Cottoperca gobio: 115006231
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Entry
115006231 CDS
T07513
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115006231
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115006231
09142 Cell motility
04820 Cytoskeleton in muscle cells
115006231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgob00535
]
115006231
Proteoglycans [BR:
cgob00535
]
Extracellular matrix (ECM) proteoglycans
Others
115006231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115006231
NCBI-ProteinID:
XP_029284210
UniProt:
A0A6J2PF26
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MALSRICRESLLVILLQIVLICSAQRGPVGPRGSQGPLGVAGFPGVDGIDGDRGEDSTVN
GGPGADGDNGKDGAAGAAGLPGADGPVGPPGDPGTAGLNGPKGDAGTRGLAGEPGVGPDG
LDGIPGTDGLPGELGKVGPSGVRGKRGQVGLPGAAGPRGLPGVYQGEDLCPNACPSGLNG
HSGLPGMKGHKGGKGESGEPGRQGHKGEEGEQGLTGEVGAQGLPGPGGSRGLAGIFGSKG
DRGARGKSGDGGPQGIQGGPGDLGQRGAIGELGPVGVQGDRGPSGIRGVPGPEGDPGLAG
PDAREGIPGLPGSKGITAKNGAPGDAGPQGLPGLPGTYGQKGVSGAVGSSGDPGVVGLMG
SPGKQGERGEQGEVGAMGPRGGPGGRGERGPDGPLGSPGARGGKGDPGLPGLPGPAGYRG
QNGDRGGVGLDGPQGDQGGAGDEGTAGGVGELGDQGELGEKGSTGPPGETGNKGPEGGRG
QEGKEGKPGQQGPRGMQGDMGVPGLPGSQGPAGKLLTDTHIKQVCMRVMQEQLAQLAASL
SRPESGISGIPGPPGPPGPQGSSGENGFPGHTGSRGLPGLKGPAGLLGRKGHKGDQGDRG
DKGPTTRGSKGAPGAPGLPGEPGRPAYGKEGREGQRGPRGVSGASGVPGPPGPAGMNGYC
ESSQCVLPMMASPVSAKDSGMKGPSDM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctctctccaggatctgtcgagagtctttgctggtgattttactgcaaatcgtgcta
atttgctcggctcagaggggcccggtcggtcccagaggctcccaggggccgctgggagta
gcaggctttcccggtgtggacggaattgatggcgacagaggagaagactccacagtgaac
ggcggaccaggggctgacggggataacggcaaagacggagctgcaggagctgcaggcctt
ccaggcgcagacggacccgttggacctcctggagatccaggcacagcgggactgaacgga
cccaaaggagatgccgggacccgtgggctcgctggagaacccggcgtcggacccgatggg
ctggatggtattccgggtacagacgggctgccgggcgaactgggaaaagttggaccatct
ggagtgagaggcaagagaggtcaagtgggtctccctggtgctgctgggcctcggggtctt
ccaggcgtgtatcaaggcgaggacctgtgtcccaacgcctgcccctctggtctcaatgga
cattctggtctccccggcatgaaaggccacaaaggaggtaaaggtgaatctggtgagccc
ggaagacaaggacacaagggagaggagggcgaacaaggactgaccggtgaagttggagct
caaggactaccaggtccaggtggatcaagaggcctcgcaggaatatttggctccaaaggt
gaccggggagctcgtggaaaatccggagatggaggtcctcaggggatccagggcggccca
ggcgatttgggtcaaagaggagccataggtgagctcgggccagtgggagtgcagggtgat
cgaggtccatctggaatcagaggagtgccagggccagaaggagatccaggcctcgccggt
ccagacgcccgtgagggaatacccggtctaccaggatccaagggtattacagcgaaaaat
ggggctccaggtgatgccggcccacaaggacttcctggtttgccaggcacttatggccaa
aaaggagtcagtggtgcagtggggagctcaggtgatccaggtgttgtaggactgatgggc
tctccagggaaacaaggcgagcgtggcgagcagggagaggtgggagcgatgggacccaga
ggaggaccgggtggacgaggagagcgaggacctgacgggcctctaggatcaccaggagcc
aggggaggcaaaggggacccaggccttcccggactgcctggccctgctggctatcgtggg
cagaacggcgacaggggtggagtcggtcttgatggtccacagggagaccagggaggtgca
ggtgacgaaggaacagcaggaggtgtcggggagctgggggatcaaggagaactgggagag
aaaggatcgactggcccacctggagagacaggaaataaaggacctgagggcggccgagga
caagagggcaaagagggcaagccgggccaacagggaccgcggggcatgcagggcgacatg
ggggtaccgggcctgccggggtcgcagggaccagcgggaaaattgctcacagatactcac
atcaaacaagtctgcatgagggtaatgcaagagcagctggcccagctagcagcgagcctg
agccggccggagtcgggcatctctgggatccccggaccccccggcccgcctggacctcaa
ggctcctccggagagaacggtttccccggacacaccggatcacgaggactgcccggtctg
aagggtccagctgggctgttgggtcgcaaaggacacaaaggtgaccagggggacagaggg
gacaaaggacccacaacgagaggatccaaaggagcgccaggtgcccccggtctaccaggt
gaacccggtcgaccggcttacggcaaagagggtcgtgaaggtcagcggggaccccgtggt
gtttccggtgcatccggagttcccgggcctcccggtcccgccggcatgaacggttactgt
gagtcgtcacagtgcgtcctgcccatgatggcgtcaccggtttctgcaaaggactccggc
atgaagggccccagtgacatgtga
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