Cottoperca gobio: 115006861
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Entry
115006861 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgob
Cottoperca gobio
Pathway
cgob02010
ABC transporters
cgob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115006861
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115006861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgob02000
]
115006861
Transporters [BR:
cgob02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115006861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
115006861
NCBI-ProteinID:
XP_029285305
Ensembl:
ENSCGOG00000002941
UniProt:
A0A6J2PI76
LinkDB
All DBs
Position
4:complement(15945473..15976789)
Genome browser
AA seq
2380 aa
AA seq
DB search
MGFFRQLALLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQGQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETTGQVGNFDNSILSRLFVDAQTVLSYSGNQT
FLGFQDLMDNVRRLGERPGAWPNLPVEEYLRANETFSTFLLTNGSLSPVTVDQLLKARLN
FQVAVAGSQMQLKDLVCNASMLGQFLVVDGGETNMTDLQTQLCNLSADVLLEAERLFLSQ
LDFSKFFTRERLMANAGDLRVISQAVTSVSHELSVLIDEFSSLSSFADMSAALRLLSPEN
RSALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTDMDHDNNTTP
LCKRFIQGLESNPLSRIMWRGIKPLFIGKLLYTPDTPAVQEVMKEVNKTFEDLQILQELN
EAWMEVGPRIKTYMENSVEIQLLQDLLRRPEVAVLVNLRLENTSWTASRVAHFLSTPSPD
APSRPGAPPTWLDVYNDLDHTITTLAQATECFTLNKMEGLDTEAQMIDRALELLEDRLFW
AGVVFLLPNSSSPDLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVNRILTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMKIMGLGTGTLWLSWFISSIVPFLLSAGFLIALLKWGDILPYS
DPSVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
TYRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDSYSFTTSIVMLYVDAF
IYATAAWYIEAVFPGEYGMPRPWYFIFQINYWGGVPLEAGMPIPPAPSEQGEDHIESEPN
NLNLGVNIRNLVKIYKKGAKLAVNHLNLKFYEGQVTSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIRGLDIRHDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVKAELD
TLLEDVGLLHKRREQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTVVKRE
GLDTSTPSSTSICTSTSTSISTNKLPPLKDSESSMSEDTGLGSEESSSYLAALLSLAQHH
IPGARLVEESGREAVINLPQTAAKDSSLAVFLSELDLRQTELGVSSYGLSDSTLEEIFLR
VAEETGVDAEPELQAESPHRQEPSAGQSAEEQHAREPETEPQETDLLNGNGRGGIPLTGW
WLTWQQLRALFIKRWLYARRSRRGFFAQVVLPAVFVLIALLFSLIVPPFGKYPKLQLQPW
MYGEQYTFFSNDAPGNPAMEHLLKALLDLPGFGTKCMEKEEEENSTSPQCESERGGRFTR
PQLFHSTWKLLNKANWSRETPSPDCQCSTEDVSRMLPDCPLGAGGLPPPQIKRLTGDILQ
NLTSYNISDYLVKTYSQILKKSIKTKKWVNEFRYGGFSLGGSATQTLSQVHHVKDSIIAI
RTRYRVPQNSSLDHLLNRLPDFLGGLNSQNNVKVWYNNKGWHSMVSFVNVMNNGLLRASL
PPGPDRRKHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFVLFLIE
ERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLPAL
VLLLLFYGWSITPLMYPASFMFTVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNE
VNRILKKVFLIFPHFCLGRGLIDMAKNQAMSDAFQRLGTKQTLDPLQWDFVGKNLFAMAA
