Cottoperca gobio: 115006905
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Entry
115006905 CDS
T07513
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgob03009
]
115006905 (ddx10)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115006905 (ddx10)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
90S particles
Helicases
115006905 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SNF2-rel_dom
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
115006905
NCBI-ProteinID:
XP_029285389
Ensembl:
ENSCGOG00000007621
UniProt:
A0A6J2PJ46
LinkDB
All DBs
Position
4:1077925..1083468
Genome browser
AA seq
837 aa
AA seq
DB search
MEKKSSGKKPKPMKMKDGTDPVKNFQKWKKKYNKTKARVKEDRPPKKPEWQVEREYIDRL
VSRYEDINSKEAVRFSDFPISKKTLLGLQGVQYRQPTEIQRQTIGFALLGKDVLGAAKTG
SGKTLAFLIPVLECLYRQQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLII
GGKDIKSESERIHRTNIVICTPGRLLQHMDETATFHASNLHMLVLDEADRILDMGFADTL
NAIVENLPKSRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQSYVVCE
LHQKVNMLYSFIRSHLKKKIIVFFACCKEVQYMFRVLCRLRPGMPILALHGKQQQMKRVE
VYNDFIRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGEAL
LLLLPSEEKGMVGQLHEKKVPINKIQVNPEKLQNIQQKLEAFLAQEKEQKERAQRCFVSY
LRSIYLMKNKEVFDVFKLQIQQYAGSLGLAVAPRVRFLSKAQAKRSVKEGQREEEQSEEE
EDLRSFKAQLKGNVPHEESQSSQSEDSVDDDDDEEGGIEEEVDQSKVLLLGSDDNEDEDD
LRDLDLLTVKRKDVFNLTGGEESPEEPAEDFQKKMEKETKFKEAKKVLKRNFQVNTKVAF
SEEGEAVQLWPPVQRAVTGDGEEEEGLSGINMEKARERLKREDQEFDKQEYRRKVKAKHQ
EKRLKAKAARREASKQHGQKSDDEDEVFAYLANHSEDEFDPSTLPDPDTIHSEEEEDQIT
AAKRQHSSESSDEEEKELTAGKRKKVRQQNDEHKALDTGLSLAEDEELVLHLLGGLR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaatccagcgggaagaaacctaaacccatgaagatgaaagacggcaccgac
cccgtcaaaaacttccagaaatggaagaaaaaatacaacaagacgaaagcacgagtaaag
gaagacaggccaccgaagaagcctgagtggcaggtcgaacgggagtacatcgacaggctt
gttagcaggtatgaagacataaactccaaggaggctgtcaggttttcagacttccccatt
tcaaagaaaaccttgttaggtttgcagggggttcagtacagacagccaacagagatccag
aggcagacaatcggcttcgcattgctcggtaaagatgtcctcggcgcggctaagacaggc
tctgggaagactttggccttcctcataccggtgctggagtgtctgtaccgccagcagtgg
agttccatggacggcctgggtgctctcatcatatcccccaccagagagctcgcctaccag
accttcgaagtcctccgcaaggtgggcaagaaccacgagttctccgcggggctcatcatc
ggcgggaaggacatcaagagtgagtcagagaggatccaccgcaccaacatcgtcatctgc
accccgggccggctgctccagcacatggacgagactgccaccttccacgcctccaacctc
cacatgctagttctggacgaggcagaccgcatcctagatatgggtttcgcggatacactt
aacgccattgtggaaaacctccccaagtcccggcagacgctgctgttctctgccacgcag
accaagtcggtcaaagacctggcccggctcagccttaaagacccagagtacgtgtgggtt
cacgagaaggctaagttcagcacgccggccaccctggagcagagttacgtggtgtgtgag
ctccatcagaaggtcaacatgctctactcgttcatcaggagccatctgaagaagaagatt
attgtcttctttgcctgctgcaaggaggtgcagtacatgttccgggtcctctgtcgcctc
agacccggcatgcccatcttggctttgcatggcaagcagcagcagatgaagagagtggag
gtgtacaatgacttcatccggaagcagaacgctgtgctctttgccaccgacatagccgcc
agaggcctggacttccctgccgtcaactgggtgctgcagtttgactgtccggaggatgca
gacacctacatccacagggtaggccggactgccaggtacaaggaggggggagaagccctc
ctgctcctgctgccctctgaggagaagggcatggttggccagctgcatgagaagaaggtt
cccatcaataagattcaggtgaacccagaaaaactgcagaatattcaacagaagctggag
gccttcctggctcaggagaaggagcagaaggagagagctcagagatgttttgtttcctac
ctgcgctccatctacctgatgaagaacaaagaagtgtttgatgtctttaaactccagatt
cagcagtatgccggttctctgggcctcgcggtggctccgagggtgcgcttcttaagtaaa
gctcaggcaaagagatctgttaaagaagggcagagagaagaggagcagtctgaagaagag
gaggatctgaggagcttcaaggcccagctgaaaggaaatgttcctcatgaggaaagtcag
agctcacagtcagaagattcagttgatgatgatgatgatgaggaaggtggtattgaagaa
gaggtggatcagtccaaggtactacttctgggttcagatgacaacgaggatgaagatgat
ctaagagacttggacctgctgacagtcaaaagaaaagatgtcttcaatctgacggggggc
gaggagagtcctgaggaacctgctgaggacttccaaaagaaaatggaaaaagagacaaag
ttcaaagaagccaaaaaggtccttaagagaaacttccaagtcaacaccaaagtggctttc
agcgaagaaggagaggctgtgcagctgtggcctccagtccaacgagcagtgactggtgat
ggggaggaagaggaggggctttcaggtatcaacatggagaaggccagggagaggctgaaa
cgtgaggaccaggagtttgacaaacaggagtacagacgcaaagtgaaagccaaacaccaa
gagaagaggctgaaggcgaaggcagcgaggagggaggccagtaagcagcacggacagaaa
tctgacgacgaggacgaggtgtttgcttacctggccaatcacagtgaagacgagtttgac
cccagcaccctgccggaccctgacacaatacactctgaggaggaggaggatcagataact
gcagctaaacggcagcacagcagtgaaagcagtgatgaggaagagaaggagctcacagcg
gggaagagaaagaaagtgaggcaacagaatgatgagcacaaagccctggacactggcctg
tctctggctgaagatgaggagttagtcttacatctgctcggagggctgaggtag
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integrated database retrieval system
