Cottoperca gobio: 115006742
Help
Entry
115006742 CDS
T07513
Symbol
pdgfra
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04010
MAPK signaling pathway
cgob04020
Calcium signaling pathway
cgob04144
Endocytosis
cgob04510
Focal adhesion
cgob04540
Gap junction
cgob04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115006742 (pdgfra)
04020 Calcium signaling pathway
115006742 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115006742 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
115006742 (pdgfra)
04540 Gap junction
115006742 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115006742 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgob01001
]
115006742 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgob04090
]
115006742 (pdgfra)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115006742 (pdgfra)
Protein kinases [BR:
cgob01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115006742 (pdgfra)
CD molecules [BR:
cgob04090
]
Proteins
115006742 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Kinase-like
VWA_3
Motif
Other DBs
NCBI-GeneID:
115006742
NCBI-ProteinID:
XP_029285044
UniProt:
A0A6J2PI60
LinkDB
All DBs
Position
4:20603911..20621131
Genome browser
AA seq
1468 aa
AA seq
DB search
MDGVKAYLVFGGILVVLVSVTSGLSPPTIVSNEEEFILQPNSVFNISCTGKRNVIWAEPL
PKNTFVYPGYYTATLFIYNATVENTGYYMCTYETQEGDQESEPEEDNEAGIYVFVPDLQN
LFVPETPDNLVVAMDTLGVPISCRVSDPYSQVTLRSVPSGKEMPAYYDNKMGFFGSLFPG
QYQCETIMNGHAIRSVIYTVETEAPAEIEDFDVEVKASGETVRAGQPFNVTCVSPIGLGF
LQQWLHPKKQAIDAVQMKETLPDRVIYTLSIPQATSQDSGMYECSITHQISREVRVSSVA
VTVFEESSFLALDHSGILGTEFVSLLEETEYTILIDAYPTPKVMWLKDSKSMPQNYYVHT
KTSHLEGNRYQSILTLRQPLVKDNGNYTISALSGSRTAQFSFTLKVKAPTAMMFPPSSAP
VLLPQVEEMVVPLHTPFTLTCRGEAKLAWETPLDVYEQTQEDNSGLFVTTITVDNATAMH
TGDYTCFYSRNMTEDAEDSSIYIYVPDPAVPFVPSPVPFGNHVLSDHEEMEIQCRVSDPS
ANVTLVNVDTQQPVPSFYDSKRGALGVFTAGTYVCKALINGEEHYSGEYIVHGWTGGAAL
HVELTAKRTALLVGDTITITCLAQGSEILEDHWKYPGKLANRAIKTVHENKKAQEILYTL
TIPQASTKDNGIYSCSITDIMSNESQTKELAVRVFASEFMFVWPEFREYESAELDEVREF
RAEISSFPGAHVTWLKDGIPLNDVTAEISTSLRQFSETSYMSVLTLIRAKEEDSGNYTMR
VENGDHSRDVGLILEVKVPAVIVDLMDIHHGSATGQSVVCITRGQPTPVVEWFICKNMKH
CANDSSSWVSLPANSTDITMDSHFDEDSNLESHVMFGHLESTLAVRCLAKNEMAMVSREV
KLVSNGPHPELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIY
VDPMQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR
SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNHLHKNRENFL
TLEPEKSKKELDIFGINPTDESSRSYVILSFESKGDYMDMKQSDNTQYVPMLEMSNGSKY
SDIQRSDYDQPPSPKEGEMDDLLPNDMNEGLTTTDLLSFTYQVAKGMEFLSSKNCVHRDL
AARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTTLSDVW
SYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPDDVYEMMMKCWNSEQEK
RPTFLGLSESVSSLLPSSYKRHYEKVNHEFLKSDHPAVTRVCVENDDAYIGITYKNQGKL
KDRESGFDEQRLSSDSGYIIPLPDLDPISDDEYGKRNRHGSETSEESAIETGSSTSTFAK
REGETLEDITLLDEMCLDCSDLGEDSFL
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtaaaggcgtatctcgtctttgggggcatcctggtggtgctggtttcagtt
acttccggattgtcgccacctaccatcgtgtccaacgaagaagagttcatcctgcagccc
aattccgtgtttaacataagctgtaccggtaaaagaaacgtcatttgggctgaacccctg
ccgaaaaacacctttgtttacccgggatactacacggcgacacttttcatctacaacgca
actgtagaaaacaccggctattacatgtgcacctatgaaacacaggagggtgaccaggag
agcgaaccggaagaagacaatgaggcgggaatatatgtgtttgtcccagatcttcagaat
ctatttgtcccagagacccctgataacttggtcgtcgcaatggacacacttggggtcccc
atctcctgccgtgtgtctgacccctactctcaagtcaccctgaggagtgtcccgagtgga
aaggagatgcctgcctactacgacaacaaaatgggtttctttggaagcctctttcctggg
cagtaccagtgtgaaaccataatgaacggccatgcgatcagaagtgtcatttacactgtg
gaaactgaggcccccgcggagatagaggatttcgacgtggaagtaaaagccagtggggag
acggtgagagcagggcagccttttaacgtcacgtgtgtctctcccattggactgggcttt
ctacagcagtggctccatcctaaaaaacaggctatagatgcagttcagatgaaagagact
cttcctgaccgggtcatctacaccctcagtatcccacaagctacctctcaggacagcggc
