KEGG   Cottoperca gobio: 115007424
Entry
115007424         CDS       T07513                                 
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cgob  Cottoperca gobio
Pathway
cgob03030  DNA replication
cgob03410  Base excision repair
cgob03420  Nucleotide excision repair
cgob03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115007424 (rfc4)
   03410 Base excision repair
    115007424 (rfc4)
   03420 Nucleotide excision repair
    115007424 (rfc4)
   03430 Mismatch repair
    115007424 (rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgob03032]
    115007424 (rfc4)
   03036 Chromosome and associated proteins [BR:cgob03036]
    115007424 (rfc4)
   03400 DNA repair and recombination proteins [BR:cgob03400]
    115007424 (rfc4)
DNA replication proteins [BR:cgob03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115007424 (rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    115007424 (rfc4)
Chromosome and associated proteins [BR:cgob03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115007424 (rfc4)
DNA repair and recombination proteins [BR:cgob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115007424 (rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    115007424 (rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_16 AAA_assoc_2 AAA_22 AAA_30 AAA_11 DUF815 Gp44_lid AAA_24 Mg_chelatase AAA_14 SLFN-g3_helicase RuvB_N AAA_19 AAA_5 ResIII Cdc6_lid AAA_3 AAA_28 AAA_7
Other DBs
NCBI-GeneID: 115007424
NCBI-ProteinID: XP_029286147
Ensembl: ENSCGOG00000018469
UniProt: A0A6J2PJC3
LinkDB
Position
4:complement(2039390..2048860)
AA seq 357 aa
MQAFLKGATTRPPKDKAAAAAGPSTEKKAKAIPWVEKYRPKCIDEVAFQEEVVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAAARELYGPHLYRQRVLELNASDERGIQVVREKVKNF
AQLTVAGTRPDGKMCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLANRIQEERLLEICEKEDLKYTKESIAALVKVSEGDLRKAITFLQ
SAARLNVDKEITEHAVIEIAGVIPPKMIDNLLQICLSGTFEKLEVAVRNMVDEGYAATQI
LSQLHESIIEQDLSDKQKSAITEKMAVVAKCLSDGADEYLQMLSLCSVIMQQASQNN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcttttttgaaaggagcgactaccagacctccgaaagacaaggcagcagcagca
gcagggcccagcacagagaagaaagccaaggctattccttgggtagaaaaatacaggcca
aagtgtattgatgaggtggcctttcaggaggaggtggtagcagtgctgaagaagtccctg
gaaggggcagatcttcccaacttgctcttctatggccctcctggaacaggaaagacctcc
accatcttagctgctgccagagaactttatggtcctcacctgtacagacagagggtgctg
gagctcaatgcctcggatgaacgaggcatccaggttgtcagagagaaggtcaagaacttc
gctcagctcaccgtggccgggactcgcccagatgggaagatgtgtcctccttttaagatc
atcatcctggatgaggcggactccatgacggcaccggctcaggctgctctcaggcggacc
atggagaaggagtcccgtaccacccgcttctgcctcatctgtaactacatcagcaggatt
attgagcctctgacctccagatgttccaagtttcgtttcaaacctctagccaatcggatc
caagaagagcgcctgctggagatctgtgagaaggaggacctcaagtacaccaaagagagt
atagcagcattagtgaaggtgtctgagggagacctgcggaaagccataaccttcctccag
agtgctgcgcggctcaacgtcgacaaggagatcacagagcatgctgtcattgaaatagcc
ggggtcattcctcccaagatgattgacaacttgctccagatttgcctttcaggaaccttt
gagaaactagaggttgccgtcaggaacatggtggatgaaggctacgcagccacacagatc
ctgagtcagctccatgagtctatcatagagcaggacctgagtgacaagcagaagtcagcg
ataacagagaagatggcggttgtggctaagtgcctgtcagacggtgcagatgagtacctg
cagatgttgagtctatgttcagtcatcatgcagcaggcctcccagaacaactaa

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