Cottoperca gobio: 115007731 Help Entry 115007731         CDS       T07513                                  Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism cgob  Cottoperca gobio Pathway cgob04510   Focal adhesion cgob04512   ECM-receptor interaction cgob04518   Integrin signaling Brite KEGG Orthology (KO) [BR:cgob00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115007731    04518 Integrin signaling     115007731  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115007731  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cgob00536]     115007731 Glycosaminoglycan binding proteins [BR:cgob00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115007731 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  115007731 NCBI-ProteinID:  XP_029286546 UniProt:  A0A6J2PMJ3 LinkDB All DBs Position 5:20110927..20151133 Genome browser AA seq 1465 aa AA seqDB search MTSHAEGDVFSCTQDGQRYSDKDVWKPEPCRICVCDTGTVLCDEIVCEELKDCTKPEIPF GECCPICAADQSPPIGAPGTKGQKGEPGDITDVVGPRGPGGPLGPPGEQGFRGSRGDKGE KGTLGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGP MGPMGPRGPPGPSGSPGPQGFQGNPGEAGEPGQSGPLGPRGPSGPSGKPGDDGEAGKSGK SGDRGPSGPQGSRGFPGTPGLPGIKGHRGYPGLDGTKGETGAVGSKGESGSSGENGAPGP MGPRGLPGERGRPGPSGVAGARGNDGLHGPAGPPGPVGPSGAPGFPGSPGTKGEAGPTGA RGPEGAQGPRGESGTPGSSGPSGASGNPGTDGISGSKGSAGAPGIAGAPGFPGPRGPPGP QGATGPLGPKGTSGDPGIPGFKGEAGPKGEFGPVGIQGSVGPLGEEGKRGPRGEGGAAGP LGPPGERGSPGNRGFPGQDGLAGPKGAPGERGPAGASGPKGANGDPGRPGESGLPGARGL TGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGL GGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGD QGVPGEAGTAGVTGPRGERGFPGERGAAGPQGLQGPRGLPGTPGTDGPKGAIGPAGTGGA QGPPGLQGMPGERGSSGIPGPKGDRGDLGEKGPEGAPGKDGGRGLTGPIGPPGPGGPNGE KGESGPAGPSGAPGTRGAPGDRGETGPPGPAGFAGPPGSDGQPGIKGEQGESGQKGDAGA PGPQGPSGAPGPAGPTGVFGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGP AGKDGPKGVRGDGGPPGRQGDAGLRGPSGTSGEKGDAGEDGPPGPLGPSGPQGLGGQRGI VGLPGQRGERGFPGLPGPSGEPGKQGAPGGGGDRGPPGPVGPPGLTGPGGELGREGNAGS DGPPGRDGATGVKGDRGITGLAGAPGAPGAHGVNGPVGPTGKQGDRGESGAQGPSGSSGP AGARGMPGPQGPRGDKGDGGESGERGQKGHRGFTGLQGLPGPPGQSGDQGATGPAGPSGQ RGPPGPVGPGGKDGGNGLPGPIGPPGPRGRGGETGPSGPSGNPGPPGLPGPPGPGIDMSA FAGLGQIEKSPDPLRYMRADQASGNLRQHDAEVDATLKSLNNQIENIRSPEGSRKNPART CRDLKLCHPDWKSGDYWVDPNQGCTIDAIKVFCNMETGESCVKSKPASIPRKNWWSSKSK DRKHVWFGETMNGGFHFSYGDDSLAPNTAAIQMTFLRLLSTEASQNLTYHCKNSVAYMDA STGNLKKAVLLQGSNDVEIRAEGNSRFTYSVMEDGCTKHTGQWGKTVIEYRSQKTSRLPI VDIAPMDIGGTDQEFGVEVGAVCFL NT seq 4398 nt NT seq  +upstreamnt  +downstreamnt atgacctcacacgcagagggggatgtttttagctgtacacaagatggacagcgctatagc gacaaggacgtatggaaaccagagccttgtcgcatctgtgtgtgtgacactggaaccgtc ctgtgtgatgaaattgtctgcgaggagctaaaagactgcaccaaacctgaaatcccattc ggagagtgttgccccatctgtgcagctgaccagtctccacccattggagcaccaggaact aagggtcagaaaggtgaacccggagacattacggatgttgtaggaccaagaggaccaggt ggcccactgggcccaccaggagagcaaggattccgaggatcgagaggagataagggagag aagggaacccttggtccccgtggcagagatggtgagcctggcacccccggaaaccccggc ccccctggacccccaggacctaatggaccccctggccttggtggaaactttgctgctcag atggctggtggttttgacgagaaggccggcggcgcgcagatgggtgtgatgcaaggacca atgggccctatgggtcccagaggaccacctggcccctccggatcacctggcccacaaggt ttccaaggcaacccaggagaggctggagagcccggacagtctggccccttgggtccccgt ggcccctctggaccttctggaaaacctggagatgatggtgaggctggcaaatctgggaaa tcaggtgaccgtggaccttctggacctcagggatctcgtggattcccaggaactcctggc ctgcctggcatcaagggacacagaggttatccaggtctcgatgggacaaagggagagact ggagctgttgggtcgaagggcgagtctggttcttccggagagaatggcgctcctggaccc atgggacctcgtggtttgcctggcgagagaggccgccctggacccagtggagttgctggc gcacgtggaaatgatggcttgcacggtcctgctggtccccctggccccgtcggtccctct