KEGG   Cottoperca gobio: 115007977
Entry
115007977         CDS       T07513                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
cgob  Cottoperca gobio
Pathway
cgob03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    115007977 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115007977 (wdr82)
   03036 Chromosome and associated proteins [BR:cgob03036]
    115007977 (wdr82)
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     115007977 (wdr82)
Chromosome and associated proteins [BR:cgob03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     115007977 (wdr82)
    COMPASS/SET1 complex (yeast)
     115007977 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_HPS5 MinC_C VPS8_N
Other DBs
NCBI-GeneID: 115007977
NCBI-ProteinID: XP_029287030
Ensembl: ENSCGOG00000000843
UniProt: A0A6J2PND4
LinkDB
Position
5:14450536..14455312
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRVLDAFKGAVVHSFVGYNNSKC
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagggttgctaaggtgtttcgagaaaat
tcagacaaaatcaattgttttgacttcagttcaaacggagaaacaattatttccagcagc
gacgacgattccttagttttgtacgactgccaagagggaaaacccaagaggaccctctac
agcaaaaagtatggagtggatttgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgatacgatccggtacctgtctcttcacgacaacaaatacatc
cgctactttcctgggcacaacaaaagagtgacatctctctccatgtctcctgtggacgac
acatttatttctggctcattagataaaacaatcagactctgggatttgcggtcgcccaac
tgccagggtttgatgcacctccaggggaagccagtgtgctcgtttgatccagagggtctt
attttcgctgcaggcataaattcagagatggttaaactttatgatttgcgatcgtttgac
aagggtccatttgcaaccttcaagcttcagtatgaccggacgtgcgagtggacgggactc
aaatttagcaatgacggaaaactcattcttctttctactaatggcggagccctacgggtc
ttagatgcctttaagggtgctgtggtacattcctttgtgggctacaacaacagtaaatgt
gtaacactggaggcatcattcacgccggattctcagtttgttatgattggctccgaggac
ggaaagatccacgtgtggaatgcagaaagcggtatgaaggtggcgttattagacgggaag
cacacgggacccattacctgcctgcagttcaaccccaagttcatgacgtttgcgagtgcc
tgctccaacatggcattctggctcccgaccatcgatgactga

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