KEGG   Cottoperca gobio: 115007814
Entry
115007814         CDS       T07513                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cgob  Cottoperca gobio
Pathway
cgob03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115007814 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgob03400]
    115007814 (aptx)
Enzymes [BR:cgob01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     115007814 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     115007814 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     115007814 (aptx)
DNA repair and recombination proteins [BR:cgob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115007814 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     115007814 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_6 zf-C2H2_4 zf-C2H2_jaz FHA zf-C2H2 zf-met
Other DBs
NCBI-GeneID: 115007814
NCBI-ProteinID: XP_029286665
Ensembl: ENSCGOG00000000316
UniProt: A0A6J2PM45
LinkDB
Position
1:8238563..8242143
AA seq 334 aa
MPICWFISEEANHKPIRLPHLQTVVLGRGPETTIKDRKCSRQQVELKAECNKGYVRVKQL
GLNPTSIDSVVVGKDSEVKMKAGQQLHIVNQLYPYTVQFKEDPIGDHGARTKRRLQPASE
DKERCREAPSVKAAKQTEKVSESIKHGEATKSSESFGHWNQGLKTSMQDSKMQVYKDDKV
VVIKDKYPKARYHWLVLPWQTISSLKVLREEHCALVKHMQQVADQMVQQCPDASSLRFRT
GYHAIPSMSQVHLHVISQDFDSPCLKNKKHWNSFTTDYFMESHDVIQMLETNGRVTVKEG
SSELLKLPLRCHVCRKEFPTIPALKEHLKSHLPS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgccaatttgctggtttatcagtgaggaggccaatcataaacccattcgactgcctcac
ctacagacagttgttctgggtcgaggtccagagacgactattaaagacagaaaatgctct
cggcagcaagttgaattgaaagcagaatgcaacaaaggttatgtcagagttaaacagctg
ggcttgaacccaacctccatagactctgtggtggtgggtaaggacagcgaggtcaaaatg
aaggcaggacagcagcttcatattgtcaatcagctctacccatatactgtacagttcaag
gaggatcctataggggaccatggcgccaggaccaaaagacgtctccagccggcttcagag
gacaaagagcgctgcagagaggctccgagtgtgaaagcagccaaacagacagaaaaggtc
tccgagtcaatcaaacatggagaagccacaaaaagcagtgaaagttttggacattggaac
caaggtctgaagacttcaatgcaagactcaaagatgcaggtgtacaaggatgataaagta
gtagtgatcaaagataaataccccaaagctcgctaccactggctggtcctcccgtggcag
accatttccagcctgaaggtcttacgtgaggagcactgcgccctggtgaaacacatgcag
caagtcgctgaccagatggttcagcagtgcccagatgctagctcgctacgcttccgtaca
gggtaccatgccattcccagtatgagtcaggtacacctgcatgtgatcagccaagacttc
gactctccttgtttaaagaacaaaaagcactggaactcattcacaactgactatttcatg
gagtctcacgatgtcattcagatgcttgaaacaaatggaagagtcaccgtcaaagaagga
agcagcgagttgttgaaactacctctccgctgtcacgtgtgtcgtaaagagtttcccact
ataccagctctgaaggaacacctgaagtctcaccttcccagctga

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