ggagctccaggcttccctggctctcctggtacaaagggagaagctggtcctactggtgct cgtggacctgagggtgctcagggaccccgtggagagtctggcactcctggatcatccgga ccttccggcgcttctggaaaccctggtactgatggtatctctggatctaaaggatcagct ggtgctcctggtatcgctggtgctcctggtttccctggacctcgtggacctcccgggcct caaggagcaactggacctctcggacccaaaggaacatctggagacccaggtattccaggc tttaagggagaggctggacccaaaggagaatttggaccagttggtattcagggatctgtt ggcccactaggagaagaaggcaagagaggacccaggggtgagggtggtgctgctggacca cttggacctcctggagagagaggatcccccggtaaccgtggtttccctggtcaagacggt ctggctggtcccaagggtgcccctggtgagcgtggacccgctggtgccagtggacccaag ggtgccaatggtgaccctggccgtcctggagagtctggtctcccaggtgccagaggcctg actggacgccccggtgacgctggtcctcaaggcaaagttggaccttctggagcttctggt gaggacggtcgcccaggaccccccggcccacagggagcccgtggacagcctggtgtcatg ggattccccggacccaagggagcaactggtgagcctggcaagtctggagagaaaggactg ggaggagctcctggtctgagaggtctgcccggcaaagatggagaaaccggtgcagctgga ccccccggcccatctggccctgctggcgagagaggagagcaaggacagcctggtccctca ggtttccagggtctgcctggacctcctggcccccctggtgagggaggcaagcccggagac cagggtgttcctggagaggctggaactgctggtgttactggacccagaggagagcgtggt ttccccggagagagaggagcagccggccctcagggtctgcagggacctcgaggtctgcct ggaactcctggaactgacggacccaagggagccattggacctgctggtactggtggagct cagggaccccccggcctgcagggtatgcccggagagagaggatcttccggcattcctgga cccaaaggagacagaggtgaccttggagagaaaggacctgaaggtgctcccggcaaagat ggtggaagaggtctcactggtcccattggtcctcctggacctggtggccccaacggcgag aagggtgaatctggtcctgctggtccttctggagctcctggtacccgcggtgctcctggt gacaggggtgagactggacctcctgggcctgctggatttgctggaccccctggctctgat ggtcagccaggaatcaagggcgagcagggagaatctggacagaagggtgacgctggagcc cctggaccccaaggaccctctggtgcccccggacctgcaggacctaccggtgtttttgga cctaaaggtgctcgtggtgctcagggacctcctggtgccactggtttccctggagctgct ggccgagttggaccccccggtcccaatggtaatcctggacccgctggtcccgccggcccc gctggtaaagatggacccaagggtgtgaggggagatggtggacctccaggcagacagggt gacgctgggctccgcggtccttctgggacttctggagagaagggagatgctggagaggac ggtccccccggtcccctcggtccttcaggtcctcagggtttgggtggtcagcgcggtatc gtcggtctgcccggacagcgtggagagagaggtttccctggtctgcctggaccttctggt gagcccggaaagcagggagctcctggtggcggcggagaccgcggaccccctggacctgtt ggaccacctggactcactggacctggaggagagcttggcagagagggcaacgccggatct gacggacctcctggtagagatggtgctactggagtcaagggtgaccgtggtatcactggt cttgctggagctcctggtgctccgggcgctcatggtgtcaatggcccagtcggccccacc ggcaaacagggagaccgaggagagtctggtgcacaaggaccttctggatcttcaggacct gctggagccagaggaatgcctggaccccaaggaccccgtggtgacaagggtgatggtgga gagtccggtgagcggggacagaagggacacagaggcttcactggtctgcagggtcttcct ggacctccgggtcaatctggagaccagggtgctactggacctgctggaccttctggacaa agaggaccacctggacctgttggccctggtggaaaggatggtggaaacggtctgccagga cccattggaccccccggacctcgtggtcgcggtggagagaccggcccctctggtccatcc ggaaaccccggaccccccggtcttcctggtccccctggccctggcattgacatgtctgcg ttcgctggtctgggtcagattgaaaagtcccctgatcctctcaggtacatgagggccgac caggcttccggaaacctccgtcagcacgatgctgaggtcgacgcaacactcaaatctctc aacaaccagattgagaacatccgcagccccgagggatccagaaagaacccggctcgcacc tgcagagacctgaagctctgccatcctgactggaagagcggtgattactgggttgatccc aatcagggctgcaccatcgatgcaatcaaggtcttctgcaacatggagacaggagagtcc tgcgtcaaatctaagcctgccagcatccctcgcaagaactggtggtccagcaagagcaag gaccgcaaacacgtctggttcggagagacaatgaatggaggattccacttcagctatggt gatgacagcctggcacccaacactgctgccattcagatgactttcctgagactgctgtcc accgaggcatctcagaacctcacctaccactgtaagaacagcgtggcctacatggacgcc tcaacgggcaacctgaagaaggctgtgctgctgcagggctccaacgacgtggagatcaga gccgagggcaacagccgcttcacttacagcgtgatggaagacggctgcacgaaacacacg ggacagtggggcaagacagtgatcgaatacagatcgcagaagacctctcgtctgcccatt gtagacattgcccccatggatattggaggtacagaccaggagtttggagtcgaagtcgga gcagtctgcttcttgtaa

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