Cottoperca gobio: 115008532
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Entry
115008532 CDS
T07513
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cgob
Cottoperca gobio
Pathway
cgob04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115008532 (shoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
115008532
NCBI-ProteinID:
XP_029288067
Ensembl:
ENSCGOG00000000930
UniProt:
A0A6J2PRW8
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All DBs
Position
1:complement(15971418..15987194)
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AA seq
581 aa
AA seq
DB search
MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALAGLVKDGGKETKTKGNAKEGKKDTSSST
PGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIKE
LTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKL
REIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLI
TLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPR
SLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLN
MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV
CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNN
QLSTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLRSLPFELALCS
KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggaggccaaggctctagctggcttagtcaaagatggtggc
aaagaaacgaagaccaaagggaatgccaaagaaggaaagaaggacaccagcagctcaaca
ccaggtgttgccttctctgttgacaacacgataaagcggccaaacccggcaccaggtacg
cgcaagaagtccagcaatgccgaggtgatcaaagagctcaacaagtgccgggaggagaac
tcgatgagactggacctatctaaacggtccattcacatgctgcccacctccatcaaggaa
ttgacgcagctggctgaactctacttatacagcaacaagctgcagagcctgccggctgag
gtgggttgcctatcaggcctggtcactttggctctgagtgagaactccctgaccagtttg
cctgactccctggactcccttaagaagcttcgaatgctcgacctccggcacaacaagctg
agagagatcccagctgttgtctaccggctgacatctctgaccacgctgtacctgcgcttc
aaccgcatcacaaccgtggagaaggacattcgaaacctatccaagctcactatgctcagc
attcgtgagaacaagattaaacagctgcctgcagagataggggagctatgcaacctcata
actctggatgttgcccataaccagttggagcacctaccgaaggagatcgggaattgcaca
cagataaccaacctcgacttgcagcacaatgagctcttggacctcccagagactataggc
aacctggcaagcataaatcgcttaggtctgcgatacaatagattgtcagccatccccaga
tcattagcccaatgtcgagaactggaggagctaaaccttgaaaacaacaacatttcggtg
ttgccggagggcctactgtcaagtttggtcaacctgaccagtctaacactggcgaggaac
tgcttccagtcataccctgtgggtggaccatcccagttctccaccatctactccctcaac
atggagcacaaccgcatcaacaagatcccctttggcatcttctccagggccaaagtgtta
agcaagcttaacatgaaggacaaccagttaacatctctgccattggactttggcacatgg
acgagcatggtcgagcttaacctggccaccaatcagctgacaaagatcccagaggacgtc
tgtggtttagtctctctggaggtgttaatattgtccaataatcttctcaagaagttacca
cacggtattgggaatttgagaaagctacgggagctcgacttggaggaaaacaagttggaa
tgtttacctaatgaaattgcttatcttaaagatttacagaaattggtgttgacaaataat
cagctgtccacgttgcccagaggcatcggtcacctcaccaacctgactcatcttggtttg
ggggagaacctgctgcaacatctcccagaggagatcggtacactggagaacttggaggaa
ctgtacctcaacgacaaccccaacctgcgcagcctcccgttcgagctggccctctgcagc
aagctgtccatcatgagcatcgagaactgtcccctcagccacctgcctccccagattgtc
gcgggaggcccctccttcatcatccagttcctcaagatgcagggaccgtaccgtgccatg
gtctga
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