Cottoperca gobio: 115006755
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Entry
115006755 CDS
T07513
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cgob
Cottoperca gobio
Pathway
cgob03320
PPAR signaling pathway
cgob04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115006755
03320 PPAR signaling pathway
115006755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115006755
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgob03310
]
115006755
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115006755
Nuclear receptors [BR:
cgob03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115006755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
115006755
NCBI-ProteinID:
XP_029285065
Ensembl:
ENSCGOG00000001047
UniProt:
A0A6J2PHJ8
LinkDB
All DBs
Position
4:25059525..25088364
Genome browser
AA seq
464 aa
AA seq
DB search
MWHPMASPSTGGSPGREIGYCHYSTGPMTHTHPSPMVGHPSVISSSRPLPSPMSSMGSPM
NGLASPYPVITSSLGSPSISLSSTPNMNFGPLGSPQMNSMNSVSSSEDIKPPPGLQNLGN
INYQCTSPGGMSKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDMKECLI
DKRQRNRCQYCRYQKCLAMGMKREGVCAAVQEERQRGRERGESEVESTSSFNEEMPVDKI
LDAEVAVEPKTETYIEGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQV
ILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRNSAHSAGVGSIFDRVLTELVSKMK
DMQMDKTELGCLRAIVLFNPDAKGLSNPAEVEGLREKVYASLESYTKQKYPDQPGRFAKL
LLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccccatggcatcaccttcaactggaggcagccccggaagggagataggttat
tgccactactctacggggccaatgacccacacccatccttctcccatggtcggccacccg
tcagtcatcagcagctccaggcccttaccgtccccaatgtccagcatgggctcgccaatg
aacggcctggcctcgccctaccccgtcattacatcttctctgggctcgccctcgatatcg
ttgtcgtccacgcccaacatgaactttggaccgctcggcagtccacagatgaactctatg
aacagtgttagcagctcggaggacatcaagcctccaccaggcctacagaacctgggaaac
atcaactaccagtgtacgagccccgggggaatgtcaaagcacatctgctccatttgcggg
gaccgctcgtcaggaaagcactacggcgtgtacagctgcgagggctgcaaaggcttcttc
aagaggaccgtccgtaaagatctcacctacacgtgtcgagacatgaaggagtgcctgatt
gacaagcgccagcgaaaccgctgccaatactgtcgctaccagaagtgcctggccatgggc
atgaagagagaaggtgtgtgtgcagcggtgcaggaagagaggcagcgtggacgggagcgg
ggggagagtgaggtggagtctaccagcagtttcaacgaggagatgcccgtggacaagatc
ctggatgctgaggtggctgtcgagcccaagacagagacgtacatcgaaggcagccccagc
aactcaacgaacgaccccgtcaccaatatctgccaagcagccgacaagcagctcttcacc
ttggtggagtgggccaaaaggatcccgcacttctctgaactccctctcgatgaccaggtc
atcctactacgagcaggctggaacgagcttcttatcgcctcattctcgcatcgctcagtc
acggtgaaagatggcatcctgttggcgaccggcctgcacgtccacagaaacagcgcccac
agtgctggagtgggctccatctttgatagagtcctgactgagctggtatccaaaatgaaa
gatatgcagatggataagacagagcttggctgcctgcgagccatcgtcctcttcaaccca
gacgcaaaaggtctttcaaacccagcagaggtcgaggggctgagggaaaaggtttacgcc
tcattggagtcgtacacgaaacagaaatacccggatcagcctggcaggtttgccaaactt
ctgctccgcctgcccgccctgcgctccatcggcctcaagtgtctggagcatctgttcttc
ttcaagctgatcggggacacgcctatcgacaccttcctgatggagatgctggaggcgccg
catcagatcacatga
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