Cottoperca gobio: 115008493
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Entry
115008493 CDS
T07513
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115008493
03015 mRNA surveillance pathway
115008493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115008493
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115008493
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115008493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115008493
NCBI-ProteinID:
XP_029287999
Ensembl:
ENSCGOG00000001386
UniProt:
A0A6J2PRP0
LinkDB
All DBs
Position
5:complement(11594311..11599329)
Genome browser
AA seq
530 aa
AA seq
DB search
MATDSWALAVDEQEAAAESIGSLQIKDKPEENGTAAHVAGTTAHVAGTAAHVAGTAAHVA
GTAAHVAGTAAHVAGTVAHVTDSSSAAAKSEVVTENKATDEDDKDDKAAQSLLNKLIRSN
LVSNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMGFNRPSKIQETALPMMLAE
PPQNLIAQSQSGTGKTAAFVLAMLSHVDPNRRYPQCLCVSPTYELALQTGKVIEQMGKHY
PEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCGKFKFIDPKEIMVFVLDEADVMIA
TQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPEPNIIKLKREEETLDTIKQ
YYVLCNCREEKFHSLCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQV
DQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGR
TGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIEQLNTDDLDEIEKIAG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcactggcagtggacgagcaagaagccgcggcggaatcgatc
ggtagccttcaaataaaagataaacctgaggaaaatggcacagctgcacatgtagcaggc
acaactgcacatgtagcaggcacagctgcacatgtagcaggcacagctgcacatgtagca
ggcacagctgcacatgtagcaggcacagctgcacatgtagcaggcacggttgcacatgta
acagactccagcagtgcagctgcaaagtcagaagttgtgacagaaaacaaggctacagat
gaagatgacaaagatgacaaagcagcgcagtcattattgaacaagttaatccggagtaat
cttgtcagtaacacaaatcaagtggaagtgcttcagaaggatcccaactctccgctctac
tcagtcaagtcttttgaggagttgcgacttaaaccacagctgcttcaaggcgtatacggc
atgggtttcaaccggccgtccaaaatccaggagactgccttacctatgatgctagcggaa
cctccacagaatctaattgcacagtcgcagtcgggaacagggaaaacggctgcctttgtc
ctggccatgctcagtcatgtagatcccaacagaagatatccacagtgcctgtgtgtgtca
cccacctatgaactggcacttcagactggcaaggtaatcgagcagatggggaaacactat
cctgaggtcaaactcgtctatgccatcagaggaaataaattgcaacggggcatgaagctg
caggaacagatagtcattgggacgcccggtaccatgctggactggtgcggtaaattcaag
ttcatagaccccaaggagatcatggtgtttgtgcttgacgaggccgacgtcatgatcgcc
acgcagggtcaccaggaccagagcatccgcatccagaggatgctgcctaaaaactgccag
atgttgctgttctcagccacgtttgaagagactgtgtggaactttgcccagcgcattgtg
cccgaacctaacatcatcaagttgaagagagaggaggagacgctggataccatcaaacag
tactacgtgttgtgcaactgcagggaggagaagttccattcactctgtaacatctacgga
gccatcaccatcgcccaggccatgatcttctgccatacaaggaagacggcaggctggctt
gcaggggagctgtccagagaaggccaccaggtggcgctgctcagtggcgagatgcaggtg
gatcagagggctgccgtcatcgaccgcttcagagaaggcaaggagaaggtcctggtcacc
acaaacgtttgtgcccgaggtatcgatgtcgagcaggtttctgtcgtgatcaacttcgac
ttgccagtagacaaggacggtaacccggacaacgagacatacctgcacaggattggccgc
acgggtcgatttggcaaaagaggactggccatcaacatggtggacagcaagatgagcatg
aacatcctcaacaggatccaggagcacttcagtaagaaaattgaacaactaaacacagat
gatctggatgaaattgagaagatcgccggctaa
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