KEGG   Cottoperca gobio: 115006567
Entry
115006567         CDS       T07513                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4B-like
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
cgob  Cottoperca gobio
Pathway
cgob03250  Viral life cycle - HIV-1
cgob03272  Virion - Hepatitis viruses
cgob04144  Endocytosis
cgob04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115006567
   03272 Virion - Hepatitis viruses
    115006567
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115006567
  09143 Cell growth and death
   04217 Necroptosis
    115006567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgob04131]
    115006567
   03400 DNA repair and recombination proteins [BR:cgob03400]
    115006567
Membrane trafficking [BR:cgob04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    115006567
DNA repair and recombination proteins [BR:cgob03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    115006567
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_5 AAA_14 RuvB_N AAA_22 IstB_IS21 DUF815 AAA_18 AAA_2 NPHP3_N nSTAND3 AAA_33 RNA_helicase nSTAND_NTPase5 PhoH AAA_24 AAA_28 AAA_17 Mg_chelatase AAA_7 Parvo_NS1 NACHT ResIII bpMoxR Sigma54_activat MCM
Other DBs
NCBI-GeneID: 115006567
NCBI-ProteinID: XP_029284694
Ensembl: ENSCGOG00000024407
UniProt: A0A6J2PH66
LinkDB
Position
4:20999272..21004900
AA seq 435 aa
MAGGNLQKAIDLASKAAAEDKAKNYEEALKLYQNSVQYFLHVVKYESQGDRAAQSIRAKC
VEYLDRAEKLKEYLKKKEKAPPAKPVKESDDKGDESGDGDDAEKKKFKDQLSGAIVMEKP
NIKWDDVAGLEGAKEALKEAVILPIKFPHLFKGKRTPWRGILLFGPPGTGKSYLAKAVAT
EANNSTFFSISSSDLVSKWLGESEKLVKNLFTLAREHKPSIIFIDEIDSLCGSRSETESE
AARRIKTEFLVQMQGVGNDNEGILVLGATNIPWTLDSAIRRRFEKRIYIPLPEEHARSFM
FKLHLGSTPNNMTEPDFITLGKKTEGYSGADISVIVRDALMQPVREVQSTTHFKKVKGSS
WKDPDIVVEDLLTPCSPDDPNAIEMTWMDVPGEKLLEPVVSMPYMLKSLTNTKPTVNDQD
LDKLKKFTEDFGQEG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggctggtggtaatttacagaaagctatagatctcgccagcaaagctgcagcggaggac
aaagctaaaaactacgaagaggccctcaaattgtaccagaattcagtgcaatacttcctc
catgttgtcaagtatgagtcccagggggatcgggcggcgcagagcatcagagccaagtgt
gtcgaatacctggacagagccgagaagctgaaggaatatctgaagaagaaggagaaggct
cctccggccaaacccgtcaaagagtctgatgacaaaggggatgaaagtggtgacggggat
gacgctgagaaaaagaagttcaaagatcaactctcaggtgccattgtcatggaaaagcct
aacattaagtgggacgatgtagccggactcgagggggccaaagaagccttaaaagaagcc
gtgatcctgcccattaaattccctcatctgttcaaaggaaagcgaactccttggaggggg
atccttctgtttggccctccaggaacagggaaatcctacctggcaaaggcggtggccacg
gaagccaacaactccaccttcttctccatctcctcctccgacctcgtgtccaagtggttg
ggtgaaagtgaaaagttggtgaagaacttgttcactttagcccgagaacacaagccatcg
atcattttcatcgacgagatcgactctctctgcggctccaggagcgagaccgagagtgaa
gcggcgcgtaggatcaagacagagttcctcgtccagatgcaaggtgttggaaatgataat
gagggaatcctggtcctgggagccacaaacatcccatggacattggactcggcaatcagg
agaaggtttgaaaagcgaatctacattcctctgccagaggagcacgctcgctccttcatg
ttcaaactgcatcttggctccacccccaacaacatgacggagccggacttcatcactctg
ggcaaaaagacagagggatactctggggcggacatcagtgttatcgttagggacgccctc
atgcagcctgttcgggaggttcagtcaaccactcacttcaaaaaggttaaggggtcatca
tggaaagatcccgacattgtggtggaagacctcctgactccgtgttcaccggatgatccc
aacgccatagagatgacgtggatggacgttcctggggagaaactgctagagccagtcgtg
tccatgccgtacatgctgaagtcgctgacaaacaccaagccgaccgtgaatgatcaggac
ttggataagctgaagaagttcaccgaggattttggtcaagaaggctaa

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