EGVIFFIFTILLQYKFFIRFRPWWVEPEIPPLGPEDEDVARERERVISGKAQSDILTMID
LSKVYKAGKMPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTDITYGEAFLNHHS
VMTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVSEESVAKVAEWGVKKLGLIQ
YAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRA
VVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLLDPKSNPDSCP
VSTYMKSSFPSIELKERHQSVLQYQLPSHACCLARVFEVLANNYEELGIIDFSVSQTTLD
QVFVNFAKEQTDDEVFLNVVISNRTVQINMSSQRTGVNPLSIQPQLPITHPQPSKTPQQH
EKSPASKPNEGKSKKPKAGKVNSKEGKANGEKSSSTAMTRIPQREEKAERTSRRSSRGSD
SSNGGVHGETSQSSKHRAESSSKDPSALFIVDSNTQDSAL
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttccgacagcttgccctcctgctctggaagaacatcacataccgcaggagg
aacaagatccagctgatcatcgagctcctctggccgctcttcctcttcgtcatcctcatc
tctgttcgtcattcacaccctccctacaaacagggccaatgtcattttccaaacaaagcc
ttgccatcagcaggcaccttgccctggatccagggcattatctgcaacatcaacaacccc
tgcttccacagcccaacaccaggggagacaacgggccaagttggcaactttgacaactcc
atactgtcccgtctcttcgtggacgcccagactgttctgtcctacagtggaaaccagaca
ttcttgggttttcaggacctgatggacaatgtccgaaggctgggagagagacctggagcc
tggccaaatctcccggtagaagaatacctgagagccaatgagacgttctctaccttcctt
ctgaccaatggcagcctgtcgcctgtgactgtggaccaactgctgaaggctcgtctcaat
tttcaggttgctgtggctggatctcagatgcagctaaaggacttggtgtgtaatgcgagc
atgttgggacagtttctggtggtagacggaggagaaaccaatatgactgatcttcagact
cagctgtgtaacctgtcagctgacgtcctgctggaggctgaacgccttttcctctctcag
ctcgacttttccaagttcttcacaagagaacgtctgatggctaacgctggagacctcagg
gtcatcagtcaggctgtcacctccgtttcccacgagctgtctgtcctcatcgatgagttc
tcctctctctccagttttgcggacatgagcgcagctcttcgtcttctgtctccagagaat
cgctcagcgttgcccagggagagttttcgtgctttttccaggatcatgtgcggtcaccct
gaggtgggcggtgagcgcatcccatctctcaactggtatgaggacaatgacatcaagtcc
ttcttaggaaaaaatggcacagaagacacagacatggaccatgacaacaacaccactcca
ttatgtaaacgtttcatccaaggtctggagtccaaccctctgtctcgcatcatgtggaga
ggaataaaacctctttttattggaaaactgctgtacacaccagatactcctgcagtacaa
gaagtcatgaaagaggtgaacaagactttcgaggacctgcagatccttcaggagctgaat
gaagcctggatggaagtgggaccacgaatcaagacttacatggagaacagtgtggagatt
cagctgctgcaggatttgttgaggcggccagaggtcgcagtactggtcaacctgcgtctg
gagaacacttcctggacagcgtcgcgggtcgcacacttcctgtccacaccctcgccagac
gccccaagtaggcccggtgcaccgcctacatggctggacgtctacaacgacctcgaccac
accatcaccacgctagcacaagccactgagtgtttcactctaaacaagatggaggggtta
gataccgaggctcagatgattgacagagcattagagctactggaggacaggctgttttgg
gcaggtgttgttttcctgctgcccaactcctcgtcccctgacctgccgccccacgtcact
tacaaaatccgtatggacattgatgatgtgacccggaccaacaagatcaaggacaggttt
tgggatcctggtccagcagccgacccatttaacgacatgcgctacatttggggcggcttc
gtgtacgtccaggacctggtggagagagctgtgaaccgcattctgaccggagttcaacaa
acaaccggcatctacatccagcagatgccctacccgtgctatgtcgatgatgttttcctt
cgagtgctgaaccgctctctgccactcttcatgacactggcctggatctactcggtggcc
