Cottoperca gobio: 115008505
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Entry
115008505 CDS
T07513
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115008505 (ap5b1)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
115008505 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
115008505
NCBI-ProteinID:
XP_029288023
Ensembl:
ENSCGOG00000004800
UniProt:
A0A6J2PPC8
LinkDB
All DBs
Position
5:3050821..3055732
Genome browser
AA seq
949 aa
AA seq
DB search
MAENWADRISAFYRSPSRFLSGTTAEAFLAELLHELRDDRASYSVKVLLLSPLCEYPTLL
CLSDSVGEETALELMSVFVQCPPKSVQFRCHLLLALTSVLVCTSCVSSRSRASQDFLDLL
LQIAQDTSDLHGDSSLRSLRATACDCLRELEACSPGLLSQCLELVGGLRQQETSRLHQAY
AGLHILVLRNAVYQLTQEIGAGAEHLKALLGGNTSGAWEAELDSGLMNNTDSAILSSLIL
GPMGTVPTLQTGPDCKELRSVLSSLLEESYLLTPLCQAALLHRVTEVVAMVPGVSPAVFR
AQLLRLLGTSEVCLLHTTLLMKCAFTDSLFSAEDEAFILQRLVVLCQHPLLSTPEKLFYM
DCILHFPENRPIGFGDGDEALPVLLTPRLASALVPTVFNDSATMLARLNMLSLVYLEEGE
EGEESRGLAYLYEHLTSLLHIVENGGSREIVVTFFRAAYLFLFHFCHVERYFLSLIEKLC
KLYLRHTHLAPHFINLADHTQDKLTESHWAVVFLKALQGFVTEAPLAQLTLQDLRWHLKM
LARVAEEGEIQQQSTLSFLSSVITPSSSSLCVSGDWRLGNSLLGVCRRLLVHPSLDSLLI
PLADVLQHLTCRYGDTDIQDHARLYYTLLTTLSREKLAGVLAQGSTEGGRQVKKRSLSCI
VAESEGLTSMLTIHQTEKTIFRLSEAGPEPQEETQTERDLKQNETGPGEANAALDVYRAQ
FDVPGFASEITLNYQLTHIEATDSHFDQLFSIRLHFNLTDDHYEELSDISVPCLFRERTS
PNVRLRLKPRRPYPTTLHASAIFTTQDGLSWLTELPHIHVAFQQAFLPLPAPPAWGRGRR
LSLFEGLWDEMNSDGGEDLAGGATSLFCCQLKEAALTGLVEKHFLPYLISDVSAKEEFKV
LFFLPPQSHLLLRIRSEDPVHFDIATDNWQLLPHISSYLLAITSSQEDT
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaactgggccgacaggatctctgctttctaccgcagcccgtctcgcttcctc
tccgggacaacagctgaggctttcctcgcagagctgctccatgagctccgagatgacaga
gccagttacagtgtcaaggtcctcctgttgtctccactatgcgagtacccgactctgctg
tgcctctcagactcagtgggtgaggagacagccctggagctcatgtcagtgtttgtccag
tgtcctcccaagtctgtccagtttcgttgtcacctcctcctggccctcacttctgtgcta
gtctgcacctcctgcgtgagcagccgctcccgtgcatctcaagacttcctggacctgctt
cttcagatagcccaggacaccagtgaccttcatggtgacagctctcttcgctctttacgg
gccacagcctgtgactgcctgcgggagctggaggcctgctctccaggccttctctcccag
tgcctcgagctcgtaggtgggctccggcagcaagaaacctcccggctccaccaggcctat
gcagggctccatattctggtgttaagaaacgcagtctatcagctcacccaggaaatagga
gccggtgctgagcatcttaaggctcttctgggaggcaacacatcaggtgcatgggaggca
gagctggactcgggcttgatgaataacacagactcagccatactgtcctctcttatcctg
gggcccatgggcacagtgccgaccctgcagactgggcctgactgtaaggagttgcgttcc
gtgctgtcctccctcctggaggagtcctacctcctcacgcctctgtgtcaggctgcgctg
ctacatagagtgacagaggtggttgccatggtgcctggtgtctctccagctgtattcaga
gctcagctgctgcgactgttgggcaccagcgaggtttgcctccttcacaccactctgctg
atgaagtgtgcgttcacagacagcttgttcagcgccgaagacgaagccttcatcctccag
cggctggtcgtgctctgccagcatcctctgctgagtacacccgagaagcttttctacatg
gactgtatcctgcactttcctgagaaccggccaatcggctttggcgatggggacgaggcc
ctccctgtgctgctgactccgcggctagcctcggctctagtacccacggtgttcaacgac
agcgccaccatgctggcccgactcaacatgctgtctctggtctacctggaggagggggag
gagggagaggagagcagggggctggcctacctctacgaacacctcacctcgctgctgcac
atcgtggaaaacggaggcagccgagagattgtcgtcaccttcttcagagccgcctacctc
ttcctttttcacttctgccacgtggagcgctactttctcagcctgattgagaagctgtgt
aagctctacctccgccacacacacctggctccacacttcatcaacctggccgaccacacc
caggacaagctgactgagtcccactgggctgtggtgttcctgaaggcgctccagggattc
gtcactgaggccccgctcgcccagctcaccttacaagacctgagatggcacctcaagatg
ctggcaagagtggcggaggaaggagaaatccagcagcagagcaccctcagcttcctgtcc
agcgtcatcactccgtcttcctcctctctgtgcgtgagcggcgactggcgtctggggaac
agcctgctgggggtttgccgccgcctcctcgtccaccctagcctggactcgctgctcatc
cctctggctgacgtgctgcagcatctcacctgccgctatggagacacagacatccaggac
cacgcccgcctctactacaccctcctcaccacgctgtccagggagaagctggccggggtt
ttggcgcagggttctaccgagggagggcggcaggtcaagaagcgatcactgtcctgcatc
gtggctgagagcgagggactgacgagcatgctgaccattcaccagacagagaaaaccata
ttcaggctgagtgaggccggtcctgagccacaagaagaaacacaaactgaaagggaccta
aagcagaatgagaccggcccaggagaggcgaatgcagcactggacgtttacagagctcag
tttgacgtccctggctttgcctcagaaatcactttaaactaccagctcactcatattgaa
gcgactgactcccactttgatcagctcttcagcatccgcctccacttcaacctcacagac
gaccactacgaagaactgagcgacatcagtgtcccgtgtctgttcagagagagaacgtca
cccaacgttaggctgagacttaagcccagacggccctaccccaccaccctccacgccagc
gccatcttcaccacccaggacggcctctcctggctcaccgagctgccacacatccacgtg
gcgttccagcaggcctttctgcctctgcccgctccaccggcctggggacgaggccgcaga
ctgagcttgttcgagggtttatgggatgaaatgaactctgatggcggagaggacctggca
ggcggagctaccagcctgttctgctgccagctgaaggaggcagctctgactggcttggtg
gagaaacacttcctcccctaccttatatcagatgtgtccgctaaagaagaattcaaagtg
cttttcttcctcccgccacagtctcacctgctgctgaggatcaggtcggaggatcctgtg
cacttcgacatcgccacagataactggcagcttctgccgcacataagttcttatttactg
gcaatcacatcctcacaggaagacacttga
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