Cottoperca gobio: 115006810
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Entry
115006810 CDS
T07513
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgob01002
]
115006810 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115006810 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115006810 (usp13)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115006810 (usp13)
Peptidases and inhibitors [BR:
cgob01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115006810 (usp13)
Ubiquitin system [BR:
cgob04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115006810 (usp13)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115006810 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
UBA_9
Motif
Other DBs
NCBI-GeneID:
115006810
NCBI-ProteinID:
XP_029285197
Ensembl:
ENSCGOG00000022371
UniProt:
A0A6J2PJ86
LinkDB
All DBs
Position
4:19975470..20006308
Genome browser
AA seq
862 aa
AA seq
DB search
MAADLGELLVPYMPTVRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAAGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNSPSAYKKQEPDSWEEEIQVSKHARSLRQLD
NEVRIPPRGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALDHFKETKYPLAVK
MDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLTQTKTENGHHTDNNSRPRVSEWE
VIQESGMKLKAVFGSGYTGIKNLGNSCYLGTVMQVLFSIPDFQRMYVGNLQKIYDYSPLD
PSQDFATQMAKLGHGLLSGQFSKPPMKSELIEQVMKEEYKVLNWHQQKGVSPRMLKAMVS
RGHPEFSSIRQQDAHEFLLHVINVVERNSAGSENPSDVFRFLVEERVQCCQTRQVRYNQR
VDYCIQLPAPFEAATNREELLAYEAKRKDAEENMRAPPEPVRARIPFTACLQAFTEPDNV
PDFWSSALQAKSAGVKTSRFASFPEYLILQIKKFTFGDDWVPKKLDLAIDVPDFLDLSRL
RATGLQASEEELPDLLPPIVLAEDTRDNSMGSIDSPEIDEAAVMQLAEMGFPLEACRKAV
YYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSIMDPGPSTSDSTVGATPLGNSPPEESIA
ILTSMGFPRAHSIQALKATNNNLERALDWIFTHPEEEESDALSDMADTEPNDNAFSNANS
HSNSTLSPDRDVSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHKV
CLSERPPKDLGYIYFYHRLSSS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccatacatgcccaccgtcagggtgcccaga
acaggagacagggttttcaagagcgagtgcgccttttccttcgactctcccgagtcagag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgtcaaagagaaa
gccacaggagctgcagcaggcgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagcttaaccgtgattttaacggagaggactatgaatatgaagacgaggccaagctt
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccatagcctgtgacgctgtgctcaactcaccatcagcttacaaaaagcaggagcct
gattcctgggaggaggagatccaggtgtccaaacatgccaggagcctcagacagctggat
aatgaggtcaggatcccacccaggggctggaagtgtcagaagtgcgagatgagagaaaac
ctgtggctgaacctgacagatggagcagtgctctgtgggaaatggttctttgatgggagc
ggaggcaacggccacgctctggatcactttaaagagaccaaataccccctggctgtcaag
atggacactatcaccccagacggagcagatgtctactcatttgaagaggaggaggctgtg
ttagacccccacatatcagaacacttgtcacactttggaatagacatgctgacgcagaca
aaaacggagaatggtcaccacacggacaataactcccggccgcgggtcagtgaatgggag
gtgatccaggagtcgggcatgaagctgaaagcggtgtttggttctggttacacaggcatc
aaaaacctgggcaacagctgctacctgggcacagtgatgcaggtgctcttcagcatccca
gacttccagaggatgtatgtgggtaatcttcagaagatatatgactattcaccccttgac
cccagccaggacttcgcaacacaaatggctaaactgggacatggactgctctcaggccag
ttctccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaatacaag
gtattaaactggcaccagcagaagggcgtctctccccgtatgttgaaggccatggtgagc
aggggacacccagagttttcctctatcagacaacaagacgcccacgagttcctcctgcac
gtcatcaacgtggtggagaggaacagcgcaggttcagagaatccaagcgacgtcttccgc
ttcctggtggaggagcgagttcagtgctgccagacacgtcaagttcgttacaatcagcgg
gtggactactgcatccagctaccagctccctttgaagcggccaccaatcgagaggagctg
ctggcatacgaagccaagcggaaggacgctgaggagaacatgcgagctcctcctgagccg
gtcagagcacggatccccttcaccgcctgcctgcaggccttcacagagccggacaacgtc
cccgacttctggagctcagcgctacaggccaagtccgccggagtcaaaacttcccgtttc
gcctccttcccagagtatctgattttgcagatcaagaaattcacattcggggatgactgg
gtgccgaagaaactagacttggccatagatgttccagactttctggatttgagtcggctg
cgggccaccgggctgcaggcgagtgaagaggagctgccggacctcttgcctcccatcgtg
ctagctgaagacaccagagataactctatgggctccatagactctccagaaatagatgag
gcggcagtaatgcagctggcagagatgggctttccgctggaggcctgtaggaaggcagtc
tactacacaggcaacatgggccccgagatggctttcaactggatcatagcccacatggag
gagcctgactttgcagaacctctcactcttccctccataatggatcctggtccctccacc
agcgacagcaccgtgggcgccaccccgctgggcaactcgccccctgaggagagcattgcc
atcctcacttcaatgggcttcccccgcgctcacagcatccaggcactcaaagccacgaac
aataacctcgaacgagccctcgactggatcttcacccacccggaagaggaggagagtgac
gccctgtcagatatggctgacacggagcccaacgacaacgctttctccaacgccaactca
cacagcaactccacgctgtccccagacagagacgtgtcgggcccacgggtcaaagacgga
ccgggacgttatgagctctttgctttcatcagtcacatgggagcatccacaatgtctgga
cattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaacgaccacaaagtg
tgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcgactgtct
agcagttaa
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