atgtacgagtgctccatcacacaccaaatcagcagagaggtcagagtcagcagcgtggct
gtcaccgtcttcgaggagagttcttttttggcactggaccacagcgggattctaggtacg
gagtttgtcagccttctagaggagacggagtacaccatcctcatcgatgcctacccgacc
cccaaagtgatgtggctgaaagacagcaaatctatgccccagaactactacgtccacacc
aaaaccagccacctcgaaggaaatcggtatcaaagcattctgacattacggcagcctctc
gtgaaagacaacgggaattataccatctcagccctcagtggctctcgcactgctcagttc
tcattcaccctcaaagtgaaagcccccaccgcaatgatgttcccaccatcctcagcccct
gtgctgctgccacaggtggaggagatggtggtgcccctccacactcctttcaccttgacc
tgtcggggagaggcaaaactagcctgggagaccccgctcgatgtgtacgagcaaacgcag
gaggacaacagcggcctgtttgtcaccaccatcactgtggacaacgccaccgcaatgcac
accggcgactacacgtgtttctacagcaggaatatgacggaggatgcagaggacagcagc
atctacatctatgtgccagatccagctgttccctttgtgccatcaccggtgccttttggc
aaccatgtcctgtccgaccatgaggagatggagatccagtgtcgagtgtctgatcccagt
gctaacgtgaccctggttaacgtcgacacccagcagcctgtgcctagtttttatgacagc
aagaggggcgctttgggagtattcaccgctggaacctacgtctgtaaggctctcataaac
ggagaggaacactacagcggggaatatatcgtccatggctggacaggtggcgctgcgctg
catgttgagctgacggctaaaaggactgctctgctggtgggagacaccatcacaatcacc
tgtctggctcagggatctgagattctggaagaccactggaaataccctggcaagctggca
aatcgtgctatcaaaacagtgcatgaaaataagaaggctcaggagatcctttacaccctg
acgatcccgcaggcctcaacaaaagacaacggcatctactcctgctccatcactgatatc
atgagtaatgagagccagacaaaggaactagctgttcgagtttttgcaagtgagtttatg
ttcgtctggccggagttcagagaatatgaatccgcagagctggatgaggtccgggagttc
agggcggaaatcagctctttccccggtgctcatgtcacctggctcaaagacggcatccca
ctcaacgacgtgacagcggagatctccaccagcctccggcagtttagcgaaaccagctac
atgagcgttcttaccctgatccgggccaaggaggaggacagcgggaactacaccatgcga
gtggaaaatggagaccatagtcgtgacgtcggattaatcctggaggtcaaagtgcctgca
gtcattgtggacctgatggacatccaccatggctcagccacaggccagtctgtcgtgtgc
attaccagagggcagcccacccctgtggtggagtggttcatctgcaagaacatgaaacat
tgtgccaatgactcgtcctcctgggtgtcactgcccgccaactccacagatatcacaatg
gattcacacttcgacgaggacagtaacctggagagccatgtcatgtttggtcatctggaa
agcacactggcggtgcgctgcttggccaagaacgaaatggccatggtcagcagggaggtc
aaactggtgtctaatggccctcacccagagctgactgtagctgctgctgtgctggtgctc
ctggtcattgtcatcatctcactcattgtcttggttattatctggaaacagaaaccacgg
tatgagatccgctggagggtcatagagtctgtgagcccagacggccatgagtacatctat
gtggatcccatgcagcttccctacgactccagatgggagtttccccgtgacagacttgtg
ctcggtcgtatcctgggctctggagcctttgggaaggtggtagagggcactgcttatgga
ctcagccgctcccaacctgtcatgaaggtggcagtgaagatgctgaaacccacagcacgg
tccagtgagaaacaggccctgatgtcggaactgaagatcatgactcatcttggaccacat
ctcaacattgttaacctcctgggagcatgcaccaagtcaggccccatctacattatcact
gaatactgcttctacggggacctggtcaaccacctgcacaagaacagggagaacttcctc
acccttgaaccagagaaaagcaaaaaagagctggatatctttggaatcaaccccacagat
gagagcagcaggagttatgtgatcctgtccttcgagagcaaaggagactacatggatatg
aagcagagtgacaacactcagtatgttcccatgctggagatgagcaatggctccaagtac
tcagacatccagaggtctgactatgaccagccaccctctccgaaagagggcgagatggac
gacctgctgccaaacgacatgaacgaaggcctcaccaccaccgatctactcagttttacc
taccaggtggccaaaggcatggagtttctgtcttccaaaaattgtgtgcatcgggacctc
gcggccaggaatgtcctcctctctcagggcaagatagtgaagatctgtgacttcggactg
gcccgagacatcatgcatgacaacaactatgtctccaaagggagtacttttctcccagtg
aagtggatggcaccagagagtattttcgacaacatgtacaccactctcagtgatgtttgg
tcgtacggcatcctcctctgggagatattctccttaggtggcaccccatacccaggcatg
gtcgtggattcaagcttctacaacaagatcaagagtggatacaggatgtccaaaccagaa
catgcacctgatgacgtgtatgagatgatgatgaagtgctggaacagcgaacaggagaag
aggcctactttcctgggtctgagtgaatccgtatcttctttgctgccctccagctacaag
agacattatgagaaggtgaaccatgagttcctgaagagcgaccaccccgctgtgactcgg
gtgtgcgtggaaaacgacgacgcctacatcggtatcacctacaagaaccagggcaagctg
aaggacagggaaagtggctttgatgagcagcggttgagctctgacagcggctacattatt
cccctgcccgacctggaccctatatctgacgatgaatatggaaagaggaacagacacggc
tctgagacctccgaggagagcgccattgagacgggctccagcacctctacttttgctaag
cgcgagggtgagactctggaggatatcacgctgctggacgagatgtgtctggactgtagt
gacctgggggaggacagcttcctgtga
DBGET
integrated database retrieval system