atgatcatcaaaggcgtggtgtacgagaaggaggcaaggctgaaggaaacgatgaagatt
atgggtctgggaacgggaacgctctggctcagctggttcatcagcagcatagttcctttc
ctgctctctgcagggttcctgattgctctgctcaagtggggagacatcctgccatacagc
gacccatccgttgtgtttttcttcctgacggcgtttgcgaccgccaccatcatgcagtgt
ttcctcatcagtaccttcttctctaaagccaacctggctgctgcgtgtggagggctgatc
tactttgggctttatctaccgtacgtactgtgtgtagcctggagagaccgcctcaatacc
acctacagagtcctcgctagtttcctgtcccctgtggcctttggctttggctgcgagtat
ttctctcagtatgaagagcaaggcgtgggcatccagtggtacaacctccactccagccct
gtggaaggagactcgtacagcttcactacctctatagtcatgctttatgtggacgccttc
atctatgccaccgcagcctggtacatcgaagcagtatttcctggtgaatatgggatgccc
aggccctggtacttcatcttccagatcaactattggggtggagttcccctggaggcaggc
atgccaatcccccccgcaccttcagaacagggtgaagatcacattgaatcagaaccgaat
aacctgaaccttggtgtgaacatcagaaacctggtgaaaatctataagaagggagccaaa
ctggccgtcaatcacctcaacctaaagttctacgaggggcaggtcacttctttcctcggc
cacaacggagccggcaaaaccaccaccatatctgtcctgactggcctgttcccacccacc
tcgggaactgtgtacatcagggggctggacatccgccatgacatggacatcatccggagg
acactgggagtttgtccccaacataatgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatgggtgtctgaagggtttatctgaagcagaggtgaaagctgagctggac
actctgctggaagacgtcggcctgctgcacaaacgacgtgaacagaccaaaaacctctct
ggtggcatgcagaggaagctgtctgtggcgattgcgtttgtcggaggctctaaggtggtt
gttctggatgaacccacagctggggttgatccttactcccgcagagggatctgggatctg
ctgctcaaatatcgtaaagaccggaccattatcctgtccacgcactacatggacgaggca
gagctgctaggtgaccggatcgccatcatctcccaggggaagctgtgctgttgtggctca
ccgctcttcctgaaatcccgccttgggtctggctactacctcactgtggtgaagagggag
ggactcgacaccagcactcccagcagtactagtatctgcaccagtaccagtaccagcatc
agcaccaacaagctgcctcctctcaaggacagtgaatcatccatgagtgaagacaccggc
ctgggaagtgaggagagcagctcatacctggcggcgttgctctccctggcacagcaccac
atccctggtgcaaggctggtggaggagtcggggcgggaggcggtgatcaaccttccgcag
acagctgccaaggacagcagcctggctgtcttcctgtctgaactggatctgaggcagacc
gagctgggcgtcagcagctacggcttgtcagacagcacactggaggagatctttttgcga
gtggcggaagaaaccggtgtggatgctgaaccagagctgcaggctgaatctccacacagg
caggagccatcagccgggcaaagtgctgaggaacaacatgctcgagaaccagagacagaa
cctcaagagacagacctgctaaatggaaatggccgaggtgggatcccactgacgggctgg
tggctgacctggcagcagctgagggctcttttcatcaaacgctggctttatgctcgaagg
agccgcaggggcttctttgctcaggttgtcctgcctgctgtgttcgtgctgatcgctctg
ctcttcagcctcatcgttcctccgtttggaaagtatcccaagctgcagctgcagccctgg
atgtacggagaacaatacaccttcttcagcaatgatgcacctgggaacccggccatggag
cacctgctgaaagctctgcttgacctgccaggttttggtaccaagtgcatggagaaagag
gaggaagagaacagcacgagtcctcagtgtgaaagtgagcgggggggccggttcacacga
ccacagttgtttcattccacctggaaattgttaaacaaagctaactggagcagagaaacg
ccatctcctgattgtcagtgtagcacagaggatgtcagccggatgctccccgactgcccg
ctgggtgcaggtggactgccgcctccacagattaagaggctgactggagatatccttcaa
aatctgacaagttataacatctctgattacctggtgaagacctactcgcagatccttaag
