggggtcgcagggaccagcgggaaaattgctcacagatactcac
atcaaacaagtctgcatgagggtaatgcaagagcagctggcccagctagcagcgagcctg
agccggccggagtcgggcatctctgggatccccggaccccccggcccgcctggacctcaa
ggctcctccggagagaacggtttccccggacacaccggatcacgaggactgcccggtctg
aagggtccagctgggctgttgggtcgcaaaggacacaaaggtgaccagggggacagaggg
gacaaaggacccacaacgagaggatccaaaggagcgccaggtgcccccggtctaccaggt
gaacccggtcgaccggcttacggcaaagagggtcgtgaaggtcagcggggaccccgtggt
gtttccggtgcatccggagttcccgggcctcccggtcccgccggcatgaacggttactgt
gagtcgtcacagtgcgtcctgcccatgatggcgtcaccggtttctgcaaaggactccggc
atgaagggccccagtgacatgtga

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