aaaagcataaaaaccaagaagtgggtgaatgaattcagatacggaggtttctccctcggg
ggcagcgccactcagactttatctcaggtccatcatgtcaaagactcgatcattgccatc
aggactcgttatcgagttccgcagaacagttcactggatcatctgctcaacagactgccg
gattttctaggaggactgaacagtcaaaacaatgtcaaggtgtggtacaataacaaagga
tggcattctatggtgtcatttgtcaacgtgatgaacaacggcctgctgagagccagtctg
ccacccggtccagacaggagaaaacacggcatcaccgcctacaaccacccgctcaacctc
accaaggaacaactcacagaaatggccatgatgaccacatcggtggacgttctggtttcc
atctgcgtgatctttgccatgtcctttgttccggcaagcttcgtcctttttctgattgag
gagcgagtcagcaaagccaaacaccttcagtttgtcagcggagtcaaaccgatcctctac
tggctggccaacttcacctgggacatgttgaactacaccgtcccggccaccatggtggtg
ctgatcttcatctgtttccagcagcagtcgtacgtgtcggagaccaacctgcctgctctc
gtcctgctcctcctgttctacgggtggtccatcacccctctgatgtacccagcatccttt
atgttcaccgtccccagcacagcctacgtagtcctgacctccatcaacctcttcatcgga
atcaacggcagcatcgccaccttcgtcctggagctgtttgttgacgagcatctgaacgag
gtgaacaggatcctgaagaaggtgtttctcattttccctcatttctgcctgggacgagga
ctcatcgacatggccaaaaaccaggccatgtcagacgccttccagagactgggcacaaag
cagactcttgaccctcttcagtgggactttgtagggaaaaatctgtttgcgatggcagct
gaaggtgttatcttcttcatcttcaccatactgctgcagtacaagttcttcattcggttc
aggccgtggtgggtcgagcctgagatacctcctcttggtccagaggatgaagacgttgcc
agggagagagagagggtcataagtggcaaagcccaatcagacatcctcaccatgatagac
ctgagcaaggtttataaagcaggcaagatgccggcggtggatcgtctctgcctcgggatt
cctcgtggagagtgttttggcctgctgggggtgaacggagcagggaagacctccaccttt
cgcatgctgaccggagacacagacatcacctacggagaggctttccttaatcaccacagt
gtaatgacagagatggagcgagtccaccagctgatgggttactgtccacagtttgacgcc
atcagcgacctgctgacgggtcgggaacatctggagctgtacgcccgcctgcggggcgtg
tcagaggagtctgtcgcaaaggtggcggagtggggcgtgaagaagctgggactcatccag
tacgctgagcgggaggctggaggctacagcggaggcaacaagagaaaactctccactgcc
atctccctcatcggagctccgcctgttatattcctggatgagcccaccactggcatggac
ccaaaagccaaaaggtttctgtggaactgcatcctcagcgtcaccaaagagggacgagct
gtcgttctcacctcccacagtatggaggaatgtgaggcgctctgcaccagaatggccatc
atggtgaacggcagattccagtgtctcggatctgtacaacacctgaagaacaggtttggt
gatggctacaccatcgtcctccgtctgctggaccctaaatccaacccggactcgtgcccc
gtcagcacctacatgaagagctcttttcccagcatcgagctaaaggagcgccaccagagc
gtgctgcagtaccagctgccctcacacgcctgctgcctggctcgcgtcttcgaagtgctg
gccaacaactacgaggagctgggaatcatcgacttctctgtttcacagaccaccctggac
caggtgtttgtcaactttgccaaagagcagacggatgacgaagtcttcctgaatgtggtc
atcagcaacagaacagtacagatcaacatgagctcacagcgcaccggggttaaccctctc
agcatccaaccacagctgccaatcactcaccctcagccaagcaagaccccgcaacagcat
gagaaatcacctgccagcaaacccaatgagggtaaatcaaaaaagccaaaagctggcaag
gtcaattctaaagaaggcaaagctaatggagagaaaagcagcagtacggcaatgaccaga
atacctcagagagaggagaaggctgagaggacgagccggaggagcagccgcggatcagac
agcagtaacggtggcgttcatggagaaaccagtcaatccagtaaacacagagcagagagc
tccagtaaagatccttctgcactctttatagtcgacagcaacacacaggacagcgcactg
tga
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